ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart59a06 |
|---|---|
| Clone Library Name | barley_pub |
>STA_RICCO (Q10710) Sugar carrier protein A| Length = 522 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/43 (46%), Positives = 28/43 (65%) Frame = -2 Query: 385 LLLPETKQVPIEEIWLLFDKHWYWKRIVTKDPKYQGHHQRQEI 257 + LPETK VPIEE+ L+ KHW+WK+IV P+ + E+ Sbjct: 471 IFLPETKGVPIEEMIFLWRKHWFWKKIVPGQPEVDDSRESMEM 513
>STP14_ARATH (Q8GW61) Sugar transport protein 14 (Hexose transporter 14)| Length = 504 Score = 47.8 bits (112), Expect = 6e-06 Identities = 19/27 (70%), Positives = 24/27 (88%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIV 302 LLPETKQVPIEE++LL+ +HW WK+ V Sbjct: 473 LLPETKQVPIEEVYLLWRQHWLWKKYV 499
>STP7_ARATH (O04249) Sugar transport protein 7 (Hexose transporter 7)| Length = 513 Score = 47.0 bits (110), Expect = 1e-05 Identities = 18/27 (66%), Positives = 24/27 (88%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIV 302 LLPETK VPIEE+ LL+ KHW+WK+++ Sbjct: 472 LLPETKGVPIEEMTLLWSKHWFWKKVL 498
>STP10_ARATH (Q9LT15) Sugar transport protein 10 (Hexose transporter 10)| Length = 514 Score = 45.8 bits (107), Expect = 2e-05 Identities = 18/36 (50%), Positives = 26/36 (72%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIVTKDPKYQGH 275 LLPETK VPIEE+ ++ +HW+WK+ + +D GH Sbjct: 473 LLPETKGVPIEEMGRVWKQHWFWKKYIPEDAIIGGH 508
>STP3_ARATH (Q8L7R8) Sugar transport protein 3 (Hexose transporter 3)| Length = 514 Score = 45.4 bits (106), Expect = 3e-05 Identities = 17/30 (56%), Positives = 25/30 (83%) Frame = -2 Query: 385 LLLPETKQVPIEEIWLLFDKHWYWKRIVTK 296 L LPETK VPIE++ L++KHW+W+R+ +K Sbjct: 474 LFLPETKNVPIEKVVGLWEKHWFWRRMTSK 503
>HUP3_CHLKE (Q39525) H(+)/hexose cotransporter 3| Length = 534 Score = 44.3 bits (103), Expect = 7e-05 Identities = 16/29 (55%), Positives = 23/29 (79%) Frame = -2 Query: 388 ILLLPETKQVPIEEIWLLFDKHWYWKRIV 302 I LLPETK VPIE + L+ +HW+WK+++ Sbjct: 474 IFLLPETKGVPIERVQALYARHWFWKKVM 502
>HUP1_CHLKE (P15686) H(+)/hexose cotransporter 1| Length = 534 Score = 43.5 bits (101), Expect = 1e-04 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = -2 Query: 388 ILLLPETKQVPIEEIWLLFDKHWYWKRIV 302 I LLPETK VPIE + L+ +HW+W R++ Sbjct: 474 IFLLPETKGVPIERVQALYARHWFWNRVM 502
>STP5_ARATH (Q93Y91) Sugar transport protein 5 (Hexose transporter 5)| Length = 506 Score = 42.4 bits (98), Expect = 3e-04 Identities = 13/27 (48%), Positives = 23/27 (85%) Frame = -2 Query: 388 ILLLPETKQVPIEEIWLLFDKHWYWKR 308 I+ LPETK +P++ ++ +++KHWYW+R Sbjct: 473 IMFLPETKGIPVDSMYQVWEKHWYWQR 499
>HEX6_RICCO (Q07423) Hexose carrier protein HEX6| Length = 510 Score = 42.4 bits (98), Expect = 3e-04 Identities = 15/30 (50%), Positives = 26/30 (86%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIVTKD 293 LLPETK+VPIE++ +++ HW+WK+I+ ++ Sbjct: 470 LLPETKKVPIEKMDIVWRDHWFWKKIIGEE 499
>STP1_ARATH (P23586) Sugar transport protein 1 (Hexose transporter 1) (Glucose| transporter) Length = 522 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/34 (50%), Positives = 24/34 (70%) Frame = -2 Query: 385 LLLPETKQVPIEEIWLLFDKHWYWKRIVTKDPKY 284 + LPETK +PIEE+ ++ HWYW R V +D +Y Sbjct: 472 IFLPETKGIPIEEMGQVWRSHWYWSRFV-EDGEY 504
>STP4_ARATH (Q39228) Sugar transport protein 4 (Hexose transporter 4)| Length = 514 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = -2 Query: 385 LLLPETKQVPIEEIWLLFDKHWYWKRIVTKDPKYQGHHQRQE 260 L+LPETK VPIEE+ ++ HW+W + + + G + Q+ Sbjct: 470 LMLPETKNVPIEEMNRVWKAHWFWGKFIPDEAVNMGAAEMQQ 511
>STC_RICCO (Q41144) Sugar carrier protein C| Length = 523 Score = 40.4 bits (93), Expect = 0.001 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = -2 Query: 379 LPETKQVPIEEIWLLFDKHWYWKRIVTKD 293 LPETK +PIEE+ ++ +HWYW R V + Sbjct: 476 LPETKGIPIEEMGQVWKQHWYWSRYVVDE 504
>STP12_ARATH (O65413) Sugar transport protein 12 (Hexose transporter 12)| Length = 508 Score = 38.5 bits (88), Expect = 0.004 Identities = 15/28 (53%), Positives = 20/28 (71%) Frame = -2 Query: 385 LLLPETKQVPIEEIWLLFDKHWYWKRIV 302 L LPET+ VPIEE+ ++ HWYW + V Sbjct: 470 LFLPETRGVPIEEMNRVWRSHWYWSKFV 497
>STP13_ARATH (Q94AZ2) Sugar transport protein 13 (Hexose transporter 13)| (Multicopy suppressor of snf4 deficiency protein 1) Length = 526 Score = 37.0 bits (84), Expect = 0.011 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%) Frame = -2 Query: 388 ILLLPETKQVPIEEIW-LLFDKHWYWKRIV 302 + LLPETK +PIEE+ ++ KHW+W R + Sbjct: 470 MFLLPETKNIPIEEMTERVWKKHWFWARFM 499
>STP9_ARATH (Q9SX48) Sugar transport protein 9 (Hexose transporter 9)| Length = 517 Score = 37.0 bits (84), Expect = 0.011 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIVTKD 293 LLPETK VPIEE+ ++ +H +WKR + D Sbjct: 474 LLPETKGVPIEEMGRVWKQHPFWKRYMPDD 503
>HUP2_CHLKE (Q39524) H(+)/hexose cotransporter 2 (Galactose-H+ symporter)| Length = 540 Score = 37.0 bits (84), Expect = 0.011 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = -2 Query: 379 LPETKQVPIEEIWLLFDKHWYWKRIV 302 LPETK VP+E + +F +HW W R++ Sbjct: 479 LPETKGVPVETVPTMFARHWLWGRVM 504
>STP11_ARATH (Q9FMX3) Sugar transport protein 11 (Hexose transporter 11)| Length = 514 Score = 34.7 bits (78), Expect = 0.057 Identities = 15/30 (50%), Positives = 20/30 (66%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYWKRIVTKD 293 LLPETK VPIEE+ ++ +H YW + D Sbjct: 474 LLPETKGVPIEEMGKVWKEHRYWGKYSNND 503
>STP8_ARATH (Q9SBA7) Sugar transport protein 8 (Hexose transporter 8)| Length = 507 Score = 32.7 bits (73), Expect = 0.22 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%) Frame = -2 Query: 388 ILLLPETKQVPIEE----IWLLFDKHWYWKRIVTKDPKY 284 + +PETK V I++ +W L HWYWKR + ++ ++ Sbjct: 465 LFFVPETKGVSIDDMRDSVWKL---HWYWKRFMLEEDEH 500
>QUTD_EMENI (P15325) Quinate permease (Quinate transporter)| Length = 533 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 382 LLPETKQVPIEEIWLLFDKHWYW 314 L+PETK VP+E + LFDK W Sbjct: 474 LIPETKGVPLESMETLFDKKPVW 496
>LEU3_PSEAE (Q51375) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 360 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = -3 Query: 90 RVQLGFDLSEGVIGGTGYEMQKHG 19 R QLGF+L+E VIGG + KHG Sbjct: 31 RFQLGFELAEDVIGGAA--IDKHG 52
>STP6_ARATH (Q9SFG0) Sugar transport protein 6 (Hexose transporter 6)| Length = 507 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -2 Query: 379 LPETKQVPIEEIW-LLFDKHWYWKRIVTKDPKYQGHHQR 266 +PETK + I+++ ++ HW+WKR + + + +R Sbjct: 467 IPETKGIAIDDMRESVWKPHWFWKRYMLPEDDHHDIEKR 505
>ARNT_WIGBR (Q8D339) Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose| arabinosyl transferase (EC 2.-.-.-) (Undecaprenyl phosphate-alpha-L-Ara4N transferase) (4-amino-4-deoxy-L-arabinose lipid A transferase) Length = 562 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -2 Query: 379 LPETKQVPIEEIWLLFDKHWYWKRIVTKDPKYQGHHQR 266 L + K+ I + LL DKH+ WK+ + K H+R Sbjct: 517 LSKNKEKKISLVMLLPDKHYNWKKFNVPETKKFFQHER 554
>GLGA_SYNEL (Q8DKU2) Glycogen synthase (EC 2.4.1.21) (Starch [bacterial| glycogen] synthase) Length = 474 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 8/53 (15%) Frame = +3 Query: 216 DSDVATGLTXXXXXIS--WRW------WCPWYFGSLVTIRFQYQCLSKSSHIS 350 D D+ T T WRW WCPWY T+ Q + + +S Sbjct: 142 DPDITTVFTIHNLAYQGPWRWRLEQITWCPWYMQGHNTMAAALQYADRVNTVS 194
>QUEF_VIBF1 (Q5E7A3) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)| Length = 281 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +1 Query: 85 NS*ELRTPSLGQEHTHTHTYEP 150 N+ EL++ +LGQ+ + HTYEP Sbjct: 6 NADELKSLTLGQKTEYKHTYEP 27 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,777,587 Number of Sequences: 219361 Number of extensions: 754088 Number of successful extensions: 2061 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2010 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2053 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
