Clone Name | rbart58g07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY589579.1| Triticum aestivum beta-expansin TaEXPB2 mRNA, complete cds Length = 897 Score = 232 bits (117), Expect = 6e-58 Identities = 154/166 (92%), Gaps = 9/166 (5%) Strand = Plus / Minus Query: 216 gataccaaatctagccaatgtatgcatatgattccaaatgatga-------tgagttcag 268 ||||||||||| |||||||| |||||| ||||||||||||||| | ||||||| Sbjct: 895 gataccaaatcaagccaatgcatgcat--gattccaaatgatgagttcggttcagttcag 838 Query: 269 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 778 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 732
>gb|AY543536.1| Triticum aestivum expansin EXPB1 mRNA, complete cds Length = 810 Score = 210 bits (106), Expect = 2e-51 Identities = 106/106 (100%) Strand = Plus / Minus Query: 269 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 751 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 705
>gb|AY543538.1| Triticum aestivum expansin EXPB3 mRNA, complete cds Length = 834 Score = 208 bits (105), Expect = 9e-51 Identities = 111/113 (98%) Strand = Plus / Minus Query: 262 agttcagcagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagtt 321 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 823 agttcagcagcttcagctgtactggacgatggaacggtagaaggtgctgggcgcccagtt 764 Query: 322 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 763 ggccgggatgaccttgtcggccaccagcgacttgccggactcgttggtgatgc 711
>gb|AY543537.1| Triticum aestivum expansin EXPB2 mRNA, complete cds Length = 948 Score = 133 bits (67), Expect = 4e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 882 ttcagctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatga 823 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 |||||| ||| || ||||||||||||||||||||| Sbjct: 822 ccttgttggcgacgagcgtcttgccggactcgttg 788
>gb|AY111405.1| Zea mays CL5426_1 mRNA sequence Length = 528 Score = 125 bits (63), Expect = 1e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 |||||||| |||||| |||||| ||||| |||| ||||||||||||||||||||| || Sbjct: 263 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 322 Query: 340 ggccaccagcgtcttgccggactcgttggtgatgc 374 ||||||||||||||||||||||||||||||||||| Sbjct: 323 ggccaccagcgtcttgccggactcgttggtgatgc 357
>emb|AJ295942.1|FPR295942 Festuca pratensis mRNA for beta expansin B3 (expB3 gene) Length = 1219 Score = 123 bits (62), Expect = 4e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 269 cagcttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccggg 328 |||| ||||||| |||||||||||||||||||| ||| |||||| ||||| ||||||||| Sbjct: 911 cagcctcagctgaactggacgatggagcggtaggaggcgctgggggcccaattggccggg 852 Query: 329 atgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||| ||||||||| || ||| ||||||||||||||||||||||| Sbjct: 851 atgatcttgtcggcgacgagctgcttgccggactcgttggtgatgc 806 Score = 54.0 bits (27), Expect = 3e-04 Identities = 43/48 (89%), Gaps = 4/48 (8%) Strand = Plus / Minus Query: 109 tattcaagacacacatgca----cgacgacgcctacatgacacccgac 152 |||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1072 tattgaagacacacatgcaggatcgacgacgcctacatgacacccgac 1025 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 acacacaaacagtaataacttatgat 30 |||||||||| ||||||||||||||| Sbjct: 1186 acacacaaactgtaataacttatgat 1161
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4 (OSJNBa0010C11.2), mRNA Length = 1340 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 969 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 910 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 909 cgttgttggcgacgagcgtcttgccggactcgttg 875
>gb|AF261272.1| Oryza sativa beta-expansin (EXPB4) mRNA, complete cds Length = 1249 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 925 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 866 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 865 cgttgttggcgacgagcgtcttgccggactcgttg 831
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 16771 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 16712 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 16711 cgttgttggcgacgagcgtcttgccggactcgttg 16677 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 4068 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 4127 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 4128 gctggcgacgagctgcttgccggactcgttggtgatgc 4165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 21341758 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21341699 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 21341698 cgttgttggcgacgagcgtcttgccggactcgttg 21341664 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 21329054 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21329113 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 21329114 gctggcgacgagctgcttgccggactcgttggtgatgc 21329151 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21311303 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21311362 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 21311363 tgttggcgacgagcgtcttgccgga 21311387 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 21317205 ccagttggccgggatgacct 21317224
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full insert sequence Length = 1290 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 982 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 923 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 922 cgttgttggcgacgagcgtcttgccggactcgttg 888
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full insert sequence Length = 1266 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 975 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 916 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 915 cgttgttggcgacgagcgtcttgccggactcgttg 881
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full insert sequence Length = 1883 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1559 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1500 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 1499 cgttgttggcgacgagcgtcttgccggactcgttg 1465
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full insert sequence Length = 1475 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1163 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 1104 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 1103 cgttgttggcgacgagcgtcttgccggactcgttg 1069
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full insert sequence Length = 1293 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 981 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 922 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 921 cgttgttggcgacgagcgtcttgccggactcgttg 887
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 117 bits (59), Expect = 3e-23 Identities = 86/95 (90%) Strand = Plus / Minus Query: 273 ttcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatga 332 |||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 21353021 ttcagctgtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatga 21352962 Query: 333 ccttgtcggccaccagcgtcttgccggactcgttg 367 | |||| ||| || ||||||||||||||||||||| Sbjct: 21352961 cgttgttggcgacgagcgtcttgccggactcgttg 21352927 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Plus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 21340318 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 21340377 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 21340378 gctggcgacgagctgcttgccggactcgttggtgatgc 21340415 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 21322567 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 21322626 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 21322627 tgttggcgacgagcgtcttgccgga 21322651 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 21328469 ccagttggccgggatgacct 21328488
>gb|BT017478.1| Zea mays clone EL01N0408G02.c mRNA sequence Length = 832 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 303 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 244 Query: 336 tgtcggccaccagcgtcttgccggactcgttg 367 ||| ||| || ||||||||||||||||||||| Sbjct: 243 tgttggcgacgagcgtcttgccggactcgttg 212
>gb|AF332181.1|AF332181 Zea mays beta-expansin 8 (expB8) mRNA, complete cds Length = 1479 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 939 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 880 Query: 336 tgtcggccaccagcgtcttgccggactcgttg 367 ||| ||| || ||||||||||||||||||||| Sbjct: 879 tgttggcgacgagcgtcttgccggactcgttg 848
>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds Length = 1013 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 274 tcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgac 333 ||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||||||| Sbjct: 859 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 800 Query: 334 cttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||| |||||||||| |||||||||| ||| ||||||||| Sbjct: 799 attgttggccaccagcttcttgccggagtcgctggtgatgc 759
>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds Length = 1056 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 274 tcagctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgac 333 ||||||| ||||||||| |||||||||| |||| ||||| |||||||||||||||||| Sbjct: 891 tcagctgaactggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgac 832 Query: 334 cttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||| |||||||||| |||||||||| ||| ||||||||| Sbjct: 831 attgttggccaccagcttcttgccggagtcgctggtgatgc 791
>gb|BT019137.1| Zea mays clone Contig781.F mRNA sequence Length = 1044 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||| | Sbjct: 564 agctgtactggacgaaggagcggtagaaggtgttggggcgccagttggccgggatgacgt 505 Query: 336 tgtcggccaccagcgtcttgccggactcgttg 367 ||| ||| || ||||||||| ||||||||||| Sbjct: 504 tgttggcgacgagcgtcttggcggactcgttg 473
>gb|AF332175.1|AF332175 Zea mays beta-expansin 2 (expB2) mRNA, partial cds Length = 907 Score = 103 bits (52), Expect = 4e-19 Identities = 82/92 (89%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| | Sbjct: 526 agctgtactggacgaaggagcggtagaaggtgttgggcctccagttggccgggatgacgt 467 Query: 336 tgtcggccaccagcgtcttgccggactcgttg 367 | ||| || ||||||||||||||||||||| Sbjct: 466 tcctggcgacgagcgtcttgccggactcgttg 435
>gb|AF332180.1|AF332180 Zea mays beta-expansin 7 (expB7) mRNA, complete cds Length = 1173 Score = 99.6 bits (50), Expect = 6e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 281 tactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcg 340 ||||||||||| || |||||| ||||| ||||| |||||||||| |||||||| | ||| Sbjct: 867 tactggacgatagaacggtagtaggtgttgggcacccagttggcggggatgacatggtca 808 Query: 341 gccaccagcgtcttgccggactcgtt 366 |||||||||||||||||||||||||| Sbjct: 807 gccaccagcgtcttgccggactcgtt 782
>gb|AF332178.1|AF332178 Zea mays beta-expansin 5 (expB5) mRNA, partial cds Length = 650 Score = 87.7 bits (44), Expect = 2e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 |||||| | ||||||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 529 gtactgaatgatggagcggtagtaggtgttgggcgcccagttggcagggatgacccgagt 470 Query: 340 ggccaccagcgtcttgccggactcgttggtga 371 |||||||||| || |||||||||||||||||| Sbjct: 469 ggccaccagcttcctgccggactcgttggtga 438
>gb|AF332176.1|AF332176 Zea mays beta-expansin 3 (expB3) mRNA, partial cds Length = 788 Score = 83.8 bits (42), Expect = 4e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| | || |||| ||||| ||||| ||||||| ||| | Sbjct: 644 actggacgatggagctgtagacgttgtcgggctgccagtctgccggaatgacctggtccg 585 Query: 342 ccaccagcgtcttgccggactcgttggtga 371 |||||||||||||||||||||||||||||| Sbjct: 584 ccaccagcgtcttgccggactcgttggtga 555
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgc 169330 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 157726 tgccaccaacgtcttgccgga 157746
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 6489 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 6430 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 6429 cgatgagggtcttgccggactcgttggtgatgc 6397
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 103422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 103363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 103362 cgatgagggtcttgccggactcgttggtgatgc 103330 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 91666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 91725 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 91726 tgccaccaacgtcttgccgga 91746
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgc 169330 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 157666 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 157725 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 157726 tgccaccaacgtcttgccgga 157746
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 93244 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 93303 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 93304 cgatgagggtcttgccggactcgttggtgatgc 93336 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 105000 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 104941 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 104940 tgccaccaacgtcttgccgga 104920
>dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G02, full insert sequence Length = 1027 Score = 81.8 bits (41), Expect = 1e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||||| |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 834 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 775 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 774 cgatgagggtcttgccggactcgttggtgatgc 742
>gb|AF261275.1| Oryza sativa beta-expansin (EXPB7) mRNA, complete cds Length = 1210 Score = 77.8 bits (39), Expect = 2e-11 Identities = 79/93 (84%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||||||||| ||| | |||| ||||| ||||| ||| |||||||||| |||| Sbjct: 1026 actggacgatggagctgtaracggtgttgggctgccagtcggcggggatgacctgatcgg 967 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | | || ||||||||||||||||||||||||| Sbjct: 966 cgatgagggtcttgccggactcgttggtgatgc 934
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3 (OSJNBb0014I11.1), mRNA Length = 904 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 898 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 839 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 838 gctggcgacgagctgcttgccggactcgttggtgatgc 801
>gb|AF261271.1| Oryza sativa beta-expansin (EXPB3) mRNA, complete cds Length = 1319 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 897 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 838 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 837 gctggcgacgagctgcttgccggactcgttggtgatgc 800
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 5305 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 5246 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 5245 gctggcgacgagctgcttgccggactcgttggtgatgc 5208 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 23056 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 22997 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 22996 tgttggcgacgagcgtcttgccgga 22972 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 17154 ccagttggccgggatgacct 17135
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full insert sequence Length = 1031 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 653 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 594 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 593 gctggcgacgagctgcttgccggactcgttggtgatgc 556
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full insert sequence Length = 1313 Score = 75.8 bits (38), Expect = 9e-11 Identities = 83/98 (84%) Strand = Plus / Minus Query: 277 gctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacctt 336 |||||||||||||| || ||||||| || |||| |||||||||||||||||||||| Sbjct: 909 gctgtactggacgaaagaacggtagacggccatgggggcccagttggccgggatgacctg 850 Query: 337 gtcggccaccagcgtcttgccggactcgttggtgatgc 374 | ||| || ||| ||||||||||||||||||||||| Sbjct: 849 gctggcgacgagctgcttgccggactcgttggtgatgc 812
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6 (OSJNBb0014I11.3), mRNA Length = 1240 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 922 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 863 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 862 tgttggcgacgagcgtcttgccgga 838
>gb|AF261274.1| Oryza sativa beta-expansin (EXPB6) mRNA, complete cds Length = 1250 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 915 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 856 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 855 tgttggcgacgagcgtcttgccgga 831
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full insert sequence Length = 1257 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full insert sequence Length = 1257 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full insert sequence Length = 1263 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 941 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 882 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 881 tgttggcgacgagcgtcttgccgga 857
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full insert sequence Length = 1259 Score = 73.8 bits (37), Expect = 4e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 276 agctgtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgacct 335 ||||| |||||||||||||||||||| || | |||| | |||||| ||||||||||| | Sbjct: 935 agctgaactggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgt 876 Query: 336 tgtcggccaccagcgtcttgccgga 360 ||| ||| || |||||||||||||| Sbjct: 875 tgttggcgacgagcgtcttgccgga 851
>emb|AJ295941.1|FPR295941 Festuca pratensis mRNA for beta expansin B2 (expB2 gene) Length = 1194 Score = 65.9 bits (33), Expect = 9e-08 Identities = 78/93 (83%) Strand = Plus / Minus Query: 282 actggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtcgg 341 ||||||||| |||||||||| |||| ||||| ||||||||||||||||| |||| || Sbjct: 884 actggacgaaggagcggtagtcggtgttgggcctccagttggccgggatgatgttgttgg 825 Query: 342 ccaccagcgtcttgccggactcgttggtgatgc 374 | || ||| ||||||||| ||| ||||||||| Sbjct: 824 cgacgagctgcttgccggagtcgctggtgatgc 792
>gb|DQ428284.1| Sorghum propinquum locus PRC0324 genomic sequence Length = 477 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428283.1| Sorghum bicolor voucher PI585454 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428282.1| Sorghum bicolor voucher PI267539 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428281.1| Sorghum bicolor voucher PI267408 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428280.1| Sorghum bicolor voucher PI221607 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428279.1| Sorghum bicolor voucher PI152702 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428278.1| Sorghum bicolor voucher NSL92371 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428277.1| Sorghum bicolor voucher NSL87902 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428276.1| Sorghum bicolor voucher NSL87666 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428275.1| Sorghum bicolor voucher NSL77217 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428274.1| Sorghum bicolor voucher NSL77034 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428273.1| Sorghum bicolor voucher NSL56174 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428272.1| Sorghum bicolor voucher NSL56003 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428271.1| Sorghum bicolor voucher NSL55243 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428270.1| Sorghum bicolor voucher NSL51365 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428269.1| Sorghum bicolor voucher NSL51030 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428268.1| Sorghum bicolor voucher NSL50875 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|DQ428267.1| Sorghum bicolor voucher BTx623 locus PRC0324 genomic sequence Length = 467 Score = 65.9 bits (33), Expect = 9e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 274 ccagttggccgggatgacgttgctggccaccagcgtcttgccgga 230
>gb|AF332179.1|AF332179 Zea mays beta-expansin 6 (expB6) mRNA, complete cds Length = 1142 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 318 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||||||||||||| || | |||||||||| | ||||||||||||||||||||| Sbjct: 873 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgc 817
>gb|AY104151.1| Zea mays PCO112411 mRNA sequence Length = 1171 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Minus Query: 318 agttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||||||||||||| || | |||||||||| | ||||||||||||||||||||| Sbjct: 882 agttggccgggatgacgttcttggccaccagctgcctgccggactcgttggtgatgc 826
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full insert sequence Length = 1794 Score = 63.9 bits (32), Expect = 3e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttg 367 ||||| |||||||||||| |||| ||| || ||||||||||||||||||||| Sbjct: 938 ccagtaggccgggatgacgttgttggcgacgagcgtcttgccggactcgttg 887
>gb|AY692478.1| Triticum aestivum beta-expansin EXPB6 mRNA, partial cds Length = 671 Score = 60.0 bits (30), Expect = 5e-06 Identities = 52/60 (86%) Strand = Plus / Minus Query: 315 cccagttggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||| ||| |||||||||| ||||| | ||||||||||||||||||||||| |||| Sbjct: 327 cccagtcggcggggatgacctgttcggcggcgagcgtcttgccggactcgttggtkatgc 268
>emb|AJ890019.1| Triticum aestivum mRNA for expansin EXPB11 protein precursor (expb11 gene), cultivar Wyuna, from endosperm tissue Length = 1032 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 326 gggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 |||||||||| ||||| || || ||||||||||||||||||||||||| Sbjct: 773 gggatgacctgttcggcgacaagtgtcttgccggactcgttggtgatgc 725
>gb|AY589581.1| Triticum aestivum beta-expansin TaEXPB4 mRNA, complete cds Length = 898 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 316 ccagttggccgggatgaccttgtcggccaccagcgtcttgccgga 360 |||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 810 ccagttggccgggatgacttgtttggccaccagcgtcttgccgga 766
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full insert sequence Length = 1019 Score = 58.0 bits (29), Expect = 2e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| |||||||||||| |||||| ||||||| |||||||| | | Sbjct: 889 gtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcggg 830 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 829 tgccaccaacgtcttgccgga 809
>gb|AY589578.1| Triticum aestivum beta-expansin TaEXPB1 mRNA, complete cds Length = 1034 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtga 371 |||||||||||||| |||||| || |||| | |||||||||||| ||||| Sbjct: 904 ggccgggatgacctggtcggcgacgagcgacctgccggactcgtcggtga 855
>gb|AY543542.1| Triticum aestivum expansin EXPB8 mRNA, complete cds Length = 1078 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgat 372 ||||||||||| |||| |||||| |||||||| ||||| ||| ||||||| Sbjct: 794 gccgggatgacattgttggccacaagcgtcttcccggagtcgctggtgat 745
>gb|AF261276.2| Oryza sativa beta-expansin (EXPB8) mRNA, partial cds Length = 933 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Minus Query: 280 gtactggacgatggagcggtagaaggtgctgggcgcccagttggccgggatgaccttgtc 339 ||||||||||| ||| ||||| |||||| |||||| ||||||| |||||||| | | Sbjct: 807 gtactggacgaaggaacggtaaaaggtgttgggcgtccagttgagggggatgacgtcggg 748 Query: 340 ggccaccagcgtcttgccgga 360 ||||||| |||||||||||| Sbjct: 747 tgccaccaacgtcttgccgga 727
>gb|AY589582.1| Triticum aestivum beta-expansin TaEXPB5 mRNA, complete cds Length = 939 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/52 (86%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 ||||||||| | |||| ||||||||||||||| |||| ||| ||||||||| Sbjct: 811 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgc 760
>gb|AY543544.1| Triticum aestivum expansin EXPB10 mRNA, complete cds Length = 1132 Score = 48.1 bits (24), Expect = 0.020 Identities = 45/52 (86%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 ||||||||| | |||| ||||||||||||||| |||| ||| ||||||||| Sbjct: 786 gccgggatggcattgttggccaccagcgtctttccggtatcgctggtgatgc 735
>dbj|AB041625.1| Brassica rapa BcSL10 gene for SLG-like 10, partial cds Length = 3511 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 catatgattccaaatgatgatg 261 |||||||||||||||||||||| Sbjct: 108 catatgattccaaatgatgatg 129
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 1260020 cggccaccagcgtcttgccgg 1260040
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 253 atgatgatgagttcagcagcttcag 277 ||||||||||||| ||||||||||| Sbjct: 345505 atgatgatgagttaagcagcttcag 345481
>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13 Length = 349306 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 226686 cggccaccagcgtcttgccgg 226706
>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14 Length = 327650 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 cggccaccagcgtcttgccgg 359 ||||||||||||||||||||| Sbjct: 274844 cggccaccagcgtcttgccgg 274864
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence Length = 194374 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 tgattccaaatgatgatgagt 264 ||||||||||||||||||||| Sbjct: 177950 tgattccaaatgatgatgagt 177930
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggccaccagcgtcttgccgg 359 |||||||||||||||||||| Sbjct: 2016483 ggccaccagcgtcttgccgg 2016464
>ref|NM_197699.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB2 (OSJNBb0014I11.2), mRNA Length = 1262 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 813 ccagttggccgggatgacct 794
>gb|AY172516.1| Rhizobium etli transcription repair coupling factor (mfd) gene, partial cds; recombination and repair protein (recG) gene, complete cds; and unknown gene Length = 6176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gccaccagcgtcttgccgga 360 |||||||||||||||||||| Sbjct: 4669 gccaccagcgtcttgccgga 4650
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gccaccagcgtcttgccgga 360 |||||||||||||||||||| Sbjct: 2190610 gccaccagcgtcttgccgga 2190629
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 302 aaggtgctgggcgcccagttggcc 325 |||||||||| ||||||||||||| Sbjct: 2061004 aaggtgctggtcgcccagttggcc 2060981
>gb|AC157813.6| Mus musculus chromosome 1, clone RP24-70I14, complete sequence Length = 177317 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 gcacacacaaacagtaataa 22 |||||||||||||||||||| Sbjct: 120092 gcacacacaaacagtaataa 120073
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gtcggccaccagcgtcttgc 356 |||||||||||||||||||| Sbjct: 4141074 gtcggccaccagcgtcttgc 4141055
>gb|U95968.1|OSU95968 Oryza sativa beta-expansin (EXPB2) mRNA, complete cds Length = 999 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 813 ccagttggccgggatgacct 794
>dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-F04, full insert sequence Length = 1043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 812 ccagttggccgggatgacct 793
>emb|BX649380.7| Zebrafish DNA sequence from clone CH211-87P6 in linkage group 4, complete sequence Length = 172167 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 240 catatgattccaaatgatgatgagttca 267 |||||||||| ||||| ||||||||||| Sbjct: 166340 catatgattctaaatggtgatgagttca 166367
>dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C01, full insert sequence Length = 1259 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 810 ccagttggccgggatgacct 791
>dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-F11, full insert sequence Length = 1026 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 ccagttggccgggatgacct 335 |||||||||||||||||||| Sbjct: 803 ccagttggccgggatgacct 784
>gb|AC107766.14| Mus musculus chromosome 1, clone RP23-166L24, complete sequence Length = 182865 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 gcacacacaaacagtaataa 22 |||||||||||||||||||| Sbjct: 7061 gcacacacaaacagtaataa 7080
>gb|AF107020.1|AF107020 Actinomyces naeslundii strain LY7 type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF107019.1|AF107019 Actinomyces naeslundii strain P-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|AF106035.1|AF106035 Actinomyces naeslundii strain B-1-K type-1 fimbrial major subunit precursor (fimP) gene, complete cds Length = 1622 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 485 ggccgggatgaccttgtcgg 466
>gb|U91981.1|TAU91981 Triticum aestivum pollen allergen homolog mRNA, complete cds Length = 1232 Score = 40.1 bits (20), Expect = 5.0 Identities = 44/52 (84%) Strand = Plus / Minus Query: 323 gccgggatgaccttgtcggccaccagcgtcttgccggactcgttggtgatgc 374 ||||||||| | |||| ||| ||||||||||| |||| ||| ||||||||| Sbjct: 816 gccgggatggcattgttggcgaccagcgtctttccggtatcgctggtgatgc 765
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 gctgggcgcccagttggccgggat 330 ||||||||||||||| |||||||| Sbjct: 594398 gctgggcgcccagtttgccgggat 594375
>gb|M32067.1|ACYFIMBA A.viscosus fimbrial structural protein type 1 subunit gene, complete cds Length = 1850 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 ggccgggatgaccttgtcgg 341 |||||||||||||||||||| Sbjct: 588 ggccgggatgaccttgtcgg 569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,150,566 Number of Sequences: 3902068 Number of extensions: 3150566 Number of successful extensions: 59075 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58591 Number of HSP's gapped (non-prelim): 458 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)