ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLK8_RAT (P36374) Prostatic glandular kallikrein-8 precursor (EC... 28 7.7
2ESTA_CANFA (P09582) Arginine esterase precursor (EC 3.4.21.35) 28 7.7
3TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4 28 7.7

>KLK8_RAT (P36374) Prostatic glandular kallikrein-8 precursor (EC 3.4.21.35)|
           (Tissue kallikrein) (P1 kallikrein) (RGK-8)
          Length = 261

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 127 WRVYFGHCFSLNCEIWVKYRNLYD 56
           W +   HC+S+N ++W+   NL +
Sbjct: 59  WVITAAHCYSVNYQVWLGRNNLLE 82



to top

>ESTA_CANFA (P09582) Arginine esterase precursor (EC 3.4.21.35)|
          Length = 260

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 127 WRVYFGHCFSLNCEIWVKYRNL 62
           W +   HC + NCE+W+   NL
Sbjct: 59  WVLTAAHCANSNCEVWLGRHNL 80



to top

>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 121 VYFGHCFSLNCEIWVKY 71
           V FG CF LNC IW K+
Sbjct: 406 VVFGICFVLNCFIWGKH 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,320,957
Number of Sequences: 219361
Number of extensions: 399284
Number of successful extensions: 738
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top