Clone Name | rbart58f06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MRAW_CLOAB (Q97H81) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) | 28 | 5.3 | 2 | MRAW_FUSNN (Q8R6F5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) | 28 | 5.3 | 3 | VENV_FOWPV (P36316) Major envelope protein (43 kDa protein) (p43K) | 27 | 9.1 |
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>MRAW_CLOAB (Q97H81) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 312 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = -2 Query: 256 DLKSMCKCPKLNPMCSCIHQLDPVDITH-PMYAGMYEL 146 +L+ C CPK PMC C + IT P+ A YEL Sbjct: 256 ELQDPCMCPKDIPMCVCGKKPKIKIITRKPIEASSYEL 293
>MRAW_FUSNN (Q8R6F5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 314 Score = 28.1 bits (61), Expect = 5.3 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = -2 Query: 256 DLKSMCKCPKLNPMCSC 206 DL + CKCPK P+C C Sbjct: 258 DLATACKCPKDIPICVC 274
>VENV_FOWPV (P36316) Major envelope protein (43 kDa protein) (p43K)| Length = 377 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/36 (30%), Positives = 22/36 (61%) Frame = +3 Query: 195 N*WIQEHIGFSLGHLHMLLRSLTYVYN*GVSSDNSS 302 N W+ + + F +G ++ +LT + N G+ S+N+S Sbjct: 121 NFWVVDKLHFYIGSASLMGNALTTIKNMGIYSENNS 156 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,384,528 Number of Sequences: 219361 Number of extensions: 916558 Number of successful extensions: 1668 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1643 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1668 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)