ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genom... 76 9e-11
2gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genom... 76 9e-11
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 9e-11
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 9e-11
5dbj|AK106105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
6dbj|AK060848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 9e-11
7dbj|AK065159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
8gb|BT016933.1| Zea mays clone E04912703G08.c mRNA sequence 66 9e-08
9gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 58 2e-05
10gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genom... 58 2e-05
11gb|AY738712.1| Digitalis thapsi progesterone 5-beta-reductase ge... 46 0.081
12gb|AY738710.1| Digitalis mariana subsp. heywoodii progesterone 5... 46 0.081
13gb|AY585868.1| Digitalis purpurea putative progesterone 5-beta-r... 46 0.081
14emb|AJ310673.1|DPU310673 Digitalis purpurea mRNA for progesteron... 46 0.081
15ref|XM_479054.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.32
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
17dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
18gb|AC182490.3| Pan troglodytes BAC clone CH251-430P12 from chrom... 42 1.3
19gb|AC120782.25| Pan troglodytes clone rp43-45g12, complete sequence 42 1.3
20gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence 42 1.3
21gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, comple... 42 1.3
22ref|XM_473990.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
23gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence 40 5.0
24emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chro... 40 5.0
25emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chro... 40 5.0
26gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, c... 40 5.0
27emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, c... 40 5.0
28gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Canc... 40 5.0
29gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosom... 40 5.0
30gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, comp... 40 5.0
31gb|AC104810.5| Homo sapiens BAC clone RP11-641D2 from 4, complet... 40 5.0
32gb|AC021460.10| Homo sapiens chromosome 15, clone RP11-259F15, c... 40 5.0
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
34gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-5... 40 5.0
35gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, comple... 40 5.0
36gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell... 40 5.0
37gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 40 5.0
38gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complet... 40 5.0
39gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4 40 5.0
40dbj|AK099320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
41dbj|AK065665.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
42emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.0
43gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 40 5.0
44gb|AC163271.4| Mus musculus chromosome 7, clone RP24-353E13, com... 40 5.0
45emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4,... 40 5.0
46gb|AC134330.3| Mus musculus BAC clone RP24-311K19 from 7, comple... 40 5.0
47gb|AC126323.6| Homo sapiens chromosome 15, clone RP11-299H22, co... 40 5.0
48emb|AL731734.13| Mouse DNA sequence from clone RP23-26C7 on chro... 40 5.0 
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete
              sequence
          Length = 132981

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Plus

                                                                          
Query: 189    ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
              |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 122339 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 122398

                                                                          
Query: 249    catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
              |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 122399 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 122458

                                                
Query: 309    caacgaacccccagctggtgatctcctcaagctc 342
              |||| |||| |||  |||||||||| ||||||||
Sbjct: 122459 caacaaaccaccaattggtgatctcttcaagctc 122492
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>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence,
            complete sequence
          Length = 35334

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Plus

                                                                        
Query: 189  ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
            |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 1860 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 1919

                                                                        
Query: 249  catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
            |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 1920 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 1979

                                              
Query: 309  caacgaacccccagctggtgatctcctcaagctc 342
            |||| |||| |||  |||||||||| ||||||||
Sbjct: 1980 caacaaaccaccaattggtgatctcttcaagctc 2013
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Plus

                                                                            
Query: 189      ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
                |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 18217354 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 18217413

                                                                            
Query: 249      catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
                |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 18217414 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 18217473

                                                  
Query: 309      caacgaacccccagctggtgatctcctcaagctc 342
                |||| |||| |||  |||||||||| ||||||||
Sbjct: 18217474 caacaaaccaccaattggtgatctcttcaagctc 18217507



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 214      gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 273
                |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 17401391 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 17401332

                     
Query: 274      gtcca 278
                |||||
Sbjct: 17401331 gtcca 17401327
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Plus

                                                                            
Query: 189      ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
                |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 18210895 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 18210954

                                                                            
Query: 249      catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
                |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 18210955 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 18211014

                                                  
Query: 309      caacgaacccccagctggtgatctcctcaagctc 342
                |||| |||| |||  |||||||||| ||||||||
Sbjct: 18211015 caacaaaccaccaattggtgatctcttcaagctc 18211048



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 214      gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 273
                |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 17394932 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 17394873

                     
Query: 274      gtcca 278
                |||||
Sbjct: 17394872 gtcca 17394868
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>dbj|AK106105.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-C11, full
            insert sequence
          Length = 1562

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Minus

                                                                        
Query: 189  ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
            |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 1361 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 1302

                                                                        
Query: 249  catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
            |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 1301 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 1242

                                              
Query: 309  caacgaacccccagctggtgatctcctcaagctc 342
            |||| |||| |||  |||||||||| ||||||||
Sbjct: 1241 caacaaaccaccaattggtgatctcttcaagctc 1208
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>dbj|AK060848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E05, full
            insert sequence
          Length = 1461

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 125/154 (81%)
 Strand = Plus / Minus

                                                                        
Query: 189  ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
            |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 1260 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 1201

                                                                        
Query: 249  catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
            |||| ||||||||||| |||||| | |||||||||||| ||  ||    ||||| |||||
Sbjct: 1200 catgttccttgctcttgttcatgctatccaaatgctcgctgcggacgccgaacacggcat 1141

                                              
Query: 309  caacgaacccccagctggtgatctcctcaagctc 342
            |||| |||| |||  |||||||||| ||||||||
Sbjct: 1140 caacaaaccaccaattggtgatctcttcaagctc 1107
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>dbj|AK065159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B24, full
            insert sequence
          Length = 1411

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                        
Query: 189  ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
            |||||||||| || ||||| | | ||||||| || |  ||||| |||||||| ||||| |
Sbjct: 1324 ccttcatcttttctatccatgtgttgaaggaattcaccgtgttccggaagccaaggaatc 1265

                                                  
Query: 249  catgctccttgctcttattcatgttgtccaaatgctcg 286
            |||| ||||||||||| |||||| | ||||||||||||
Sbjct: 1264 catgttccttgctcttgttcatgctatccaaatgctcg 1227
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>gb|BT016933.1| Zea mays clone E04912703G08.c mRNA sequence
          Length = 430

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 126/157 (80%)
 Strand = Plus / Plus

                                                                       
Query: 189 ccttcatcttatcgatccaagcgatgaaggagttgatggtgttacggaagccgaggaacc 248
           |||||| ||| |||||||| | | |||| ||| |||  ||||| | |||||||||||| |
Sbjct: 220 ccttcagcttctcgatccatgtgttgaaagagctgacagtgttcctgaagccgaggaagc 279

                                                                       
Query: 249 catgctccttgctcttattcatgttgtccaaatgctcgatgtcgatattgaacatggcat 308
           ||||||||||||| || |||||| |||||| | ||| | | || | |   ||||||||||
Sbjct: 280 catgctccttgcttttgttcatgctgtccagaagctgggtctccacagcaaacatggcat 339

                                                
Query: 309 caacgaacccccagctggtgatctcctcaagctccgt 345
           | ||||||| |||  | |||||||| |||||||||||
Sbjct: 340 cgacgaaccaccaattcgtgatctcgtcaagctccgt 376
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
              map E30331S, complete sequence
          Length = 164820

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                          
Query: 214    gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 273
              |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 162318 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 162377

                   
Query: 274    gtcca 278
              |||||
Sbjct: 162378 gtcca 162382
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>gb|AC135598.4| Oryza sativa chromosome 3 BAC OSJNBb0021K20 genomic sequence, complete
              sequence
          Length = 137220

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 214    gaaggagttgatggtgttacggaagccgaggaacccatgctccttgctcttattcatgtt 273
              |||||| ||||  ||||| |||||||| ||||| || |||||||||||||| |||||| |
Sbjct: 123768 gaaggacttgaccgtgttgcggaagcctaggaagccgtgctccttgctcttgttcatggt 123709

                   
Query: 274    gtcca 278
              |||||
Sbjct: 123708 gtcca 123704
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>gb|AY738712.1| Digitalis thapsi progesterone 5-beta-reductase gene, complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 248  ccatgctccttgctcttattcat 270
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146
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>gb|AY738710.1| Digitalis mariana subsp. heywoodii progesterone 5-beta-reductase
            gene, complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 248  ccatgctccttgctcttattcat 270
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146
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>gb|AY585868.1| Digitalis purpurea putative progesterone 5-beta-reductase gene,
            complete cds
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 248  ccatgctccttgctcttattcat 270
            |||||||||||||||||||||||
Sbjct: 1168 ccatgctccttgctcttattcat 1146
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>emb|AJ310673.1|DPU310673 Digitalis purpurea mRNA for progesterone 5-beta-reductase (p5Br gene)
          Length = 1357

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 248  ccatgctccttgctcttattcat 270
            |||||||||||||||||||||||
Sbjct: 1102 ccatgctccttgctcttattcat 1080
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>ref|XM_479054.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1233

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 227  gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 276
            ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 1175 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 1126
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 227      gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 276
                ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 24502768 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 24502719
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>dbj|AP004230.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ2013_G04
          Length = 73667

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 227   gtgttacggaagccgaggaacccatgctccttgctcttattcatgttgtc 276
             ||||| ||||| || ||||| || |||||||||||||| |||||| ||||
Sbjct: 52578 gtgttccggaaccccaggaatccgtgctccttgctcttgttcatggtgtc 52529
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>gb|AC182490.3| Pan troglodytes BAC clone CH251-430P12 from chromosome 2, complete
              sequence
          Length = 158411

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 46     tacaacaattggcacaaataacagcatgtaact 78
              |||||||| | |||||||| |||||||||||||
Sbjct: 100377 tacaacaaattgcacaaatcacagcatgtaact 100409
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>gb|AC120782.25| Pan troglodytes clone rp43-45g12, complete sequence
          Length = 167170

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 46    tacaacaattggcacaaataacagcatgtaact 78
             |||||||| | |||||||| |||||||||||||
Sbjct: 44088 tacaacaaattgcacaaatcacagcatgtaact 44056
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>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence
          Length = 175834

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 90    caaattgataaatgagagataaaat 114
             |||||||||||||||||| ||||||
Sbjct: 89089 caaattgataaatgagagctaaaat 89065
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>gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, complete sequence
          Length = 195280

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 46     tacaacaattggcacaaataacagcatgtaact 78
              |||||||| | |||||||| |||||||||||||
Sbjct: 138998 tacaacaaattgcacaaatcacagcatgtaact 138966
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>ref|XM_473990.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  attcatgttgtccaaatgct 284
            ||||||||||||||||||||
Sbjct: 1181 attcatgttgtccaaatgct 1200
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>gb|U88165.1| Caenorhabditis elegans cosmid F54C1, complete sequence
          Length = 31433

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    aaattgataaatgagagataaaat 114
             ||||||| ||||||||||||||||
Sbjct: 28407 aaattgaaaaatgagagataaaat 28430
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>emb|AL772197.12| Human DNA sequence from clone RP11-24O6 on chromosome X Contains the 5'
             end of the SH3KBP1 gene for SH3-domain kinase binding
             protein 1 (CIN85), two novel genes and one CpG island,
             complete sequence
          Length = 106342

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   aatgggatctggtggcatac 131
             ||||||||||||||||||||
Sbjct: 92537 aatgggatctggtggcatac 92518
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>emb|AL138787.11| Human DNA sequence from clone RP4-665N4 on chromosome 1p34.1-35.3
             Contains the 3' end of the EIF2C3 gene for eukaryotic
             translation initiation factor 2C, 3, a putative novel
             transcript, a implantation-associated protein
             (DKFZp564K142) processed pseudogene, the TEKT2 gene for
             tektin 2 (testicular), the COL8A2 gene for collagen, type
             VIII, alpha 2, complete sequence
          Length = 128133

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   acaatagagtactagacaataaga 165
             |||||| |||||||||||||||||
Sbjct: 43571 acaatacagtactagacaataaga 43548
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>gb|AC113558.8| Homo sapiens chromosome 18, clone RP11-1130K19, complete sequence
          Length = 165957

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    ataaatgagagataaaatgg 116
             ||||||||||||||||||||
Sbjct: 68546 ataaatgagagataaaatgg 68527
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>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4
          Length = 198697

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   caaatgctcgatgtcgatat 296
             ||||||||||||||||||||
Sbjct: 99585 caaatgctcgatgtcgatat 99604
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>gb|AC159330.9| Mus musculus 10 BAC RP23-91L18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 224664

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tttatttgggtctggcttat 38
             ||||||||||||||||||||
Sbjct: 89814 tttatttgggtctggcttat 89833
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>gb|AC127343.3| Mus musculus BAC clone RP23-194I18 from chromosome 10, complete
            sequence
          Length = 198624

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   tttatttgggtctggcttat 38
            ||||||||||||||||||||
Sbjct: 2877 tttatttgggtctggcttat 2896
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>gb|AC068522.7| Homo sapiens chromosome 8, clone RP11-23K11, complete sequence
          Length = 146952

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ttattcatgttgtccaaatg 282
             ||||||||||||||||||||
Sbjct: 96854 ttattcatgttgtccaaatg 96873
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>gb|AC104810.5| Homo sapiens BAC clone RP11-641D2 from 4, complete sequence
          Length = 165432

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     atgtaactaatttcagaagc 90
              ||||||||||||||||||||
Sbjct: 135692 atgtaactaatttcagaagc 135711
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>gb|AC021460.10| Homo sapiens chromosome 15, clone RP11-259F15, complete sequence
          Length = 146698

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 278    aaatgctcgatgtcgatattgaacatgg 305
              ||||||| ||||| ||||||||||||||
Sbjct: 139479 aaatgcttgatgttgatattgaacatgg 139452
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 265      attcatgttgtccaaatgct 284
                ||||||||||||||||||||
Sbjct: 32037339 attcatgttgtccaaatgct 32037320
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>gb|AC009453.13|AC009453 Homo sapiens chromosome 18, clone RP11-59F14, complete sequence
          Length = 168947

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ataaatgagagataaaatgg 116
              ||||||||||||||||||||
Sbjct: 162091 ataaatgagagataaaatgg 162110
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>gb|AC018804.9| Homo sapiens BAC clone RP11-397H17 from 2, complete sequence
          Length = 195514

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 46    tacaacaattggcacaaataacagcatgtaac 77
             |||||||| | |||||||| ||||||||||||
Sbjct: 28664 tacaacaaattgcacaaatcacagcatgtaac 28633
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>gb|AC104607.15| Drosophila melanogaster X BAC RP98-19G9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 137639

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aatttcagaagcaaattgataaat 102
             ||||||| ||||||||||||||||
Sbjct: 58880 aatttcaaaagcaaattgataaat 58857
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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     aatttcagaagcaaattgataaat 102
              ||||||| ||||||||||||||||
Sbjct: 172634 aatttcaaaagcaaattgataaat 172611
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>gb|AC097108.5| Homo sapiens BAC clone RP11-745K4 from 4, complete sequence
          Length = 207516

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    atgtaactaatttcagaagc 90
             ||||||||||||||||||||
Sbjct: 22775 atgtaactaatttcagaagc 22794
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>gb|AF096370.1|F11O4 Arabidopsis thaliana BAC F11O4
          Length = 72872

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  caaatgctcgatgtcgatat 296
            ||||||||||||||||||||
Sbjct: 3992 caaatgctcgatgtcgatat 3973
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>dbj|AK099320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033008O14, full
            insert sequence
          Length = 1787

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  attcatgttgtccaaatgct 284
            ||||||||||||||||||||
Sbjct: 1309 attcatgttgtccaaatgct 1328
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>dbj|AK065665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041I04, full
            insert sequence
          Length = 1859

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  attcatgttgtccaaatgct 284
            ||||||||||||||||||||
Sbjct: 1359 attcatgttgtccaaatgct 1378
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>emb|AL732334.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0323C08, complete
             sequence
          Length = 94903

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   attcatgttgtccaaatgct 284
             ||||||||||||||||||||
Sbjct: 20660 attcatgttgtccaaatgct 20641
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
              sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 79     aatttcagaagcaaattgataaat 102
              ||||||| ||||||||||||||||
Sbjct: 199523 aatttcaaaagcaaattgataaat 199500
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>gb|AC163271.4| Mus musculus chromosome 7, clone RP24-353E13, complete sequence
          Length = 131940

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tttatttgggtctggcttat 38
              ||||||||||||||||||||
Sbjct: 111162 tttatttgggtctggcttat 111181
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>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06,
             complete sequence
          Length = 141752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   attcatgttgtccaaatgct 284
             ||||||||||||||||||||
Sbjct: 58046 attcatgttgtccaaatgct 58027
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>gb|AC134330.3| Mus musculus BAC clone RP24-311K19 from 7, complete sequence
          Length = 142053

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tttatttgggtctggcttat 38
              ||||||||||||||||||||
Sbjct: 126450 tttatttgggtctggcttat 126469
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>gb|AC126323.6| Homo sapiens chromosome 15, clone RP11-299H22, complete sequence
          Length = 170132

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 278   aaatgctcgatgtcgatattgaacatgg 305
             ||||||| ||||| ||||||||||||||
Sbjct: 80575 aaatgcttgatgttgatattgaacatgg 80602
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>emb|AL731734.13| Mouse DNA sequence from clone RP23-26C7 on chromosome 2, complete
             sequence
          Length = 88618

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tttatttgggtctggcttat 38
             ||||||||||||||||||||
Sbjct: 82911 tttatttgggtctggcttat 82892


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,252,910
Number of Sequences: 3902068
Number of extensions: 3252910
Number of successful extensions: 62675
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62493
Number of HSP's gapped (non-prelim): 182
length of query: 375
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 353
effective length of database: 17,147,199,772
effective search space: 6052961519516
effective search space used: 6052961519516
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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