Clone Name | rbart59a02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ZN566_PANTR (Q6J6I6) Zinc finger protein 566 | 29 | 3.0 | 2 | ZN566_HUMAN (Q969W8) Zinc finger protein 566 | 29 | 3.0 | 3 | DXR_PSEU2 (Q4ZWS2) 1-deoxy-D-xylulose 5-phosphate reductoisomera... | 28 | 6.8 |
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>ZN566_PANTR (Q6J6I6) Zinc finger protein 566| Length = 418 Score = 29.3 bits (64), Expect = 3.0 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 9 YRKSTLGLSHHSFHTNHQPKSFEELRQQTNY 101 Y +S+ +SHH HT+ +P + E + NY Sbjct: 376 YSQSSQLISHHRIHTSEKPYEYRECGKNFNY 406
>ZN566_HUMAN (Q969W8) Zinc finger protein 566| Length = 418 Score = 29.3 bits (64), Expect = 3.0 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 9 YRKSTLGLSHHSFHTNHQPKSFEELRQQTNY 101 Y +S+ +SHH HT+ +P + E + NY Sbjct: 376 YSQSSQLISHHRIHTSEKPYEYRECGKNFNY 406
>DXR_PSEU2 (Q4ZWS2) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 396 Score = 28.1 bits (61), Expect = 6.8 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -3 Query: 135 HLPVTSVEFCACNLFVVSTLQNSLAGDWYERNG 37 H PVT+VE +F LAG W+ER+G Sbjct: 364 HEPVTAVEGLEA-VFAADAKARLLAGQWFERHG 395 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,431,368 Number of Sequences: 219361 Number of extensions: 370729 Number of successful extensions: 1129 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1129 length of database: 80,573,946 effective HSP length: 34 effective length of database: 73,115,672 effective search space used: 1754776128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)