ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 234 1e-58
2dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 234 1e-58
3dbj|AK071175.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 1e-58
4dbj|AK060274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 1e-58
5gb|AY110443.1| Zea mays CL17797_1 mRNA sequence 125 8e-26
6ref|XM_516363.1| PREDICTED: Pan troglodytes golgi autoantigen, g... 48 0.016
7gb|AC097359.2| Homo sapiens chromosome 3 clone RP11-259K5, compl... 48 0.016
8gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, comp... 48 0.016
9ref|NM_002078.3| Homo sapiens golgi autoantigen, golgin subfamil... 48 0.016
10dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 48 0.016
11gb|U31906.1|HSU31906 Homo sapiens golgin-245 mRNA, complete cds 48 0.016
12gb|U41740.1|HSU41740 Human trans-Golgi p230 mRNA, complete cds 48 0.016
13dbj|AB209693.1| Homo sapiens mRNA for golgi autoantigen, golgin ... 48 0.016
14emb|X82834.1|HSGOLGIN H.sapiens mRNA for golgin 48 0.016
15dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 48 0.016
16ref|XM_846110.1| PREDICTED: Canis familiaris similar to Golgi au... 46 0.063
17gb|DQ214606.1| Taeniopygia guttata clone 0058P0014F07 UDP-Glc/Ga... 44 0.25
18gb|DQ214605.1| Taeniopygia guttata clone 0058P0062H10 UDP-Glc/Ga... 44 0.25
19gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome ... 44 0.25
20gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete... 44 0.25
21gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, comple... 44 0.25
22gb|DQ214604.1| Taeniopygia guttata clone 0058P0013E09 UDP-Glc/Ga... 42 0.98
23gb|BT015974.1| Drosophila melanogaster RE74713 full insert cDNA 42 0.98
24gb|CP000081.1| Leishmania major chromosome 35, complete sequence 42 0.98
25gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromo... 42 0.98
26emb|CT030267.1| Xenopus tropicalis finished cDNA, clone TEgg119f15 42 0.98
27emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 i... 42 0.98
28emb|AL669849.19| Mouse DNA sequence from clone RP23-341O22 on ch... 42 0.98
29ref|NM_166164.2| Drosophila melanogaster Vacuolar H+ ATPase 44kD... 42 0.98
30ref|NM_166163.1| Drosophila melanogaster Vacuolar H+ ATPase 44kD... 42 0.98
31gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, comp... 42 0.98
32gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, r... 42 0.98
33gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, r... 42 0.98
34gb|AC135112.5| Mus musculus BAC clone RP23-477F17 from chromosom... 42 0.98
35gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Canc... 42 0.98
36emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on ch... 42 0.98
37emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chr... 42 0.98
38gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43... 42 0.98
39gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome ... 40 3.9
40gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 40 3.9
41gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cance... 40 3.9
42gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosom... 40 3.9
43gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, comp... 40 3.9
44emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 3.9
45gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosom... 40 3.9
46gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, compl... 40 3.9
47gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, comple... 40 3.9
48gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's ... 40 3.9
49gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP... 40 3.9
50gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosom... 40 3.9
51gb|DQ057526.1| Antonospora locustae clone 2a09 mRNA sequence 40 3.9
52gb|DQ057515.1| Antonospora locustae clone 1k16 mRNA sequence 40 3.9
53gb|DQ057501.1| Antonospora locustae clone 1f20 mRNA sequence 40 3.9
54gb|AC159506.8| Mus musculus 6 BAC RP23-337N18 (Roswell Park Canc... 40 3.9
55gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, comple... 40 3.9
56gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9
57tpg|BK000933.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M329,... 40 3.9
58emb|AL731773.20| Mouse DNA sequence from clone RP23-152G20 on ch... 40 3.9
59gb|AC093607.3| Homo sapiens BAC clone RP11-654J13 from 4, comple... 40 3.9
60emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in... 40 3.9
61gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Can... 40 3.9
62dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.9
63gb|AC103595.2| Homo sapiens chromosome 1 clone RP11-415P10, comp... 40 3.9
64emb|BX004764.8| Zebrafish DNA sequence from clone DKEY-162L4 in ... 40 3.9
65emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on ch... 40 3.9
66emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 ... 40 3.9
67gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, co... 40 3.9
68gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complet... 40 3.9
69emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 ... 40 3.9
70gb|AC153991.3| Mus musculus 6 BAC RP24-541D10 (Roswell Park Canc... 40 3.9
71gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.9
72gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complet... 40 3.9
73emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 ... 40 3.9
74gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, comple... 40 3.9
75gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosom... 40 3.9
76emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chr... 40 3.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  234 bits (118), Expect = 1e-58
 Identities = 160/174 (91%)
 Strand = Plus / Minus

                                                                            
Query: 122      tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 181
                |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 22923071 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 22923012

                                                                            
Query: 182      gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 241
                 |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 22923011 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 22922952

                                                                      
Query: 242      aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgtt 295
                 || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 22922951 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgtt 22922898
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>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0502H06
          Length = 165630

 Score =  234 bits (118), Expect = 1e-58
 Identities = 160/174 (91%)
 Strand = Plus / Minus

                                                                         
Query: 122   tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 181
             |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 97893 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 97834

                                                                         
Query: 182   gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 241
              |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 97833 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 97774

                                                                   
Query: 242   aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgtt 295
              || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 97773 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgtt 97720
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>dbj|AK071175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084M11, full
            insert sequence
          Length = 1427

 Score =  234 bits (118), Expect = 1e-58
 Identities = 160/174 (91%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 181
            |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 1131 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 1072

                                                                        
Query: 182  gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 241
             |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 1071 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 1012

                                                                  
Query: 242  aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgtt 295
             || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgtt 958
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>dbj|AK060274.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-G07, full
            insert sequence
          Length = 1433

 Score =  234 bits (118), Expect = 1e-58
 Identities = 160/174 (91%)
 Strand = Plus / Minus

                                                                        
Query: 122  tcattccttgtgatctctgcccttctttctcttccatttgagatatatttggagagagag 181
            |||||||||||| |||||| ||||||||||||||||||||||| | ||||| | ||||||
Sbjct: 1130 tcattccttgtggtctctgaccttctttctcttccatttgagaaagatttgtaaagagag 1071

                                                                        
Query: 182  gccagaaaagaccatcacaacacttccccattgctccatggacagtgggttaccactgat 241
             |||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||
Sbjct: 1070 accagaaaagaccatcacaacacttccccattgcttcaaggagagtgggttaccactgat 1011

                                                                  
Query: 242  aactgatgagatgacgatgctcatgaacttgcgggtggtggtgatggtagtgtt 295
             || || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 gacggaggagatgacaatgctcatgaacttgcgggtggtggtgatggtagtgtt 957
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>gb|AY110443.1| Zea mays CL17797_1 mRNA sequence
          Length = 800

 Score =  125 bits (63), Expect = 8e-26
 Identities = 135/159 (84%)
 Strand = Plus / Plus

                                                                       
Query: 137 tctgcccttctttctcttccatttgagatatatttggagagagaggccagaaaagaccat 196
           |||| ||||||||||||||||||||||||||||||||| |||||||||  | ||||||||
Sbjct: 232 tctggccttctttctcttccatttgagatatatttggatagagaggcctaagaagaccat 291

                                                                       
Query: 197 cacaacacttccccattgctccatggacagtgggttaccactgataactgatgagatgac 256
           ||||||||| |||||||||| ||  || | ||| || |||||||| || ||||| |  ||
Sbjct: 292 cacaacactaccccattgcttcaaagataatggattgccactgatgacggatgaaaccac 351

                                                  
Query: 257 gatgctcatgaacttgcgggtggtggtgatggtagtgtt 295
            ||||||||||| || |||||||| ||||| || |||||
Sbjct: 352 aatgctcatgaatttacgggtggtagtgatcgttgtgtt 390
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>ref|XM_516363.1| PREDICTED: Pan troglodytes golgi autoantigen, golgin subfamily a, 4
            (LOC460264), mRNA
          Length = 7074

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 5254 cttctttctcttccatttgagata 5231
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>gb|AC097359.2| Homo sapiens chromosome 3 clone RP11-259K5, complete sequence
          Length = 187127

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 143    cttctttctcttccatttgagata 166
              ||||||||||||||||||||||||
Sbjct: 145909 cttctttctcttccatttgagata 145886
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>gb|AC136290.2| Homo sapiens chromosome 3 clone CTD-2104B13, complete sequence
          Length = 136961

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 143    cttctttctcttccatttgagata 166
              ||||||||||||||||||||||||
Sbjct: 103283 cttctttctcttccatttgagata 103306
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>ref|NM_002078.3| Homo sapiens golgi autoantigen, golgin subfamily a, 4 (GOLGA4), mRNA
          Length = 7717

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 5294 cttctttctcttccatttgagata 5271
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>dbj|AP006190.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-145L6, complete
              sequence
          Length = 176082

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 143    cttctttctcttccatttgagata 166
              ||||||||||||||||||||||||
Sbjct: 115333 cttctttctcttccatttgagata 115310
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>gb|U31906.1|HSU31906 Homo sapiens golgin-245 mRNA, complete cds
          Length = 6965

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 4604 cttctttctcttccatttgagata 4581
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>gb|U41740.1|HSU41740 Human trans-Golgi p230 mRNA, complete cds
          Length = 7695

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 5275 cttctttctcttccatttgagata 5252
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>dbj|AB209693.1| Homo sapiens mRNA for golgi autoantigen, golgin subfamily a, 4
            variant protein
          Length = 7649

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 5331 cttctttctcttccatttgagata 5308
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>emb|X82834.1|HSGOLGIN H.sapiens mRNA for golgin
          Length = 7683

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 5197 cttctttctcttccatttgagata 5174
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>dbj|AP000493.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:301 to 308,
            anti-oncogene region, section 1/5
          Length = 200000

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 143  cttctttctcttccatttgagata 166
            ||||||||||||||||||||||||
Sbjct: 1710 cttctttctcttccatttgagata 1687
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>ref|XM_846110.1| PREDICTED: Canis familiaris similar to Golgi autoantigen, golgin
            subfamily A member 4 (Trans-Golgi p230) (256 kDa golgin)
            (Golgin-245) (72.1 protein) (LOC477020), mRNA
          Length = 4559

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 144  ttctttctcttccatttgagata 166
            |||||||||||||||||||||||
Sbjct: 2760 ttctttctcttccatttgagata 2738
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>gb|DQ214606.1| Taeniopygia guttata clone 0058P0014F07 UDP-Glc/Gal endoplasmic
           reticulum nucleotide sugar transporter-like mRNA,
           complete sequence
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gaacttgcgggtggtggtgatg 287
           ||||||||||||||||||||||
Sbjct: 898 gaacttgcgggtggtggtgatg 877
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>gb|DQ214605.1| Taeniopygia guttata clone 0058P0062H10 UDP-Glc/Gal endoplasmic
           reticulum nucleotide sugar transporter-like mRNA,
           complete sequence
          Length = 1345

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 266 gaacttgcgggtggtggtgatg 287
           ||||||||||||||||||||||
Sbjct: 887 gaacttgcgggtggtggtgatg 866
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>gb|AC161757.5| Mus musculus BAC clone RP24-87P2 from chromosome 5, complete sequence
          Length = 193583

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 274   gggtggtggtgatggtagtgtt 295
             ||||||||||||||||||||||
Sbjct: 20255 gggtggtggtgatggtagtgtt 20234
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>gb|AC068056.7| Homo sapiens BAC clone RP11-84M3 from 2, complete sequence
          Length = 193017

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 138    ctgcccttctttctcttccatt 159
              ||||||||||||||||||||||
Sbjct: 116516 ctgcccttctttctcttccatt 116537
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>gb|AC124428.4| Mus musculus BAC clone RP24-239M23 from 5, complete sequence
          Length = 167334

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 274   gggtggtggtgatggtagtgtt 295
             ||||||||||||||||||||||
Sbjct: 79522 gggtggtggtgatggtagtgtt 79501
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>gb|DQ214604.1| Taeniopygia guttata clone 0058P0013E09 UDP-Glc/Gal endoplasmic
           reticulum nucleotide sugar transporter-like mRNA,
           complete sequence
          Length = 1330

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 267 aacttgcgggtggtggtgatg 287
           |||||||||||||||||||||
Sbjct: 872 aacttgcgggtggtggtgatg 852
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>gb|BT015974.1| Drosophila melanogaster RE74713 full insert cDNA
          Length = 3887

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ggtggtggtgatggtagtgtt 295
           |||||||||||||||||||||
Sbjct: 628 ggtggtggtgatggtagtgtt 608
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 498973 ggtggtggtgatggtagtgtt 498993
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>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete
              sequence
          Length = 206418

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 134399 ggtggtggtgatggtagtgtt 134379
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>emb|CT030267.1| Xenopus tropicalis finished cDNA, clone TEgg119f15
          Length = 1420

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 128 cttgtgatctctgcccttctt 148
           |||||||||||||||||||||
Sbjct: 730 cttgtgatctctgcccttctt 710
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>emb|CR356222.24| Zebrafish DNA sequence from clone DKEY-103J14 in linkage group 13,
             complete sequence
          Length = 206656

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    atatctccacaacaaatgtgt 78
             |||||||||||||||||||||
Sbjct: 25531 atatctccacaacaaatgtgt 25551
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>emb|AL669849.19| Mouse DNA sequence from clone RP23-341O22 on chromosome 11 Contains
             part of the Dock2 gene for dedicator of cyto-kinesis 2,
             complete sequence
          Length = 148320

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 136   ctctgcccttctttctcttccattt 160
             |||||||||||| ||||||||||||
Sbjct: 33192 ctctgcccttctgtctcttccattt 33216
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>ref|NM_166164.2| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit
           CG8048-RD, transcript variant D (Vha44), mRNA
          Length = 3055

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ggtggtggtgatggtagtgtt 295
           |||||||||||||||||||||
Sbjct: 628 ggtggtggtgatggtagtgtt 608
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>ref|NM_166163.1| Drosophila melanogaster Vacuolar H+ ATPase 44kD C subunit
           CG8048-RC, transcript variant C (Vha44), mRNA
          Length = 2239

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 275 ggtggtggtgatggtagtgtt 295
           |||||||||||||||||||||
Sbjct: 628 ggtggtggtgatggtagtgtt 608
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>gb|AC091906.3| Homo sapiens chromosome 5 clone RP11-193P20, complete sequence
          Length = 195510

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 187484 ggtggtggtgatggtagtgtt 187464
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>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone
             BACR25I17, complete sequence
          Length = 157835

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   ggtggtggtgatggtagtgtt 295
             |||||||||||||||||||||
Sbjct: 91607 ggtggtggtgatggtagtgtt 91627
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>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone
             BACR17I17, complete sequence
          Length = 159640

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   ggtggtggtgatggtagtgtt 295
             |||||||||||||||||||||
Sbjct: 68157 ggtggtggtgatggtagtgtt 68177
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>gb|AC135112.5| Mus musculus BAC clone RP23-477F17 from chromosome unknown, complete
              sequence
          Length = 178498

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 156397 ggtggtggtgatggtagtgtt 156377
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>gb|AC154008.1| Mus musculus 6 BAC RP24-470H20 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 139613

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 168   atttggagagagaggccagaaaaga 192
             |||||||| ||||||||||||||||
Sbjct: 56395 atttggagggagaggccagaaaaga 56371
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>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete
              sequence
          Length = 184943

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 124985 ggtggtggtgatggtagtgtt 125005
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>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete
             sequence
          Length = 166963

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   ggtggtggtgatggtagtgtt 295
             |||||||||||||||||||||
Sbjct: 30797 ggtggtggtgatggtagtgtt 30817
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>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete
              sequence
          Length = 258223

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    ggtggtggtgatggtagtgtt 295
              |||||||||||||||||||||
Sbjct: 127222 ggtggtggtgatggtagtgtt 127242
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>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence
          Length = 229027

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   gagaggccagaaaagaccat 196
             ||||||||||||||||||||
Sbjct: 28924 gagaggccagaaaagaccat 28943
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>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    tcttccatttgagatatatt 170
              ||||||||||||||||||||
Sbjct: 207857 tcttccatttgagatatatt 207876
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>gb|AC156396.8| Mus musculus 6 BAC RP24-303J2 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 145666

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 179  gaggccagaaaagaccatca 198
            ||||||||||||||||||||
Sbjct: 3209 gaggccagaaaagaccatca 3190
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>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence
          Length = 227388

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    gggtggtggtgatggtagtg 293
              ||||||||||||||||||||
Sbjct: 169797 gggtggtggtgatggtagtg 169816
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>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence
          Length = 153903

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    gggtggtggtgatggtagtg 293
              ||||||||||||||||||||
Sbjct: 144797 gggtggtggtgatggtagtg 144778
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>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    ttgcgggtggtggtgatggt 289
              ||||||||||||||||||||
Sbjct: 190285 ttgcgggtggtggtgatggt 190304
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>gb|AC124588.4| Mus musculus BAC clone RP23-133F15 from chromosome 1, complete sequence
          Length = 141995

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   tttggagagagaggccagaaaaga 192
             ||||||| ||||||||||||||||
Sbjct: 74254 tttggagggagaggccagaaaaga 74231
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>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence
          Length = 184090

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   ggttaccactgataactgatgaga 252
             ||||||| ||||||||||||||||
Sbjct: 70445 ggttacctctgataactgatgaga 70468
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>gb|AC121902.2| Mus musculus BAC clone RP24-168N14 from 8, complete sequence
          Length = 151290

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    ggtggtggtgatggtagtgt 294
              ||||||||||||||||||||
Sbjct: 125610 ggtggtggtgatggtagtgt 125629
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>gb|AC096909.10| Rattus norvegicus 8 BAC CH230-88B13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 241078

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    ggtggtggtgatggtagtgt 294
              ||||||||||||||||||||
Sbjct: 136936 ggtggtggtgatggtagtgt 136955
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>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete
              Sequence, complete sequence
          Length = 192227

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    gagaggccagaaaagaccat 196
              ||||||||||||||||||||
Sbjct: 117103 gagaggccagaaaagaccat 117084
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>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence
          Length = 191467

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   gagaggccagaaaagaccat 196
             ||||||||||||||||||||
Sbjct: 35081 gagaggccagaaaagaccat 35062
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>gb|DQ057526.1| Antonospora locustae clone 2a09 mRNA sequence
          Length = 1922

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 caacacttccccattgctccatgg 222
           ||||| ||||||||||||||||||
Sbjct: 815 caacaattccccattgctccatgg 838
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>gb|DQ057515.1| Antonospora locustae clone 1k16 mRNA sequence
          Length = 808

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 caacacttccccattgctccatgg 222
           ||||| ||||||||||||||||||
Sbjct: 472 caacaattccccattgctccatgg 495
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>gb|DQ057501.1| Antonospora locustae clone 1f20 mRNA sequence
          Length = 1075

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 caacacttccccattgctccatgg 222
           ||||| ||||||||||||||||||
Sbjct: 716 caacaattccccattgctccatgg 739
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>gb|AC159506.8| Mus musculus 6 BAC RP23-337N18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 191797

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    ggtggtggtgatggtagtgt 294
              ||||||||||||||||||||
Sbjct: 108500 ggtggtggtgatggtagtgt 108519
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>gb|AC093323.3| Homo sapiens BAC clone RP11-539L10 from 4, complete sequence
          Length = 195576

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gggtggtggtgatggtagtg 293
             ||||||||||||||||||||
Sbjct: 46575 gggtggtggtgatggtagtg 46556
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>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03,
              complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    cccttctttctcttccattt 160
              ||||||||||||||||||||
Sbjct: 118875 cccttctttctcttccattt 118894
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>tpg|BK000933.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M329, complete sequence
          Length = 14006

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   cccttctttctcttccattt 160
             ||||||||||||||||||||
Sbjct: 13934 cccttctttctcttccattt 13953
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>emb|AL731773.20| Mouse DNA sequence from clone RP23-152G20 on chromosome X, complete
             sequence
          Length = 162215

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   gaggccagaaaagaccatca 198
             ||||||||||||||||||||
Sbjct: 50703 gaggccagaaaagaccatca 50722
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>gb|AC093607.3| Homo sapiens BAC clone RP11-654J13 from 4, complete sequence
          Length = 143993

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   tctctgcccttctttctcttccat 158
             ||||| ||||||||||||||||||
Sbjct: 72647 tctctccccttctttctcttccat 72624
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>emb|BX682556.5| Zebrafish DNA sequence from clone DKEY-105I19 in linkage group 3,
              complete sequence
          Length = 244555

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 93     aaatcaaaatgtacttataagaac 116
              |||||||||||||||||| |||||
Sbjct: 101347 aaatcaaaatgtacttattagaac 101370
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>gb|AC068807.21| Mus musculus 11 BAC RP23-346P7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 208135

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    gggtggtggtgatggtagtg 293
              ||||||||||||||||||||
Sbjct: 188604 gggtggtggtgatggtagtg 188585
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 141     cccttctttctcttccattt 160
               ||||||||||||||||||||
Sbjct: 4173585 cccttctttctcttccattt 4173566
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>gb|AC103595.2| Homo sapiens chromosome 1 clone RP11-415P10, complete sequence
          Length = 122000

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   ttccccattgctccatggacagtg 228
             ||||||||||| ||||||||||||
Sbjct: 99141 ttccccattgccccatggacagtg 99164
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>emb|BX004764.8| Zebrafish DNA sequence from clone DKEY-162L4 in linkage group 3, complete
              sequence
          Length = 238651

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 93     aaatcaaaatgtacttataagaac 116
              |||||||||||||||||| |||||
Sbjct: 195567 aaatcaaaatgtacttatcagaac 195590
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>emb|AL954662.13| Mouse DNA sequence from clone RP23-348L16 on chromosome 2, complete
             sequence
          Length = 132427

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ccatttgagatatatttgga 174
             ||||||||||||||||||||
Sbjct: 30171 ccatttgagatatatttgga 30190
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>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
              sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    aacacttccccattgctcca 219
              ||||||||||||||||||||
Sbjct: 119160 aacacttccccattgctcca 119141
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>gb|AC115020.11| Mus musculus chromosome 1, clone RP24-231D14, complete sequence
          Length = 188569

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    gtggtggtgatggtagtgtt 295
              ||||||||||||||||||||
Sbjct: 125113 gtggtggtgatggtagtgtt 125132
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>gb|AC157824.1| Mus musculus BAC clone RP23-265E4 from 1, complete sequence
          Length = 153577

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 169   tttggagagagaggccagaaaaga 192
             ||||||| ||||||||||||||||
Sbjct: 13532 tttggagggagaggccagaaaaga 13555
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>emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 in linkage group 25,
             complete sequence
          Length = 131786

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     aatgtaaacctcttttctataatt 29
             ||||||||||| ||||||||||||
Sbjct: 37591 aatgtaaacctgttttctataatt 37614
to top
>gb|AC153991.3| Mus musculus 6 BAC RP24-541D10 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 202289

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ggtggtggtgatggtagtgt 294
             ||||||||||||||||||||
Sbjct: 16465 ggtggtggtgatggtagtgt 16484
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 141     cccttctttctcttccattt 160
               ||||||||||||||||||||
Sbjct: 4174406 cccttctttctcttccattt 4174387
to top
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence
          Length = 153492

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gggtggtggtgatggtagtg 293
             ||||||||||||||||||||
Sbjct: 79410 gggtggtggtgatggtagtg 79391
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>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete
             sequence
          Length = 111590

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   gggtggtggtgatggtagtg 293
             ||||||||||||||||||||
Sbjct: 33647 gggtggtggtgatggtagtg 33628
to top
>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence
          Length = 202869

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   gaggccagaaaagaccatca 198
             ||||||||||||||||||||
Sbjct: 20671 gaggccagaaaagaccatca 20690
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>gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosome 9, complete sequence
          Length = 152842

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 275   ggtggtggtgatggtagtgt 294
             ||||||||||||||||||||
Sbjct: 92113 ggtggtggtgatggtagtgt 92094
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>emb|AL591436.8| Mouse DNA sequence from clone RP23-434F13 on chromosome 11, complete
             sequence
          Length = 187006

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   gggtggtggtgatggtagtg 293
             ||||||||||||||||||||
Sbjct: 69174 gggtggtggtgatggtagtg 69193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,771,575
Number of Sequences: 3902068
Number of extensions: 3771575
Number of successful extensions: 119043
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118779
Number of HSP's gapped (non-prelim): 264
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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