>SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta|
           chain 4) (Beta-V spectrin) (BSPECV)
          Length = 3674

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -2

Query: 302 AAGHRRRRPAMTSRPPPS 249
           AAGHR RRP+   R PPS
Sbjct: 14  AAGHRSRRPSTELRVPPS 31

>RPOA_LACSS (Q38UT7) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 312

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 83  HKPIQIVRGRIYVAPIRNKIEQFQPGLLPL 172
           H  + + +GR YVA ++NK +    G+LP+
Sbjct: 135 HVRMTVKKGRGYVAAVQNKSDDMPIGVLPI 164


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,331,033
Number of Sequences: 219361
Number of extensions: 756483
Number of successful extensions: 2225
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2222
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)