ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MRAW_CLOAB (Q97H81) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 5.3
2MRAW_FUSNN (Q8R6F5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-) 28 5.3
3VENV_FOWPV (P36316) Major envelope protein (43 kDa protein) (p43K) 27 9.1

>MRAW_CLOAB (Q97H81) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 312

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 256 DLKSMCKCPKLNPMCSCIHQLDPVDITH-PMYAGMYEL 146
           +L+  C CPK  PMC C  +     IT  P+ A  YEL
Sbjct: 256 ELQDPCMCPKDIPMCVCGKKPKIKIITRKPIEASSYEL 293



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>MRAW_FUSNN (Q8R6F5) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 314

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 256 DLKSMCKCPKLNPMCSC 206
           DL + CKCPK  P+C C
Sbjct: 258 DLATACKCPKDIPICVC 274



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>VENV_FOWPV (P36316) Major envelope protein (43 kDa protein) (p43K)|
          Length = 377

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 195 N*WIQEHIGFSLGHLHMLLRSLTYVYN*GVSSDNSS 302
           N W+ + + F +G   ++  +LT + N G+ S+N+S
Sbjct: 121 NFWVVDKLHFYIGSASLMGNALTTIKNMGIYSENNS 156


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,384,528
Number of Sequences: 219361
Number of extensions: 916558
Number of successful extensions: 1668
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1668
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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