Clone Name | rbart59a12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC153386.3| Mus musculus 6 BAC RP23-198D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170561 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 tgagaaaacataaatctgtaa 78 ||||||||||||||||||||| Sbjct: 136305 tgagaaaacataaatctgtaa 136325
>gb|AF000198.2| Caenorhabditis elegans cosmid T28F2, complete sequence Length = 34397 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 agaaaacataaatctgtaaaa 80 ||||||||||||||||||||| Sbjct: 10818 agaaaacataaatctgtaaaa 10798
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctgtgcaaggggggaaaaagc 21 ||||||||||||||||||||| Sbjct: 195191 ctgtgcaaggggggaaaaagc 195211
>gb|AC124689.5| Mus musculus BAC clone RP24-147N6 from chromosome 6, complete sequence Length = 187752 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 tgagaaaacataaatctgtaa 78 ||||||||||||||||||||| Sbjct: 157009 tgagaaaacataaatctgtaa 156989
>gb|AC102635.8| Mus musculus chromosome 16, clone RP23-112K20, complete sequence Length = 204382 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaacataaatctgtaaaa 80 ||||||||||||||||||||| Sbjct: 174019 agaaaacataaatctgtaaaa 174039
>gb|AC078925.18| Homo sapiens 12q BAC RP11-76C10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153284 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 aacagatagagaattcatcca 132 ||||||||||||||||||||| Sbjct: 41614 aacagatagagaattcatcca 41594
>gb|AC108136.14| Homo sapiens chromosome 8, clone RP11-96B2, complete sequence Length = 172124 Score = 42.1 bits (21), Expect = 0.40 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctgta 77 ||||||||||||||||||||| Sbjct: 68181 atgagaaaacataaatctgta 68201
>gb|AC160564.2| Pan troglodytes BAC clone CH251-542C24 from chromosome 5, complete sequence Length = 177047 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aaacataaatctgtaaaaag 82 |||||||||||||||||||| Sbjct: 146006 aaacataaatctgtaaaaag 145987
>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence Length = 211878 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 tccatagtacaccctgccca 111 |||||||||||||||||||| Sbjct: 117786 tccatagtacaccctgccca 117767
>emb|AL162713.19| Human DNA sequence from clone RP11-168P13 on chromosome 13 Contains parts of 2 novel genes and a CpG island, complete sequence Length = 157175 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agaaaacataaatctgtaaa 79 |||||||||||||||||||| Sbjct: 102149 agaaaacataaatctgtaaa 102130
>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial sequence Length = 236303 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 agagcataatgagaaaacat 68 |||||||||||||||||||| Sbjct: 37498 agagcataatgagaaaacat 37517
>gb|AC018398.10| Homo sapiens chromosome 8, clone RP11-16G12, complete sequence Length = 191377 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cataaatctgtaaaaagctggaca 89 ||||||||||||||||| |||||| Sbjct: 109391 cataaatctgtaaaaagatggaca 109368
>gb|AC011835.8| Homo sapiens chromosome 8, clone RP11-143D15, complete sequence Length = 182151 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 cataaatctgtaaaaagctggaca 89 ||||||||||||||||| |||||| Sbjct: 24803 cataaatctgtaaaaagatggaca 24780
>gb|AC091970.3| Homo sapiens chromosome 5 clone RP11-509B9, complete sequence Length = 170119 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aaacataaatctgtaaaaag 82 |||||||||||||||||||| Sbjct: 18063 aaacataaatctgtaaaaag 18044
>gb|AC026432.4| Homo sapiens chromosome 5 clone CTD-2228C1, complete sequence Length = 113194 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 aaacataaatctgtaaaaag 82 |||||||||||||||||||| Sbjct: 15264 aaacataaatctgtaaaaag 15283
>gb|AC069255.18|AC069255 Homo sapiens 3 BAC RP11-568N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184151 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaagctggacaactccata 97 |||||||||||||||||||| Sbjct: 175300 aaaagctggacaactccata 175319
>gb|AC010885.8| Homo sapiens BAC clone RP11-368K23 from 2, complete sequence Length = 177385 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 aagctggacaactccatagtacac 103 |||||||||||||| ||||||||| Sbjct: 81662 aagctggacaactctatagtacac 81685
>gb|AC005234.1| Homo sapiens BAC clone RP11-436H22 from 2, complete sequence Length = 190753 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 aaaagctggacaactccata 97 |||||||||||||||||||| Sbjct: 87177 aaaagctggacaactccata 87196
>gb|AC027332.4|AC027332 Homo sapiens chromosome 5 clone CTD-2193I13, complete sequence Length = 155150 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 aaacataaatctgtaaaaag 82 |||||||||||||||||||| Sbjct: 151208 aaacataaatctgtaaaaag 151189
>gb|AC007378.4| Homo sapiens BAC clone RP11-78I14 from 2, complete sequence Length = 179357 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 agagcataatgagaaaacat 68 |||||||||||||||||||| Sbjct: 141665 agagcataatgagaaaacat 141646
>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome Length = 1308759 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaaa 81 |||||||||||||||||||| Sbjct: 521811 aaaacataaatctgtaaaaa 521830
>gb|U43375.1| Caenorhabditis elegans cosmid K09C4, complete sequence Length = 35444 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aatgagaaaacataaatctg 75 |||||||||||||||||||| Sbjct: 27859 aatgagaaaacataaatctg 27878
>emb|AL837516.14| Mouse DNA sequence from clone RP23-234L8 on chromosome 2, complete sequence Length = 202046 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cctgcccaaacagatagaga 123 |||||||||||||||||||| Sbjct: 4897 cctgcccaaacagatagaga 4878
>emb|X07677.1|CEHSP2PS Caenorhabditis elegans hsp-2ps gene Length = 1926 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aatgagaaaacataaatctg 75 |||||||||||||||||||| Sbjct: 996 aatgagaaaacataaatctg 1015
>ref|NM_128176.2| Arabidopsis thaliana calmodulin binding AT2G26180 mRNA, complete cds Length = 1366 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 1151 aaaaagcacaagccaagtt 1169
>ref|NM_179743.1| Arabidopsis thaliana CYP711A1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G26170 (CYP711A1) transcript variant AT2G26170.2 mRNA, complete cds Length = 2127 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 2092 aaaaagcacaagccaagtt 2074
>ref|NM_128175.2| Arabidopsis thaliana CYP711A1; heme binding / iron ion binding / monooxygenase/ oxygen binding AT2G26170 (CYP711A1) transcript variant AT2G26170.1 mRNA, complete cds Length = 2020 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 1985 aaaaagcacaagccaagtt 1967
>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence Length = 253001 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 59 gagaaaacataaatctgta 77 ||||||||||||||||||| Sbjct: 237311 gagaaaacataaatctgta 237329
>gb|AC148460.2| Xenopus tropicalis clone CH216-3L17, complete sequence Length = 194144 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 cataatgagaaaacataaa 71 ||||||||||||||||||| Sbjct: 70793 cataatgagaaaacataaa 70811
>gb|AC146432.3| Pan troglodytes BAC clone RP43-19M2 from 7, complete sequence Length = 177888 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 50957 aaaacataaatctgtaaaa 50975
>gb|AC005078.1| Homo sapiens BAC clone CTA-252K19 from 7, complete sequence Length = 73231 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 72928 aaaacataaatctgtaaaa 72910
>ref|XM_744618.1| Aspergillus fumigatus Af293 riboflavin kinase (Afu2g05820) partial mRNA Length = 645 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 acaactccatagtacaccc 105 ||||||||||||||||||| Sbjct: 200 acaactccatagtacaccc 182
>gb|AC023483.5| Homo sapiens chromosome 3 clone RP11-453A3 map 3p, complete sequence Length = 171051 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 14 gaaaaagcacaagccaagttcag 36 |||||||||||||| |||||||| Sbjct: 29537 gaaaaagcacaagctaagttcag 29559
>gb|AC018822.8| Homo sapiens chromosome 3 clone RP11-324K15 map 3p, complete sequence Length = 189995 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 14 gaaaaagcacaagccaagttcag 36 |||||||||||||| |||||||| Sbjct: 28539 gaaaaagcacaagctaagttcag 28517
>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence Length = 167364 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 6311 ataatgagaaaacataaat 6293
>gb|AC093714.2| Homo sapiens BAC clone RP11-458K10 from 7, complete sequence Length = 142751 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 75502 ataatgagaaaacataaat 75484
>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a calponin 2 (CNN2) pseudogene, a novel zinc finger pseudogene, a pseudogene similar to part of cytochrome P450, subfamily IVF, a chromosome 2 open reading frame 14 (C2orf14) pseudogene, a pseudogene similar to part of sorting nexin associated golgi protein 1 (SNAG1), a melanoma antigen (LOC51152) pseudogene, four novel pseudogenes and an ankyrin repeat domain 20A (ANKRD20A) pseudogene, complete sequence Length = 149891 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 cagatagagaattcatcca 132 ||||||||||||||||||| Sbjct: 131353 cagatagagaattcatcca 131371
>emb|AL646099.4| Human DNA sequence from clone RP11-65B7 on chromosome 13q13.3-14.2, complete sequence Length = 106772 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 29 aagttcagtcttcttcttg 47 ||||||||||||||||||| Sbjct: 69515 aagttcagtcttcttcttg 69533
>gb|AC158963.3| Mus musculus chromosome 1, clone RP23-321A12, complete sequence Length = 203604 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 94 catagtacaccctgcccaaacag 116 |||||||||| |||||||||||| Sbjct: 88623 catagtacactctgcccaaacag 88601
>gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, complete sequence Length = 253402 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 97430 aaaacataaatctgtaaaa 97448
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a pseudogene similar to part of a novel protein (DKFZp434A171), a pseudogene similar to part of meprin A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene similar to part of a novel transmembrane receptor protein and two novel pseudogenes, complete sequence Length = 189495 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 114 cagatagagaattcatcca 132 ||||||||||||||||||| Sbjct: 15325 cagatagagaattcatcca 15343
>gb|AC090577.4| Homo sapiens chromosome 8, clone RP11-575N24, complete sequence Length = 162391 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 75677 aaaacataaatctgtaaaa 75695 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 74613 aaaacataaatctgtaaaa 74631
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25, complete sequence Length = 181165 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 ggggggaaaaagcacaagc 27 ||||||||||||||||||| Sbjct: 27341 ggggggaaaaagcacaagc 27323
>gb|AC008122.15| Homo sapiens 2q31-33 BAC RPCI11-1021H16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104140 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 93333 atgagaaaacataaatctg 93315
>gb|AC090680.11| Homo sapiens 12 BAC RP11-87P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183896 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 70932 aaaacataaatctgtaaaa 70950
>gb|AC113406.2| Homo sapiens chromosome 5 clone RP11-471O19, complete sequence Length = 147183 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 cataatgagaaaacataaa 71 ||||||||||||||||||| Sbjct: 69920 cataatgagaaaacataaa 69938
>gb|AC114964.2| Homo sapiens chromosome 5 clone RP11-275B7, complete sequence Length = 171025 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 cataatgagaaaacataaa 71 ||||||||||||||||||| Sbjct: 154463 cataatgagaaaacataaa 154481
>gb|AC004747.3| Arabidopsis thaliana chromosome 2 clone T19L18 map B68, complete sequence Length = 87080 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 847 aaaaagcacaagccaagtt 865
>gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map B68, complete sequence Length = 82212 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 76620 aaaaagcacaagccaagtt 76638
>gb|AC067843.16| Homo sapiens chromosome 8, clone RP11-645E10, complete sequence Length = 187559 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 ccaagttcagtcttcttct 45 ||||||||||||||||||| Sbjct: 18863 ccaagttcagtcttcttct 18845
>gb|AC100800.2| Homo sapiens chromosome 8, clone RP11-161I2, complete sequence Length = 196849 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 134374 aaaacataaatctgtaaaa 134356
>gb|AC090420.6| Homo sapiens chromosome 8, clone RP11-346L6, complete sequence Length = 216706 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 73502 aaaacataaatctgtaaaa 73484
>gb|AC023955.11| Homo sapiens chromosome 8, clone RP11-153B5, complete sequence Length = 160905 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 ccaagttcagtcttcttct 45 ||||||||||||||||||| Sbjct: 19364 ccaagttcagtcttcttct 19346
>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence Length = 198958 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 ccaagttcagtcttcttct 45 ||||||||||||||||||| Sbjct: 6508 ccaagttcagtcttcttct 6526
>gb|AC020982.6| Homo sapiens chromosome 5 clone RP1-255M24, complete sequence Length = 137703 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 cataatgagaaaacataaa 71 ||||||||||||||||||| Sbjct: 85139 cataatgagaaaacataaa 85121
>gb|AC012312.9| Homo sapiens chromosome 5 clone CTC-558O19, complete sequence Length = 181226 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 8708 aaaacataaatctgtaaaa 8690
>gb|AC004985.2| Homo sapiens PAC clone RP5-1165K10 from 7, complete sequence Length = 159507 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 81673 atgagaaaacataaatctg 81691
>gb|AC002059.3| Homo sapiens Chromosome 22q12 PAC Clone p704f1059q13 In Meningioma Deletion Region, complete sequence Length = 173029 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 tcagtcttcttcttggaga 51 ||||||||||||||||||| Sbjct: 121397 tcagtcttcttcttggaga 121379
>emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 in linkage group 10, complete sequence Length = 247227 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 agagcataatgagaaaaca 67 ||||||||||||||||||| Sbjct: 157775 agagcataatgagaaaaca 157793
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 25768599 atgagaaaacataaatctg 25768617 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 25717241 atgagaaaacataaatctg 25717259 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 25003516 atgagaaaacataaatctg 25003534
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 25023842 ataatgagaaaacataaat 25023860
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 25642901 ataatgagaaaacataaat 25642883
>emb|BX818988.1|CNS0A82U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1444 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 1136 aaaaagcacaagccaagtt 1154
>gb|AC093767.2| Homo sapiens BAC clone RP11-107E21 from 4, complete sequence Length = 149505 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tgtgcaaggggggaaaaag 20 ||||||||||||||||||| Sbjct: 108040 tgtgcaaggggggaaaaag 108022
>gb|AC146038.2| Pan troglodytes BAC clone RP43-96B12 from chromosome 7, complete sequence Length = 189363 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 172940 aaaacataaatctgtaaaa 172922
>gb|BT002794.1| Arabidopsis thaliana clone RAFL14-97-O09 (R20188) At2g26180 mRNA, complete sequence Length = 1534 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 15 aaaaagcacaagccaagtt 33 ||||||||||||||||||| Sbjct: 1147 aaaaagcacaagccaagtt 1165
>gb|AC022077.20| Homo sapiens 3 BAC RP11-34I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158176 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 46 tggagagcataatgagaaa 64 ||||||||||||||||||| Sbjct: 19724 tggagagcataatgagaaa 19706
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 89707 ataatgagaaaacataaat 89689
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 170504 ataatgagaaaacataaat 170486
>emb|AL844187.13| Zebrafish DNA sequence from clone DKEY-221D18 in linkage group 16, complete sequence Length = 168637 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctgtaaa 79 |||||||||||| |||||||||| Sbjct: 135850 atgagaaaacatcaatctgtaaa 135872
>dbj|AP005000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0042D01 Length = 148305 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 36830 ataatgagaaaacataaat 36848
>emb|CR628405.8| Zebrafish DNA sequence from clone CH211-170A5 in linkage group 10, complete sequence Length = 75121 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 agagcataatgagaaaaca 67 ||||||||||||||||||| Sbjct: 50720 agagcataatgagaaaaca 50702
>emb|AL954831.17| Zebrafish DNA sequence from clone DKEY-12H9 in linkage group 20, complete sequence Length = 230844 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 aaaacataaatctgtaaaa 80 ||||||||||||||||||| Sbjct: 44920 aaaacataaatctgtaaaa 44902
>gb|AC131084.13| Mus musculus chromosome 1, clone RP23-450D2, complete sequence Length = 208140 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 94 catagtacaccctgcccaaacag 116 |||||||||| |||||||||||| Sbjct: 129425 catagtacactctgcccaaacag 129403
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 25696775 atgagaaaacataaatctg 25696793 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 25645417 atgagaaaacataaatctg 25645435 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 24931722 atgagaaaacataaatctg 24931740
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 135837 atgagaaaacataaatctg 135855 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 84479 atgagaaaacataaatctg 84497
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 atgagaaaacataaatctg 75 ||||||||||||||||||| Sbjct: 103651 atgagaaaacataaatctg 103633
>gb|AC138365.16| Mus musculus chromosome 5, clone RP23-262B5, complete sequence Length = 172631 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 63 aaacataaatctgtaaaaa 81 ||||||||||||||||||| Sbjct: 140813 aaacataaatctgtaaaaa 140831
>emb|AL808123.9| Mouse DNA sequence from clone RP23-73K21 on chromosome 2, complete sequence Length = 158637 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 aaggggggaaaaagcacaa 25 ||||||||||||||||||| Sbjct: 66302 aaggggggaaaaagcacaa 66320
>gb|AC122767.16| Mus musculus chromosome 7, clone RP24-143L4, complete sequence Length = 192484 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 cttcttggagagcataatg 59 ||||||||||||||||||| Sbjct: 97210 cttcttggagagcataatg 97192
>emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chromosome 2, complete sequence Length = 156705 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 tgcaaggggggaaaaagca 22 ||||||||||||||||||| Sbjct: 114787 tgcaaggggggaaaaagca 114805
>emb|AL672184.13| Mouse DNA sequence from clone RP23-421G11 on chromosome X, complete sequence Length = 211206 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 aggggggaaaaagcacaag 26 ||||||||||||||||||| Sbjct: 25998 aggggggaaaaagcacaag 25980
>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete sequence Length = 220275 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 ataatgagaaaacataaat 72 ||||||||||||||||||| Sbjct: 170022 ataatgagaaaacataaat 170004
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 cataaatctgtaaaaagct 84 ||||||||||||||||||| Sbjct: 56013 cataaatctgtaaaaagct 55995 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,596,232 Number of Sequences: 3902068 Number of extensions: 1596232 Number of successful extensions: 117923 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117565 Number of HSP's gapped (non-prelim): 358 length of query: 132 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 111 effective length of database: 17,151,101,840 effective search space: 1903772304240 effective search space used: 1903772304240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)