>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence
          Length = 180227

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   tgagctgtcatacattgcat 197
             ||||||||||||||||||||
Sbjct: 49408 tgagctgtcatacattgcat 49389

>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete
              sequence
          Length = 139074

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     catacattttgagtagcagc 104
              ||||||||||||||||||||
Sbjct: 118393 catacattttgagtagcagc 118412

>gb|AC005195.1| Homo sapiens chromosome 5, P1 clone 1265G12 (LBNL H58), complete
             sequence
          Length = 71668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 69784 tattttctctacatacattt 69803

>gb|AC004632.1| Homo sapiens chromosome 5, BAC clone 18f2 (LBNL H125), complete
             sequence
          Length = 24494

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 23667 tattttctctacatacattt 23648

>gb|AC133876.8| Mus musculus chromosome 5, clone RP23-190E15, complete sequence
          Length = 187088

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     tttctctacatacattttga 96
              ||||||||||||||||||||
Sbjct: 151331 tttctctacatacattttga 151312

>gb|AC114986.13| Mus musculus chromosome 1, clone RP23-242G7, complete sequence
          Length = 195146

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 68   tgggtgtattttctctacatacat 91
            ||||||||||||||| ||||||||
Sbjct: 4691 tgggtgtattttctccacatacat 4714

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 85       catacattttgagtagcagc 104
                ||||||||||||||||||||
Sbjct: 28034714 catacattttgagtagcagc 28034695

>gb|AC146459.3| Pan troglodytes BAC clone CH251-229E22 from Y, complete sequence
          Length = 191428

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 40402 tattttctctacatacattt 40383

>gb|AC182696.2| Populus trichocarpa clone Pop1-69I10, complete sequence
          Length = 92421

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   ttttgagtagcagccaattt 110
            ||||||||||||||||||||
Sbjct: 6940 ttttgagtagcagccaattt 6959

>gb|AC147477.1| Pan troglodytes BAC clone CH251-483E9 from Y, complete sequence
          Length = 213500

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     tattttctctacatacattt 93
              ||||||||||||||||||||
Sbjct: 187865 tattttctctacatacattt 187846

>emb|AL133520.5| Human DNA sequence from clone RP1-101A2 on chromosome 20, complete
             sequence
          Length = 47325

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 15022 tattttctctacatacattt 15041

>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12
          Length = 286550

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    gagcgcatcgtcgcttgcca 175
              ||||||||||||||||||||
Sbjct: 205129 gagcgcatcgtcgcttgcca 205110

>gb|AC004859.3| Homo sapiens PAC clone RP4-691F11 from 7, complete sequence
          Length = 145442

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 96477 tattttctctacatacattt 96458

>gb|AC116385.5| Mus musculus chromosome 5, clone RP23-17A11, complete sequence
          Length = 217711

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tttctctacatacattttga 96
             ||||||||||||||||||||
Sbjct: 18553 tttctctacatacattttga 18534

>emb|AL592294.15| Human DNA sequence from clone RP3-475G16 on chromosome 1 Contains the
             5' end of one variant of the ZSWIM5 gene for zinc finger
             SWIM domain containing 5 and four CpG islands, complete
             sequence
          Length = 177710

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 52784 tattttctctacatacattt 52765

>emb|AL022327.17|HS355C18 Human DNA sequence from clone RP3-355C18 on chromosome 22q13.3 Contains
             the KIAA0027 gene, ESTs, STSs, GSSs and seven putative CpG
             islands, complete sequence
          Length = 101270

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    atgtattatttcattcacat 29
             ||||||||||||||||||||
Sbjct: 51727 atgtattatttcattcacat 51746

>gb|AC090651.3| Homo sapiens chromosome 15 clone RP11-344A16 map 15q21.3, complete
              sequence
          Length = 208230

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 223    cactcactgtatacatgcca 242
              ||||||||||||||||||||
Sbjct: 112999 cactcactgtatacatgcca 113018

>dbj|BS000617.1| Pan troglodytes chromosome Y clone:PTB-206A19, complete sequences
          Length = 169081

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     tattttctctacatacattt 93
              ||||||||||||||||||||
Sbjct: 142316 tattttctctacatacattt 142335

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 74       tattttctctacatacattt 93
                ||||||||||||||||||||
Sbjct: 14944866 tattttctctacatacattt 14944847

>gb|AC069421.9| Homo sapiens 3 BAC RP11-528A4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 157289

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   cgtggccactcactcactgt 232
             ||||||||||||||||||||
Sbjct: 42281 cgtggccactcactcactgt 42262

>gb|AC079175.24| Homo sapiens Xp BAC RP11-122N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163198

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gtattttctctacatacatt 92
             ||||||||||||||||||||
Sbjct: 93168 gtattttctctacatacatt 93149

>gb|AC099503.2| Homo sapiens chromosome 5 clone RP11-213D23, complete sequence
          Length = 22974

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 16997 tattttctctacatacattt 16978

>gb|AC025916.5| Homo sapiens chromosome 15 clone CTD-2323M6 map 15q21.3, complete
            sequence
          Length = 109403

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 223  cactcactgtatacatgcca 242
            ||||||||||||||||||||
Sbjct: 9230 cactcactgtatacatgcca 9249

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 85       catacattttgagtagcagc 104
                ||||||||||||||||||||
Sbjct: 28126038 catacattttgagtagcagc 28126019

>gb|AC157523.2| Pan troglodytes BAC clone CH251-526G6 from chromosome unknown, complete
             sequence
          Length = 165776

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    tattttctctacatacattt 93
             ||||||||||||||||||||
Sbjct: 92365 tattttctctacatacattt 92384

>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     tattttctctacatacattt 93
              ||||||||||||||||||||
Sbjct: 151124 tattttctctacatacattt 151143

>gb|AC009494.2|AC009494 Homo sapiens BAC clone RP11-450B24 from Y, complete sequence
          Length = 188314

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     tattttctctacatacattt 93
              ||||||||||||||||||||
Sbjct: 122702 tattttctctacatacattt 122721

>gb|AF114156.1|AF114156 Homo sapiens Y-linked zinc finger protein (ZFY) gene, complete cds
          Length = 135849

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   tattttctctacatacattt 93
            ||||||||||||||||||||
Sbjct: 6583 tattttctctacatacattt 6602

>emb|CT476801.2| RP43-004N07, complete sequence
          Length = 182257

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gtattttctctacatacatt 92
             ||||||||||||||||||||
Sbjct: 9983  gtattttctctacatacatt 10002

>emb|CR972866.3| RP43-009N23, complete sequence
          Length = 201804

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gtattttctctacatacatt 92
             ||||||||||||||||||||
Sbjct: 33720 gtattttctctacatacatt 33739

>gb|AC125134.3| Mus musculus BAC clone RP24-316C22 from 1, complete sequence
          Length = 188348

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    tgggtgtattttctctacatacat 91
             ||||||||||||||| ||||||||
Sbjct: 54333 tgggtgtattttctccacatacat 54356


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,776,616
Number of Sequences: 3902068
Number of extensions: 2776616
Number of successful extensions: 49684
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49595
Number of HSP's gapped (non-prelim): 89
length of query: 343
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 321
effective length of database: 17,147,199,772
effective search space: 5504251126812
effective search space used: 5504251126812
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)