ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart58e09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC157580.5| Mus musculus chromosome 15, clone RP24-82M3, complete sequence Length = 207974 Score = 48.1 bits (24), Expect = 0.010 Identities = 24/24 (100%) Strand = Plus / Minus Query: 52 atataattacatgcatgtatatat 75 |||||||||||||||||||||||| Sbjct: 199156 atataattacatgcatgtatatat 199133
>gb|AC079005.9| Homo sapiens chromosome 17, clone RP11-153K8, complete sequence Length = 168811 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 24 atatataatctcacaactcaac 45 |||||||||||||||||||||| Sbjct: 104418 atatataatctcacaactcaac 104439
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aagctctagctatagctagga 117 ||||||||||||||||||||| Sbjct: 4043107 aagctctagctatagctagga 4043127 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 atgcatgtatatatggtaa 80 ||||||||||||||||||| Sbjct: 12554471 atgcatgtatatatggtaa 12554489
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 97 aagctctagctatagctagga 117 ||||||||||||||||||||| Sbjct: 56261 aagctctagctatagctagga 56241
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 97 aagctctagctatagctagga 117 ||||||||||||||||||||| Sbjct: 4043218 aagctctagctatagctagga 4043238 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 62 atgcatgtatatatggtaa 80 ||||||||||||||||||| Sbjct: 12551234 atgcatgtatatatggtaa 12551252
>gb|AC068544.7| Homo sapiens BAC clone RP11-369J9 from 2, complete sequence Length = 159397 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 catgtatatatggtaatacaa 85 ||||||||||||||||||||| Sbjct: 94273 catgtatatatggtaatacaa 94253
>emb|AL731838.19| Mouse DNA sequence from clone RP23-139O16 on chromosome X, complete sequence Length = 212472 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Plus Query: 55 taattacatgcatgtatatat 75 ||||||||||||||||||||| Sbjct: 94270 taattacatgcatgtatatat 94290
>gb|AE001426.1| Plasmodium falciparum 3D7 chromosome 2 section 63 of 73 of the complete sequence Length = 12029 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 2660 atataattacatgcatgtat 2679
>gb|BC075468.1| Xenopus tropicalis MGC89272 protein, mRNA (cDNA clone MGC:89272 IMAGE:6977016), complete cds Length = 1919 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 1122 atataattacatgcatgtat 1141
>gb|AC135671.3| Mus musculus BAC clone RP23-440D14 from chromosome 17, complete sequence Length = 188307 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 107483 atatatatataatctcacaa 107502
>emb|AL773599.11| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 attacatgcatgtatatatg 76 |||||||||||||||||||| Sbjct: 36423 attacatgcatgtatatatg 36442
>emb|CR388017.7| Zebrafish DNA sequence from clone CH211-283H24 in linkage group 7, complete sequence Length = 111978 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 106190 atataattacatgcatgtat 106209
>gb|AC122818.4| Mus musculus BAC clone RP23-243O16 from 17, complete sequence Length = 167735 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 tacatataattacatgcatgtatatatg 76 |||||||||||| |||||||| |||||| Sbjct: 152168 tacatataattatatgcatgtgtatatg 152141
>emb|Z86062.1|HS121G13 Human DNA sequence from clone RP1-121G13 on chromosome 6q16 Contains the 3' end of the RNAH gene for an RNA helicase, the 5' end of the SIM1 gene for single-minded homolog 1 (Drosophila), an RP42 homolog pseudogene a novel gene and three CpG islands, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 atatatataatctcacaactcaac 45 ||||||||||||||| |||||||| Sbjct: 76003 atatatataatctcagaactcaac 75980
>emb|X16619.1|CRARG7 Chlamydomonas reinhardtii ARG7 gene for argininosuccinate lyase Length = 8670 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gtaatacaagtagtgcaatg 96 |||||||||||||||||||| Sbjct: 712 gtaatacaagtagtgcaatg 693
>emb|AL662980.3|OSJN00185 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0080E14, complete sequence Length = 148064 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgaatatatatataatctca 36 |||||||||||||||||||| Sbjct: 16870 cgaatatatatataatctca 16851
>emb|AL606605.4|OSJN00049 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089E12, complete sequence Length = 154111 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgaatatatatataatctca 36 |||||||||||||||||||| Sbjct: 133310 cgaatatatatataatctca 133291
>emb|CR926887.9| Zebrafish DNA sequence from clone DKEY-147L14 in linkage group 20, complete sequence Length = 184926 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 92452 atatatatataatctcacaa 92471
>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE Length = 199033 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aattaagaacaagaacagca 136 |||||||||||||||||||| Sbjct: 128002 aattaagaacaagaacagca 128021
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2, complete sequence Length = 200950 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 181168 atataattacatgcatgtat 181187
>gb|AC091646.6| Homo sapiens chromosome 18, clone RP11-433A23, complete sequence Length = 187755 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 153130 atatatatataatctcacaa 153111
>emb|BX293994.28| Zebrafish DNA sequence from clone DKEY-256K14 in linkage group 10, complete sequence Length = 210640 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 244 atataattacatgcatgtat 225
>gb|AC020923.9| Homo sapiens chromosome 5 clone CTD-2123J17, complete sequence Length = 159973 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 120 atatatatataatctcacaa 139
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147859 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aatatatatataatctcaca 38 |||||||||||||||||||| Sbjct: 58697 aatatatatataatctcaca 58716
>gb|AC079603.11| Homo sapiens 12 BAC RP11-798I13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164837 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 49935 atatatatataatctcacaa 49954
>gb|AC096865.2| Homo sapiens chromosome 18 clone RP11-600G22, complete sequence Length = 194277 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 53457 atatatatataatctcacaa 53476
>gb|AC016550.6| Homo sapiens chromosome 5 clone CTC-261N6, complete sequence Length = 88581 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 58288 atatatatataatctcacaa 58269
>gb|AC008863.8| Homo sapiens chromosome 5 clone CTD-2192G22, complete sequence Length = 152529 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 105319 atatatatataatctcacaa 105338
>gb|AF119412.1|AF119412 Lupinus albus 1-aminocyclopropane-1-carboxylate synthase 2 (ACS2) gene, partial cds Length = 3371 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 attacatgcatgtatatatg 76 |||||||||||||||||||| Sbjct: 201 attacatgcatgtatatatg 182
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgaatatatatataatctca 36 |||||||||||||||||||| Sbjct: 3789889 cgaatatatatataatctca 3789870
>ref|NM_001004960.1| Xenopus tropicalis MGC89272 protein (MGC89272), mRNA Length = 1919 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 1122 atataattacatgcatgtat 1141
>gb|AC010729.8| Homo sapiens BAC clone RP11-350H23 from 2, complete sequence Length = 191934 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcacaa 39 |||||||||||||||||||| Sbjct: 83284 atatatatataatctcacaa 83303
>emb|BX569780.6| Zebrafish DNA sequence from clone CH211-134A17 in linkage group 10, complete sequence Length = 187807 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 99782 atataattacatgcatgtat 99763
>gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147491 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tcaacctttacatataatta 60 |||||||||||||||||||| Sbjct: 107752 tcaacctttacatataatta 107771
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8, complete sequence Length = 234864 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 attaagaacaagaacagcaa 137 |||||||||||||||||||| Sbjct: 220547 attaagaacaagaacagcaa 220528 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 attaagaacaagaacagca 136 ||||||||||||||||||| Sbjct: 220924 attaagaacaagaacagca 220906
>emb|CT574565.2| Pan troglodytes chromosome X clone CH251-78I22 map Xq28, complete sequence Length = 170088 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 atataattacatgcatgtatatat 75 ||||||||||||| |||||||||| Sbjct: 31663 atataattacatgtatgtatatat 31686
>emb|CR361554.35| Zebrafish DNA sequence from clone CH211-222L15 in linkage group 6, complete sequence Length = 187638 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 attaagaacaagaacagcaa 137 |||||||||||||||||||| Sbjct: 175866 attaagaacaagaacagcaa 175847 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 118 attaagaacaagaacagca 136 ||||||||||||||||||| Sbjct: 176243 attaagaacaagaacagca 176225
>emb|CR376859.9| Zebrafish DNA sequence from clone CH211-197D4 in linkage group 10, complete sequence Length = 58467 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 atataattacatgcatgtat 71 |||||||||||||||||||| Sbjct: 1757 atataattacatgcatgtat 1776
>emb|AL954824.2| Mouse DNA sequence from clone RP23-326I8 on chromosome 4, complete sequence Length = 46151 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 attacatgcatgtatatatg 76 |||||||||||||||||||| Sbjct: 9729 attacatgcatgtatatatg 9710
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome Length = 4303871 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 aggaattaagaacaagaaca 133 |||||||||||||||||||| Sbjct: 4160580 aggaattaagaacaagaaca 4160599
>gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207847 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 35250 atatatatataatctcaca 35268
>ref|NM_185585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 540 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 caagaacagcaagcgaaac 144 ||||||||||||||||||| Sbjct: 471 caagaacagcaagcgaaac 453
>ref|XM_635200.1| Dictyostelium discoideum hypothetical protein (DDB0205273), partial mRNA Length = 1383 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 aagaacaagaacagcaagc 139 ||||||||||||||||||| Sbjct: 707 aagaacaagaacagcaagc 725
>ref|XM_633696.1| Dictyostelium discoideum hypothetical protein (DDB0185797), partial mRNA Length = 2202 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 atggtaatacaagtagtgc 92 ||||||||||||||||||| Sbjct: 1904 atggtaatacaagtagtgc 1922
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 125 acaagaacagcaagcgaaa 143 ||||||||||||||||||| Sbjct: 1956594 acaagaacagcaagcgaaa 1956576
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 57773 gaatatatatataatctca 57755
>gb|AC186394.1| Pan troglodytes chromosome 7 clone CH251-302F10, complete sequence Length = 183782 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 107818 atatatatataatctcaca 107836
>gb|AC116461.13| Mus musculus chromosome 10, clone RP23-463P8, complete sequence Length = 203737 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 103951 gaatatatatataatctca 103969
>gb|AC121267.17| Mus musculus chromosome 19, clone RP24-444E1, complete sequence Length = 160720 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 tacatataattacatgcat 67 ||||||||||||||||||| Sbjct: 104589 tacatataattacatgcat 104607
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 136820 gaatatatatataatctca 136838
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0025G07, complete sequence Length = 167136 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 60242 gaatatatatataatctca 60260
>gb|AC093673.4| Homo sapiens BAC clone RP11-563K23 from 7, complete sequence Length = 33449 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 ggggcgaatatatatataa 31 ||||||||||||||||||| Sbjct: 28496 ggggcgaatatatatataa 28514
>gb|AC140463.2| Mus musculus BAC clone RP24-348D8 from chromosome 14, complete sequence Length = 159158 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 ttacatgcatgtatatatg 76 ||||||||||||||||||| Sbjct: 102033 ttacatgcatgtatatatg 102015
>gb|AC146204.3| Pan troglodytes BAC clone RP43-25M3 from 7, complete sequence Length = 188265 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 85709 atatatatataatctcaca 85691
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence Length = 181083 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 14923 atatatatataatctcaca 14941
>gb|AC145475.1| Pan troglodytes BAC clone RP43-34K7 from 7, complete sequence Length = 136914 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tatatatataatctcacaa 39 ||||||||||||||||||| Sbjct: 72381 tatatatataatctcacaa 72363
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone OSJNBb0026K11, complete sequence Length = 129643 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 125830 gaatatatatataatctca 125848
>emb|BX511036.18| Zebrafish DNA sequence from clone DKEY-279D7 in linkage group 6, complete sequence Length = 164653 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 52 atataattacatgcatgta 70 ||||||||||||||||||| Sbjct: 9589 atataattacatgcatgta 9571
>emb|AL603887.3| Human DNA sequence from clone RP13-36D22 on chromosome 13, complete sequence Length = 64045 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 39795 atatatatataatctcaca 39777
>gb|AE014821.1| Plasmodium falciparum 3D7 chromosome 14 section 6 of 13 of the complete sequence Length = 250823 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 188426 atatatatataatctcaca 188408
>emb|AL356441.16| Human DNA sequence from clone RP11-306I1 on chromosome 1 Contains the 5' end of a novel gene (FLJ35813), a ribosomal protein S2 (RPS2) pseudogene, a novel gene, the 5' end of the MGST3 gene for microsomal glutathione S-transferase 3 and a CpG island, complete sequence Length = 75914 Score = 38.2 bits (19), Expect = 10.0 Identities = 25/27 (92%) Strand = Plus / Plus Query: 50 acatataattacatgcatgtatatatg 76 ||||||| |||||||||||||||||| Sbjct: 10013 acatatacatacatgcatgtatatatg 10039
>emb|AL353665.13| Human DNA sequence from clone RP11-11K16 on chromosome 13 Contains an ATPase pseudogene. the 5' end of a novel gene and two novel genes, complete sequence Length = 66000 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 182 tcttgttgtaatactcttg 200 ||||||||||||||||||| Sbjct: 39825 tcttgttgtaatactcttg 39807
>emb|AL353754.10| Human DNA sequence from clone RP11-401E9 on chromosome 10 Contains the 3' end of the ATP5C1 gene for ATP synthase H+ transporting mitochondrial F1 complex gamma polypeptide 1, the 5' end of the TAF3 gene for TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (TAF140,TAFII140), a mitochondrial ribosomal protein L13 (MRPL13) pseudogene and a CpG island, complete sequence Length = 173316 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 aagaacaagaacagcaagc 139 ||||||||||||||||||| Sbjct: 79071 aagaacaagaacagcaagc 79089
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 atgcatgtatatatggtaa 80 ||||||||||||||||||| Sbjct: 33470 atgcatgtatatatggtaa 33452
>emb|AL135932.7| Human DNA sequence from clone RP4-535H23 on chromosome 11p12-14.1 Contains STSs, complete sequence Length = 143321 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 atatatatataatctcacaactc 42 |||||||||||||||| |||||| Sbjct: 105346 atatatatataatctcccaactc 105324
>emb|AL121881.35|HSJ171K16 Human DNA sequence from clone RP1-171K16 on chromosome Xq26.3-27.3 Contains the SPANXD gene for SPANX family member D, the SPANXA1 gene for sperm proteisperm protein associated with the nucleus X chromosome family member A1, the SPANXA2 gene for SPANX family member A2, the 3' end of a novel gene, and a novel gene, complete sequence Length = 185551 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 22850 atatatatataatctcaca 22868
>emb|AL133395.21| Human DNA sequence from clone RP11-446H13 on chromosome 10 Contains the 3' end of the gene for VPS10 domain receptor protein SORCS 1 and an RPL23A (60S ribosmal protein 23A) pseudogene, complete sequence Length = 217929 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 attacatgcatgtatatat 75 ||||||||||||||||||| Sbjct: 46667 attacatgcatgtatatat 46685
>emb|AL117351.12|HSJ837O21 Human DNA sequence from clone RP5-837O21 on chromosome 1p22 Contains the 5' end of the GCLM gene for glutamate-cysteine ligase modifier subunit, a pseudogene similar to part of NADH dehydrogenase 4 (MTND4), a NADH dehydrogenase 3 (MTND3) pseudogene, a cytochrome c oxidase III (MTCO3) pseudogene, a ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase II (MTCO2) pseudogene, a pseudogene similar to part of cytochrome c oxidase I (MTCO1), a pseudogene similar to part of NADH dehydrogenase 2 (MTND2), a coiled-coil-helix-coiled-coil-helix domain containing 2 (CHCHD2) pseudogene and a CpG island, complete sequence Length = 93800 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 983 atatatatataatctcaca 965
>emb|AL031591.19|HS353E16 Human DNA sequence from clone RP3-353E16 on chromosome 22q11.22-12.3, complete sequence Length = 189765 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 aattacatgcatgtatata 74 ||||||||||||||||||| Sbjct: 59805 aattacatgcatgtatata 59823
>gb|AC177795.2| Mus musculus chromosome 1, clone wi1-2624E11, complete sequence Length = 41084 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 39003 atatatatataatctcaca 39021
>gb|AC145794.2| Xenopus tropicalis clone CH216-159D20, complete sequence Length = 159085 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 tggggcgaatatatatata 30 ||||||||||||||||||| Sbjct: 49731 tggggcgaatatatatata 49713
>emb|CR457461.7| Zebrafish DNA sequence from clone DKEY-23O10 in linkage group 14, complete sequence Length = 213600 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 97744 atatatatataatctcaca 97726
>emb|CR788242.3| Zebrafish DNA sequence from clone DKEY-239H16 in linkage group 13, complete sequence Length = 143940 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 78744 atatatatataatctcaca 78726
>emb|CR407586.6| Zebrafish DNA sequence from clone CH211-283G6 in linkage group 18, complete sequence Length = 134596 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 84066 atatatatataatctcaca 84048
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 62 atgcatgtatatatggtaa 80 ||||||||||||||||||| Sbjct: 122518 atgcatgtatatatggtaa 122500
>gb|AC105278.2| Homo sapiens chromosome 1 clone RP5-1098H21, complete sequence Length = 135289 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 124299 atatatatataatctcaca 124281
>gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115279 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 33598 atatatatataatctcaca 33616
>ref|NM_014887.1| Homo sapiens phosphonoformate immuno-associated protein 5 (PFAAP5), mRNA Length = 2825 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 182 tcttgttgtaatactcttg 200 ||||||||||||||||||| Sbjct: 2119 tcttgttgtaatactcttg 2137
>dbj|AK123084.1| Homo sapiens cDNA FLJ41089 fis, clone ASTRO2003574 Length = 2692 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 182 tcttgttgtaatactcttg 200 ||||||||||||||||||| Sbjct: 1986 tcttgttgtaatactcttg 2004
>gb|AC025218.8| Homo sapiens chromosome 8, clone RP11-275J3, complete sequence Length = 132202 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 101396 atatatatataatctcaca 101378
>gb|AC009262.5| Homo sapiens chromosome 7 clone RP11-179B11, complete sequence Length = 149255 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 tatatatataatctcacaa 39 ||||||||||||||||||| Sbjct: 35606 tatatatataatctcacaa 35624
>dbj|AK160840.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:3426407H23 product:3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1, full insert sequence Length = 2513 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 428 atatatatataatctcaca 410
>gb|AC027654.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-219K14, complete sequence Length = 223678 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 aatctcacaactcaacctt 48 ||||||||||||||||||| Sbjct: 5829 aatctcacaactcaacctt 5847
>gb|DP000002.1| Sminthopsis macroura target 1 genomic scaffold Length = 305394 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 110575 atatatatataatctcaca 110593
>gb|AC005686.1|AC005686 Homo sapiens clone GS1-234F24 from 7p14-15, complete sequence Length = 141387 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 tatatatataatctcacaa 39 ||||||||||||||||||| Sbjct: 64219 tatatatataatctcacaa 64201
>gb|AC010220.5| Homo sapiens chromosome 5 clone CTC-254O18, complete sequence Length = 29439 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 26978 atatatatataatctcaca 26996
>gb|AF332579.1|AF332579 Mus musculus small nuclear ribonucleoprotein N (Snrpn) gene, upstream reading frame exons U1, 1, 2, and 3 Length = 80730 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 16376 atatatatataatctcaca 16394
>gb|AF321237.1|AF321237 Homo sapiens chromosome 11p15.4 clone RPC11-610i20 P2-containing olfactory receptor gene cluster, complete sequence Length = 111126 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 63608 atatatatataatctcaca 63626
>gb|AC000105.41| Homo sapiens Chromosome 22q11.2 MDR Region, complete sequence Length = 90223 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 aattacatgcatgtatata 74 ||||||||||||||||||| Sbjct: 83659 aattacatgcatgtatata 83677
>gb|AC004032.7| Homo sapiens Chromosome 22q11.2 BAC Clone b437g10 In BCRL2-GGT Region, complete sequence Length = 200685 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 aattacatgcatgtatata 74 ||||||||||||||||||| Sbjct: 173767 aattacatgcatgtatata 173785
>gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; putative ankyrin-related protein and cystic fibrosis transmembrane conductance regulator (CFTR) genes, complete cds; and unknown gene Length = 357856 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 aatctcacaactcaacctt 48 ||||||||||||||||||| Sbjct: 317112 aatctcacaactcaacctt 317130
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tgcatgtatatatggtaat 81 ||||||||||||||||||| Sbjct: 18372940 tgcatgtatatatggtaat 18372922
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 28252970 gaatatatatataatctca 28252952
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 54 ataattacatgcatgtatatatg 76 ||||||| ||||||||||||||| Sbjct: 15722115 ataattatatgcatgtatatatg 15722093 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 12078940 gaatatatatataatctca 12078922 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 10708161 gaatatatatataatctca 10708179 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 9899450 gaatatatatataatctca 9899432 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 9883645 gaatatatatataatctca 9883627
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 4592836 gaatatatatataatctca 4592818 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 caagaacagcaagcgaaac 144 ||||||||||||||||||| Sbjct: 2945601 caagaacagcaagcgaaac 2945583
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 12183130 gaatatatatataatctca 12183148
>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence Length = 162030 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 ttacatgcatgtatatatg 76 ||||||||||||||||||| Sbjct: 134579 ttacatgcatgtatatatg 134597
>gb|AC154182.2| Mus musculus BAC clone RP23-471C19 from chromosome 16, complete sequence Length = 180782 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 70649 atatatatataatctcaca 70667
>gb|AC046145.16|AC046145 Mus musculus 7 BAC RP23-306D24 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188606 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 1435 atatatatataatctcaca 1417
>gb|AC005034.2| Homo sapiens BAC clone RP11-342K6 from 2, complete sequence Length = 198587 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 50 acatataattacatgcatgtata 72 |||||||||||||||||| |||| Sbjct: 158100 acatataattacatgcatatata 158078
>gb|AC069019.8|AC069019 Mus musculus BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 196175 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 66 atgtatatatggtaataca 84 ||||||||||||||||||| Sbjct: 104527 atgtatatatggtaataca 104545
>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete sequence Length = 223861 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 158750 atatatatataatctcaca 158768
>gb|AC123968.2| Sminthopsis macroura clone 284J17, complete sequence Length = 61023 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 757 atatatatataatctcaca 775
>gb|AC067962.6| Homo sapiens BAC clone RP11-48K7 from 2, complete sequence Length = 73565 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 28909 atatatatataatctcaca 28927
>gb|AC136003.10| Mus musculus chromosome 15, clone RP23-191C24, complete sequence Length = 214651 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 143303 atatatatataatctcaca 143321
>gb|AC154205.1| Mus musculus BAC clone RP24-88I1 from chromosome 14, complete sequence Length = 219623 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 20 atatatatataatctcacaactc 42 ||||||||| ||||||||||||| Sbjct: 85504 atatatataaaatctcacaactc 85482
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 caagaacagcaagcgaaac 144 ||||||||||||||||||| Sbjct: 105747 caagaacagcaagcgaaac 105729
>dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0702F05 Length = 145018 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 caagaacagcaagcgaaac 144 ||||||||||||||||||| Sbjct: 33550 caagaacagcaagcgaaac 33532
>gb|AC158663.2| Mus musculus BAC RP23-16J8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216101 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 aatctcacaactcaacctt 48 ||||||||||||||||||| Sbjct: 121927 aatctcacaactcaacctt 121945
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 80200 gaatatatatataatctca 80182
>dbj|AP005305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0024C06 Length = 177529 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 130435 gaatatatatataatctca 130417
>dbj|AP005843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0024C16 Length = 137779 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 76074 gaatatatatataatctca 76056
>gb|AC007029.3|AC007029 Homo sapiens clone RP5-855F16, complete sequence Length = 95345 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 41255 atatatatataatctcaca 41237
>dbj|AP004396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0404D10 Length = 155069 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 54 ataattacatgcatgtatatatg 76 ||||||| ||||||||||||||| Sbjct: 36571 ataattatatgcatgtatatatg 36549
>dbj|AP005697.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0005C03 Length = 166423 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 46697 gaatatatatataatctca 46679 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 30892 gaatatatatataatctca 30874
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 163382 gaatatatatataatctca 163364 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 147577 gaatatatatataatctca 147559
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091M20 Length = 132976 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 5293 gaatatatatataatctca 5311
>emb|AL512548.1|B0311F12 Oryza sativa genomic DNA, chromosome 4, BAC clone: B0311F12, complete sequence Length = 55361 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 50690 gaatatatatataatctca 50672 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 41188 gaatatatatataatctca 41170
>emb|AL049783.1|HS130N43 Novel human gene mapping to chomosome 13 Length = 2825 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 182 tcttgttgtaatactcttg 200 ||||||||||||||||||| Sbjct: 2119 tcttgttgtaatactcttg 2137
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 59 tacatgcatgtatatatggtaat 81 |||||||||||| |||||||||| Sbjct: 1228072 tacatgcatgtagatatggtaat 1228050
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 174 ttgatcgatcttgttgtaa 192 ||||||||||||||||||| Sbjct: 88120 ttgatcgatcttgttgtaa 88138
>gb|AC005969.4|AC005969 Homo sapiens chromosome 17, clone hRPK.215_P_18, complete sequence Length = 147244 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 84583 atatatatataatctcaca 84601
>gb|AC162372.5| Mus musculus chromosome 19, clone RP23-177G18, complete sequence Length = 178801 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 tacatataattacatgcat 67 ||||||||||||||||||| Sbjct: 115072 tacatataattacatgcat 115054
>dbj|AP006300.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-1305B12, complete sequence Length = 154336 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 463 atatatatataatctcaca 481
>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete sequences Length = 153078 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 caagtagtgcaatgaagct 101 ||||||||||||||||||| Sbjct: 100807 caagtagtgcaatgaagct 100789
>dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-702P11, complete sequence Length = 150847 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 63052 atatatatataatctcaca 63070
>dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-728D14, complete sequence Length = 192926 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 173538 atatatatataatctcaca 173556
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 28237550 gaatatatatataatctca 28237532
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tgcatgtatatatggtaat 81 ||||||||||||||||||| Sbjct: 18299166 tgcatgtatatatggtaat 18299148
>emb|AL845344.4|CNS08CB6 Oryza sativa chromosome 12, . BAC OSJNBb0108O14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138585 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 63 tgcatgtatatatggtaat 81 ||||||||||||||||||| Sbjct: 24839 tgcatgtatatatggtaat 24821
>emb|AL928648.19| Mouse DNA sequence from clone RP23-379A6 on chromosome 4, complete sequence Length = 90837 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 69760 atatatatataatctcaca 69778
>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete sequence Length = 182810 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 atgtatatatggtaataca 84 ||||||||||||||||||| Sbjct: 110571 atgtatatatggtaataca 110553
>gb|AC140679.4| Mus musculus BAC clone RP24-511M8 from 1, complete sequence Length = 176052 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 128640 atatatatataatctcaca 128622
>emb|CT030683.6| Mouse DNA sequence from clone RP23-22O8 on chromosome 9, complete sequence Length = 126280 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 114867 gaatatatatataatctca 114849
>emb|Z75887.2|HS130N4 Human DNA sequence from clone RP1-130N4 on chromosome 13, complete sequence Length = 84169 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 182 tcttgttgtaatactcttg 200 ||||||||||||||||||| Sbjct: 57979 tcttgttgtaatactcttg 57961
>gb|AC002109.1|AC002109 Genomic sequence from Mouse 9, complete sequence Length = 160048 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 gaatatatatataatctca 36 ||||||||||||||||||| Sbjct: 39561 gaatatatatataatctca 39579
>dbj|AP005228.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-119P12, complete sequence Length = 186978 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 tacatgcatgtatatatgg 77 ||||||||||||||||||| Sbjct: 146306 tacatgcatgtatatatgg 146288
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 58 ttacatgcatgtatatatg 76 ||||||||||||||||||| Sbjct: 590540 ttacatgcatgtatatatg 590558
>emb|AL611924.14| Mouse DNA sequence from clone RP23-106K5 on chromosome 4, complete sequence Length = 164958 Score = 38.2 bits (19), Expect = 10.0 Identities = 22/23 (95%) Strand = Plus / Plus Query: 50 acatataattacatgcatgtata 72 ||||||||||| ||||||||||| Sbjct: 66784 acatataattatatgcatgtata 66806
>emb|AL592225.17| Mouse DNA sequence from clone RP23-278M14 on chromosome 1, complete sequence Length = 183397 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 8538 atatatatataatctcaca 8556
>emb|AL837521.6| Mouse DNA sequence from clone RP23-28I8 on chromosome 4, complete sequence Length = 230493 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 ttaagaacaagaacagcaa 137 ||||||||||||||||||| Sbjct: 2957 ttaagaacaagaacagcaa 2939
>emb|Z95703.2|HS433M19 Human DNA sequence from clone RP3-433M19 on chromosome Xq26.3-27.3, complete sequence Length = 126152 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 108181 atatatatataatctcaca 108163
>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence Length = 172485 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 atatatatataatctcaca 38 ||||||||||||||||||| Sbjct: 138572 atatatatataatctcaca 138554
>gb|M11255.1|DROGADPH2 D.melanogaster glyceraldehyde-3-phosphate dehydrogenase-2 gene, complete cds Length = 2677 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 ggggcgaatatatatataa 31 ||||||||||||||||||| Sbjct: 2190 ggggcgaatatatatataa 2172
>emb|AL772183.5| Mouse DNA sequence from clone RP23-36D21 on chromosome 4, complete sequence Length = 157805 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 tacatgcatgtatatatgg 77 ||||||||||||||||||| Sbjct: 5323 tacatgcatgtatatatgg 5305
>dbj|AP000874.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-760N9, complete sequences Length = 150638 Score = 38.2 bits (19), Expect = 10.0 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 tacatgcatgtatatatgg 77 ||||||||||||||||||| Sbjct: 19467 tacatgcatgtatatatgg 19449 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,310,187 Number of Sequences: 3902068 Number of extensions: 11310187 Number of successful extensions: 315363 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 312790 Number of HSP's gapped (non-prelim): 2573 length of query: 200 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 178 effective length of database: 17,147,199,772 effective search space: 3052201559416 effective search space used: 3052201559416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
