ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UGDH_SOYBN (Q96558) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (U... 51 8e-07

>UGDH_SOYBN (Q96558) UDP-glucose 6-dehydrogenase (EC 1.1.1.22) (UDP-Glc|
           dehydrogenase) (UDP-GlcDH) (UDPGDH)
          Length = 480

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 23/25 (92%), Positives = 23/25 (92%)
 Frame = -2

Query: 377 REIGFXVYSIGKPLDGWLKDMPAVA 303
           REIGF VYSIGKPLD WLKDMPAVA
Sbjct: 456 REIGFIVYSIGKPLDPWLKDMPAVA 480


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,738,204
Number of Sequences: 219361
Number of extensions: 856152
Number of successful extensions: 1822
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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