Clone Name | rbart58h04 |
---|---|
Clone Library Name | barley_pub |
>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)| Length = 471 Score = 56.2 bits (134), Expect = 2e-08 Identities = 27/31 (87%), Positives = 28/31 (90%) Frame = -3 Query: 369 VCNIRAGTCSATKNSPLSVKALKRTLAMRNT 277 VCN RAGTCSA+KNSPLSVKALKRTLA NT Sbjct: 434 VCNTRAGTCSASKNSPLSVKALKRTLAKLNT 464
>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)| Length = 458 Score = 44.3 bits (103), Expect = 7e-05 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = -3 Query: 369 VCNIRAGTCSATKNSPLSVKALKRTLAMRN 280 +CN++ GTC K+SPL+VKALKRTLA N Sbjct: 416 ICNVQQGTCLMAKDSPLAVKALKRTLAKPN 445
>CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase precursor (EC| 3.4.22.-) (Fragment) Length = 346 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/41 (51%), Positives = 26/41 (63%) Frame = -3 Query: 369 VCNIRAGTCSATKNSPLSVKALKRTLAMRNTA*SRRGKAVS 247 +CN+R GTCS +K +PL VKA+KR LA A GK S Sbjct: 305 ICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGGKKSS 345
>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)| Length = 462 Score = 37.0 bits (84), Expect = 0.012 Identities = 16/24 (66%), Positives = 19/24 (79%) Frame = -3 Query: 369 VCNIRAGTCSATKNSPLSVKALKR 298 VC++ GTC +KNSP SVKALKR Sbjct: 424 VCDLDQGTCLLSKNSPFSVKALKR 447
>LCE3B_HUMAN (Q5TA77) Late cornified envelope protein 3B (Late envelope protein| 14) Length = 95 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 7/64 (10%) Frame = +3 Query: 198 CRREKSSTQPHPSIPP*T--PLSLDDFMP-----CYASPGCASKPSRSAGCSWSLSKSQP 356 C++ + QP P P P S +P C PGC PS GC S + Sbjct: 3 CQQNQQQCQPLPKCPSPKCPPKSSAQCLPPASSCCAPRPGCCGGPSSEGGCCLSHHR--- 59 Query: 357 *CCR 368 CCR Sbjct: 60 -CCR 62
>CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1)| Length = 490 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -3 Query: 369 VCNIRAGTCSATKNSPLSVK 310 VCN +A TCS +KNSP +++ Sbjct: 444 VCNAKARTCSKSKNSPYNIR 463
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = +3 Query: 213 SSTQPHPSIPP*TPLSLDD--FMPC---YASPGCASKPSRSAGCSWSLSKSQ 353 SST HPS PP P L D F P Y S G + P S G ++ S Q Sbjct: 39 SSTHSHPSNPPPPPTRLHDRSFKPVSKNYESEGRLTPPPVSMGYRYARSSKQ 90
>HUTU_STRCO (Q9KZ75) Urocanate hydratase (EC 4.2.1.49) (Urocanase)| (Imidazolonepropionate hydrolase) Length = 572 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -2 Query: 316 REGFEAHPGDA*HGMKSSRE 257 REG EAH GDA HG ++RE Sbjct: 549 REGDEAHEGDAAHGSGAARE 568
>KRA53_HUMAN (Q6L8H2) Keratin-associated protein 5-3 (Keratin-associated protein| 5.3) (Ultrahigh sulfur keratin-associated protein 5.3) (Keratin-associated protein 5-9) (Keratin-associated protein 5.9) (UHS KerB-like) Length = 238 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 270 FMPCYASPGCASKPSRSAGCSWSLSKSQP*CCR 368 + PC S GC S +S+ C S S+S CC+ Sbjct: 132 YKPCCCSSGCGSSCCQSSCCKPSCSQSS--CCK 162
>MSRAB_TREPA (O83641) Peptide methionine sulfoxide reductase msrB/msrA (EC| 1.8.4.6) [Includes: Peptide methionine sulfoxide reductase msrB; Peptide methionine sulfoxide reductase msrA (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase)] Length = 291 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 185 RFVGVQEGEKLHTAASFYSTLDTAFPRRLHAVLRI 289 RFV +EG L A F+ST A+ RR+ VLR+ Sbjct: 120 RFVAREEGTALFAAGCFWST--EAYFRRVKGVLRV 152
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 28.1 bits (61), Expect = 5.4 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +3 Query: 276 PCYASPGCASKPSRSAGCSWSLSKSQ---P*CCR 368 PCY S GC S +S+ C S++ P CC+ Sbjct: 93 PCYCSSGCGSSCCQSSCCKPCCSQASCCVPICCQ 126
>Y1690_HAEIN (P45320) Hypothetical sodium-dependent transporter HI1690| Length = 457 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/71 (28%), Positives = 35/71 (49%) Frame = +2 Query: 149 YTKAMSGLNFEQRFVGVQEGEKLHTAASFYSTLDTAFPRRLHAVLRIARVRFKAFTLSGL 328 ++ +G F F G+ L T+ + Y + TA +L R+ R + TLSG+ Sbjct: 308 FSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKL----RMCRGKAIVLTLSGI 363 Query: 329 FLVAEQVPALM 361 FL+ +PA++ Sbjct: 364 FLLG-NIPAIL 373
>MOK11_SCHPO (Q09854) Cell wall alpha-1,3-glucan synthase mok11 (EC 2.4.1.183)| Length = 2397 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 114 CSLYISLLLHVFIVHSSLPFVLVLS 40 CS+YIS L +I+HS +P + LS Sbjct: 2009 CSVYISASLFWYILHSLVPNIYALS 2033
>SMOC2_MOUSE (Q8CD91) SPARC-related modular calcium-binding protein 2 precursor| (Secreted modular calcium-binding protein 2) (SMOC-2) Length = 447 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +1 Query: 181 TKVCWCAGGRKAPHSRILLFHLRHRFPSTTSCRVTHRQGA 300 T CWC P S + H R P + + +V R+GA Sbjct: 128 TGYCWCVTPNGRPISGTAVAHKTPRCPGSINEKVPQREGA 167
>PRGR_RABIT (P06186) Progesterone receptor (PR)| Length = 930 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +3 Query: 225 PHPSIPP*TPLSLDDFMPCYASPGCASKPSRSAGCS 332 P PS+PP P S ASPG AS S S+ S Sbjct: 422 PPPSLPPRVPSSRPGEAAVAASPGSASVSSSSSSGS 457 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,774,040 Number of Sequences: 219361 Number of extensions: 889324 Number of successful extensions: 2179 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 2138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2178 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)