Clone Name | rbart58g06 |
---|---|
Clone Library Name | barley_pub |
>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor| Length = 2809 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 145 YSPEPRQRTCM*SHQCSVVV*YCSLLCKSSK 53 Y+P+ TC+ +CS V C+ LCK++K Sbjct: 2394 YTPDATATTCLDMDECSQVPKPCTFLCKNTK 2424
>PAK1_YEAST (P38990) Serine/threonine-protein kinase PAK1 (EC 2.7.11.1)| Length = 1142 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +2 Query: 146 QSKSKSSTSNLEDKLEFHGNTDDGK 220 Q K+ + TSNL D +EF+GN D K Sbjct: 1022 QKKATTETSNLTDIVEFNGNNDHRK 1046
>UN13C_HUMAN (Q8NB66) Unc-13 homolog C (Munc13-3) (Fragment)| Length = 1190 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/41 (29%), Positives = 19/41 (46%) Frame = +3 Query: 129 LGSGEYRARARVAHQTWKTNWNSTVTRTMGREGRPHQKEIH 251 LG + + + TW +N T +G+E RP E+H Sbjct: 1070 LGDKKRKQGTKTKSNTWSPKYNETFQFILGKENRPGAYELH 1110
>UN13C_RAT (Q62770) Unc-13 homolog C (Munc13-3)| Length = 2204 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/41 (29%), Positives = 18/41 (43%) Frame = +3 Query: 129 LGSGEYRARARVAHQTWKTNWNSTVTRTMGREGRPHQKEIH 251 LG + + + TW +N T +G E RP E+H Sbjct: 2084 LGDKKRKQGTKTKSNTWSPKYNETFQFILGNENRPGAYELH 2124
>EGFL8_HUMAN (Q99944) EGF-like domain-containing protein 8 precursor (Epidermal| growth factor-like protein 8) (Multiple EGF-like domain protein 8) (Vascular endothelial-statin 2) (VE-statin-2) Length = 293 Score = 28.9 bits (63), Expect = 3.4 Identities = 25/79 (31%), Positives = 34/79 (43%) Frame = +3 Query: 45 ETTLLDLHNNEQYYTTTEH**DYIQVLCLGSGEYRARARVAHQTWKTNWNSTVTRTMGRE 224 +T ++ LH NE Y Y L L +G R T++T + R M RE Sbjct: 41 QTLVVPLHYNESYSQPV-----YKPYLTLCAG------RRICSTYRTMY-----RVMWRE 84 Query: 225 GRPHQKEIHSEHAVCSSGW 281 R +E+ HAVC GW Sbjct: 85 VR---REVQQTHAVCCQGW 100
>VE2_PAPVE (P11329) Probable regulatory protein E2| Length = 415 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +3 Query: 165 AHQTWKTNWNSTVTRTMGREGRPHQKEIHSEHAVCSSGWDGIFLCS 302 +++TW T W++ R EG E AVC++ GI+ C+ Sbjct: 128 SNKTWYTAWSTVYVRGTEEEG--------WETAVCAADGQGIYYCA 165
>NUCC_PSINU (Q8WHX3) NAD(P)H-quinone oxidoreductase chain H, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain H) (NADH-plastoquinone oxidoreductase 49 kDa subunit) Length = 393 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 156 ARVAHQTWKTNWNSTVTRTMGREGRPHQKEIHSEHAV---CSSGWDGIFL 296 AR HQ+ WN + MG++ P K + EH V G GIFL Sbjct: 292 ARRLHQSQNLEWNDFDYQFMGKKSSPTFKLLKQEHYVRIEAPKGELGIFL 341
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 28.1 bits (61), Expect = 5.9 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Frame = -3 Query: 300 YKERCHPNPKSKLRVLSEFLSDGGGP----LFPSSVLPWNSNLSSKFDVXXXXXLCIHLN 133 + +R P+P +++RVL F S GG P +F + + W S+ D L Sbjct: 2176 FVQRLTPHPDARIRVLPAF-SAGGPPTRGLMFGTRLADWRRGKLSETDPLAPWRSVPELG 2234 Query: 132 PDRGLVCNLIS-AQLLCSTA 76 +RG +S AQ L + + Sbjct: 2235 TERGAALGKLSPAQALAAVS 2254
>CRIM1_HUMAN (Q9NZV1) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| (Cysteine-rich repeat-containing protein S52) Length = 1036 Score = 27.7 bits (60), Expect = 7.7 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -3 Query: 114 CNLISAQLLCSTARCCANP 58 CN+I+ + C+T R C+NP Sbjct: 133 CNIINGKCECNTIRTCSNP 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,267,481 Number of Sequences: 219361 Number of extensions: 844608 Number of successful extensions: 2284 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2237 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2282 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)