Clone Name | rbart59a11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC008255.9| Drosophila melanogaster clone BACR48D17, complete sequence Length = 183316 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 ccctccattccacacaactgg 95 ||||||||||||||||||||| Sbjct: 160499 ccctccattccacacaactgg 160479
>gb|BC012434.1| Mus musculus cDNA clone IMAGE:3711007, **** WARNING: chimeric clone **** Length = 3220 Score = 42.1 bits (21), Expect = 0.72 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agacaataagacagcagctctgatg 159 ||||||||||||||||||| ||||| Sbjct: 523 agacaataagacagcagctttgatg 499
>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 0.72 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agacaataagacagcagctctgatg 159 ||||||||||||||||||| ||||| Sbjct: 223392 agacaataagacagcagctttgatg 223368
>dbj|AK084288.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230018E09 product:unclassifiable, full insert sequence Length = 3068 Score = 42.1 bits (21), Expect = 0.72 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agacaataagacagcagctctgatg 159 ||||||||||||||||||| ||||| Sbjct: 1324 agacaataagacagcagctttgatg 1300
>gb|AC018488.7|AC018488 Drosophila melanogaster, chromosome X, region 13A-13B, BAC clone BACR09F03, complete sequence Length = 165118 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccctccattccacacaactgg 95 ||||||||||||||||||||| Sbjct: 154487 ccctccattccacacaactgg 154507
>gb|AE003498.5| Drosophila melanogaster chromosome X, section 50 of 74 of the complete sequence Length = 341520 Score = 42.1 bits (21), Expect = 0.72 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccctccattccacacaactgg 95 ||||||||||||||||||||| Sbjct: 155242 ccctccattccacacaactgg 155262
>gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, complete sequence Length = 192097 Score = 42.1 bits (21), Expect = 0.72 Identities = 24/25 (96%) Strand = Plus / Minus Query: 135 agacaataagacagcagctctgatg 159 ||||||||||||||||||| ||||| Sbjct: 71749 agacaataagacagcagctttgatg 71725
>gb|AC161281.2| Pan troglodytes BAC clone CH251-392N12 from chromosome 7, complete sequence Length = 159549 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 atcaaaaatatacaaggaac 210 |||||||||||||||||||| Sbjct: 87540 atcaaaaatatacaaggaac 87559
>gb|AC079760.6| Homo sapiens BAC clone RP11-142A5 from 7, complete sequence Length = 129808 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 atcaaaaatatacaaggaac 210 |||||||||||||||||||| Sbjct: 66464 atcaaaaatatacaaggaac 66445
>emb|AL391260.13| Human DNA sequence from clone RP11-328B14 on chromosome 10, complete sequence Length = 172771 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 acactcatgtagtctgctca 135 |||||||||||||||||||| Sbjct: 12376 acactcatgtagtctgctca 12357
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 tttccgatcaaaaatatacaagga 208 ||||||||||||||||| |||||| Sbjct: 1715936 tttccgatcaaaaatattcaagga 1715913
>emb|CR378667.1| Photobacterium profundum SS9; segment 5/12 Length = 349080 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgatcaaaaatatacaagg 207 |||||||||||||||||||| Sbjct: 235795 ccgatcaaaaatatacaagg 235814
>gb|AF409100.1| Photobacterium profundum strain SS9 methyl-accepting chemotaxis protein gene, partial cds; putative steroid dehydrogenase, putative acyl-CoA ligase, putative haloalkane dehalogenase, and 3-oxoacyl-acyl carrier protein synthase III (fabH) genes, complete cds; eicosapentaenoic fatty acid biosynthetic gene cluster pfa, complete sequence; alkaline serine protease gene, complete cds; formyltetrahydrofolate deformylase (purU) gene, partial cds; and unknown genes Length = 33099 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgatcaaaaatatacaagg 207 |||||||||||||||||||| Sbjct: 31888 ccgatcaaaaatatacaagg 31869
>gb|AC114796.3| Homo sapiens BAC clone RP11-700B17 from 4, complete sequence Length = 39786 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 atcaaaaatatacaaggaac 210 |||||||||||||||||||| Sbjct: 25492 atcaaaaatatacaaggaac 25473
>gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, complete sequence Length = 212309 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ggagatgggacactgcaaat 113 |||||||||||||||||||| Sbjct: 51869 ggagatgggacactgcaaat 51850 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,691,614 Number of Sequences: 3902068 Number of extensions: 1691614 Number of successful extensions: 110522 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110483 Number of HSP's gapped (non-prelim): 39 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)