ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart58h11 |
|---|---|
| Clone Library Name | barley_pub |
>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)| Length = 508 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 Query: 88 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 302 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 349
>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)| (Fragment) Length = 353 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 Query: 88 HTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 H Q H H H H+ ++P HQ+S HP A+ + A Q+ Sbjct: 147 HPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQVSPATQQ 194
>IPPD_MOUSE (Q60829) Dopamine- and cAMP-regulated neuronal phosphoprotein| (DARPP-32) Length = 194 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 243 QEEDGASLTASGRRWAAARRPSWGRGLRGP 332 +EED + G R ++P+ GRGL GP Sbjct: 126 EEEDSQAEVLKGSRGTVGQKPTCGRGLEGP 155
>IRS1_DROME (Q9XTN2) Insulin receptor substrate 1 (Protein Chico) (dIRS)| Length = 968 Score = 28.9 bits (63), Expect = 3.3 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +1 Query: 61 KKLKMD---TVVHTQATVSPIHIHKHIHTPRISYPKWHQSSSHPEE 189 +KLK+ T AT +P+H I T IS KW + S EE Sbjct: 663 EKLKLSDYQTAPPLTATAAPVHDLNKISTYNISAEKWREQPSRSEE 708
>IPPD_BOVIN (P07516) Dopamine- and cAMP-regulated neuronal phosphoprotein| (DARPP-32) Length = 202 Score = 28.5 bits (62), Expect = 4.3 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = +3 Query: 243 QEEDGASLTASGRRWAAARRPSWGRGLRGP 332 +EED + G R +A ++ ++G+GL GP Sbjct: 131 EEEDSQAEVLKGSRGSAGQKTTYGQGLEGP 160
>YLA4_CAEEL (Q05036) Hypothetical protein C30C11.4 in chromosome III| Length = 776 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -1 Query: 336 EQAPSTPAPKKDDEQQPTGGQKP 268 ++ P+ PAP K +E QP G +P Sbjct: 744 KKKPAAPAPPKKEEPQPAAGDQP 766
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = +3 Query: 90 HPGYSLPNSHTQAHTYPSDQLP 155 HP + +P SH Q YP Q+P Sbjct: 461 HPQFMVPPSHQQQQAYPPPQMP 482
>UVP1_ECOLI (P18957) Protein uvp1| Length = 198 Score = 28.5 bits (62), Expect = 4.3 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = +3 Query: 96 GYSLPNSHTQAHTYPSDQLPKMAPKQLTP*RIGSSG-RRAGNGVARI--CIMQEEDGASL 266 GY+ ++H Q T+ D+L K +Q+ +I G +RA NG + C+ +G +L Sbjct: 4 GYARKSTHLQDVTHQVDELTKAGCEQIYHEQISRGGSKRAKNGAPELENCLKALREGDTL 63 Query: 267 TASGRRWAAAR 299 WA R Sbjct: 64 VV----WALDR 70
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 207 RAGNGVARICIMQEEDGASLTASGRRWA 290 +A NG AR+ + GAS+TAS + W+ Sbjct: 595 KAVNGAARLFVFNNATGASVTASVKIWS 622
>DOK2_HUMAN (O60496) Docking protein 2 (Downstream of tyrosine kinase 2)| (p56(dok-2)) Length = 412 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 334 AGPLNPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRP 200 A P P+PQ A+ RP++ P S TP+PA RP Sbjct: 248 AAPATPQPQPATIPASLPRPDSPYSRPHDSLPPPSPTTPVPAPRP 292
>CLDND_MOUSE (Q9CQX5) Claudin domain-containing protein 1| Length = 253 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -3 Query: 238 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 116 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>CLDND_HUMAN (Q9NY35) Claudin domain-containing protein 1 (Membrane protein| GENX-3745) Length = 253 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Frame = -3 Query: 238 IHILATPLPALRPELPILQ-GVSCFGAILGS*SEGYVCACVC 116 I +L T L + LP + G+ CFGA++G +CAC+C Sbjct: 129 IDLLRTYLWRCQFLLPFVSLGLMCFGALIG------LCACIC 164
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = +1 Query: 115 HIHKHIHTPRISYPKWHQSSSH--PEESAARGAEQAMA 222 H H H H P S+P+ Q+ +H P A+ GA A Sbjct: 59 HSHSHPHQPIPSHPQEQQAKNHCSPSHQASGGATAGAA 96
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 27.7 bits (60), Expect = 7.4 Identities = 29/105 (27%), Positives = 38/105 (36%), Gaps = 24/105 (22%) Frame = -3 Query: 277 PEAVRLAPSSSCIIHILATPLPALRPE----LPILQGVSCF------------------- 167 P+A + P SC + P P PE +P Q +C Sbjct: 912 PQAGQCCPQYSCACNTSRCPAPVGCPEGARAIPTYQEGACCPVQNCSWTVCSINGTLYQP 971 Query: 166 GAILGS*SEGYVC-ACVCELGRL*PGCVPRCPFSVFCFIFLCRTH 35 GA++ S +C C CEL PG P F V C +C TH Sbjct: 972 GAVVSS----SLCETCRCEL----PGGPPSDAFVVSCETQICNTH 1008
>GLAS_DROVI (Q24732) Protein glass| Length = 598 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +1 Query: 94 QATVS-PIHIHKHIHTPRISYPKWHQSSSHPEESAARGAEQAM 219 QA++S +H H+ + +P S + QSS+HP + ++ +QA+ Sbjct: 179 QASLSYTVHPHQMLISPNGSQQQQSQSSTHPHQLQSQHMQQAL 221
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 27.7 bits (60), Expect = 7.4 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 334 AGPLNPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELP 191 +GPL P P R + R A PS S + + P P L P+ P Sbjct: 376 SGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRP 423
>AFLR_ASPPA (P43651) Aflatoxin biosynthesis regulatory protein| Length = 444 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +3 Query: 90 HPGYSLPNSHTQAHTY 137 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 27.7 bits (60), Expect = 7.4 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = +3 Query: 90 HPGYSLPNSHTQAHTY 137 H YS P++HTQAHT+ Sbjct: 96 HNTYSTPHAHTQAHTH 111
>ORAI1_RAT (Q5M848) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 139 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 255 P +SYP W S S + QA++W++ L + K+ Sbjct: 49 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 87
>ORAI1_MOUSE (Q8BWG9) Protein orai-1| Length = 304 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 139 PRISYPKWHQSSSHPEESAARGAEQAMAWQEYVLCKKKM 255 P +SYP W S S + QA++W++ L + K+ Sbjct: 50 PAVSYPDWIGQSYSEVMSLNEHSMQALSWRKLYLSRAKL 88
>HEY1_CANFA (Q9TSZ2) Hairy/enhancer-of-split related with YRPW motif 1 (Hairy| and enhancer of split related 1) (HESR-1) Length = 304 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = -3 Query: 334 AGPLNPRPQEGRRAAAHRRPEAVRLAPSSSCIIHILATPLPALRPELPILQGVSCFGA 161 A P +P Q GR AAAH A+R AP S + +L A + P+L V+ A Sbjct: 208 ASPTDPHHQ-GRLAAAHPEAPALR-APPSGGLGPVLPVVTSASKLSPPLLSSVASLSA 263
>TBCD4_HUMAN (O60343) TBC1 domain family member 4 (Akt substrate of 160 kDa)| (AS160) Length = 1298 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +3 Query: 18 SSCLDICVR----HKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPSDQLPKMA 164 SS +D C+ H++ + K + RG PG L + P D LP+ A Sbjct: 219 SSLIDDCMEKFSLHEQQRLKIQGEQRGPDPGEDLADLEVVVPGSPGDCLPEEA 271
>TEGU_HCMV (P07387) Tegument protein (67 kDa phosphorylated protein)| Length = 549 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +3 Query: 27 LDICVRHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPS 143 +D C K ++ + R T SLPN++TQ H +PS Sbjct: 334 IDRCEFVGKKRRCMMHNDRETGDCSSLPNANTQTHRFPS 372
>IL1B_CEREL (P51745) Interleukin-1 beta precursor (IL-1 beta)| Length = 266 Score = 27.3 bits (59), Expect = 9.7 Identities = 9/15 (60%), Positives = 12/15 (80%) Frame = +1 Query: 145 ISYPKWHQSSSHPEE 189 + YP W+ S+SHPEE Sbjct: 228 VLYPNWYISTSHPEE 242
>FLGH_BURPS (Q63YB2) Flagellar L-ring protein precursor (Basal body L-ring| protein) Length = 240 Score = 27.3 bits (59), Expect = 9.7 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -3 Query: 319 PRPQEGRRAAAHRRPEAVRLAPSSSCII--------HILATPLPALRPELPILQ 182 P+P RAAA RRP A LA ++ + I P+ A+ P P +Q Sbjct: 8 PQPARRARAAAARRPGAAALAAAALALAGCAQIPREPITQQPMSAMPPMPPAMQ 61
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 27.3 bits (59), Expect = 9.7 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 3/86 (3%) Frame = +3 Query: 84 GTHPGYSLPNSHTQAHTYPSDQLPKMAPKQLTP*RIGSSGRRAGNGVARICIMQEEDGAS 263 G++P YS P++ + P Q + G++A G+ + ++ GA Sbjct: 435 GSYPEYSSPSAPPPPPSQPQSQAAAAGA--------AAGGQQAAAGMG----LGKDMGAQ 482 Query: 264 LTASGRRWAAARR---PSWGRGLRGP 332 A+ WAAA++ P+ G GP Sbjct: 483 YAAASPAWAAAQQRSHPAMSPGTPGP 508
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 327 PSTPAPKKDDEQQPTGGQKPS 265 PS P+P K QQPT G+ P+ Sbjct: 296 PSLPSPSKPPIQQPTPGKPPA 316
>ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13| Length = 958 Score = 27.3 bits (59), Expect = 9.7 Identities = 16/64 (25%), Positives = 25/64 (39%) Frame = +3 Query: 138 PSDQLPKMAPKQLTP*RIGSSGRRAGNGVARICIMQEEDGASLTASGRRWAAARRPSWGR 317 P P PK + P + +SGR+ G + I + A R+++A GR Sbjct: 442 PIVSAPSSEPKHMPPPSVAASGRKTGQAASENAIASSNSASPRPAPIARYSSAFSHRRGR 501 Query: 318 GLRG 329 G Sbjct: 502 PSSG 505
>RL32_METKA (Q8TW13) 50S ribosomal protein L32e| Length = 131 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +3 Query: 42 RHKKMKQKTENGHRGTHPGYSLPNSHTQAHTYPSDQLPKMAPKQL 176 RH KM++K ++ + +PGY P H +++ PK L Sbjct: 49 RHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDL 93
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 61 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 232 YVLCKK 249 Y KK Sbjct: 2278 YEAEKK 2283
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 61 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 232 YVLCKK 249 Y KK Sbjct: 2278 YEAEKK 2283
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 61 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2222 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2277 Query: 232 YVLCKK 249 Y KK Sbjct: 2278 YEAEKK 2283
>ATG5_NEUCR (Q872C6) Autophagy protein 5| Length = 397 Score = 27.3 bits (59), Expect = 9.7 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = -1 Query: 327 PSTPAPKKDDEQQP--TGGQKPSG*HHLL 247 PS+P+P D+QQP GG SG + ++ Sbjct: 295 PSSPSPPSSDQQQPQRPGGSSSSGSYRVM 323
>FUBP2_HUMAN (Q92945) Far upstream element-binding protein 2 (FUSE-binding| protein 2) (KH type splicing regulatory protein) (KSRP) (p75) Length = 707 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +1 Query: 148 SYPKWHQSSSH-PEESAARGAEQAMAWQEY 234 +YP+W + H P ++AA A+ AW Y Sbjct: 548 TYPQWQPPAPHDPSKAAAAAADPNAAWAAY 577
>ATRX_MOUSE (Q61687) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked nuclear protein) (Heterochromatin protein 2) (HP1 alpha-interacting protein) (HP1-BP38 protein) Length = 2476 Score = 27.3 bits (59), Expect = 9.7 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +1 Query: 61 KKLKMDTVVHTQATVSP--IHIHK-HIHTPRISYPKWHQSSSHPEESAARGAEQAMAWQE 231 KK K DT + + T+ + IHK HI + Y + H EE E+ AW E Sbjct: 2205 KKKKRDTPMLPKDTILAELLQIHKEHI----VGYHEHDSLLDHKEEEELTEEERKAAWAE 2260 Query: 232 YVLCKK 249 Y KK Sbjct: 2261 YEAEKK 2266
>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2| Length = 769 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/29 (34%), Positives = 14/29 (48%) Frame = +1 Query: 148 SYPKWHQSSSHPEESAARGAEQAMAWQEY 234 +YP+W + H AA A+ AW Y Sbjct: 609 TYPQWQPPAPHDPSKAAAAADPNAAWAGY 637 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,128,195 Number of Sequences: 219361 Number of extensions: 1290224 Number of successful extensions: 4100 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3910 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4100 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
