>IF39_HUMAN (P55884) Eukaryotic translation initiation factor 3 subunit 9|
           (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1
           homolog) (hPrt1)
          Length = 814

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = +2

Query: 278 GRDQPDGAPPPLLGVLRQGGLGAPVPAGGE 367
           G+ QP   PPP  G+LR  G GAP  AG E
Sbjct: 20  GQQQPAAEPPPAEGLLRPAGPGAPEAAGTE 49

>IF2_MYCLE (Q9Z5I9) Translation initiation factor IF-2|
          Length = 924

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P    G G PRPP    PR GGG P
Sbjct: 211 PGGAVGGGGPRPPRTGVPRPGGGRP 235

>ASF1_HELAN (P22357) Anther-specific protein SF18 precursor (Fragment)|
          Length = 161

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = +2

Query: 278 GRDQPDGAPPPLLGVLRQGGLGAPVPAGGE 367
           G D   GAPPP  G    GG GAP PAGG+
Sbjct: 126 GGDGGGGAPPPAGG---DGGGGAPPPAGGD 152



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P+PPAG G+P P   +    GGGAP
Sbjct: 113 PAPPAGGGSPPP---AGGDGGGGAP 134

>DIA_DROME (P48608) Protein diaphanous|
          Length = 1091

 Score = 31.6 bits (70), Expect = 0.49
 Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTP-RSGGGAP 295
           P PP G GAP PP    P R+GGG P
Sbjct: 515 PPPPGGGGAPPPPPPPMPGRAGGGPP 540



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P PP   G P PP     R GGG P
Sbjct: 558 PPPPGMGGPPPPPMPGMMRPGGGPP 582

>TTC9_HUMAN (Q92623) Tetratricopeptide repeat protein 9 (TPR repeat protein 9)|
           (Fragment)
          Length = 336

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 369 PSPPA-GTGAPRPPWRSTPRSGGGAPS 292
           PSPPA G G   PP    P  GGGAP+
Sbjct: 128 PSPPAAGEGQRPPPPLCVPGGGGGAPA 154

>WC1_NEUCR (Q01371) White collar 1 protein (WC1)|
          Length = 1167

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = -1

Query: 369 PSPPAGTGAPRP-PWRSTPRSGGGA 298
           P PP+ T AP P P+ STP SGGGA
Sbjct: 330 PPPPSVTNAPTPAPFTSTP-SGGGA 353

>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2|
          Length = 925

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -1

Query: 369 PSPPAGTGAP-RPPWRSTPRSGGGAPSG 289
           P  P G G P RP     PR GGG P G
Sbjct: 217 PPRPGGVGGPGRPARPGAPRPGGGRPGG 244

>MOBA_RHOBA (Q7UYZ6) Probable molybdopterin-guanine dinucleotide biosynthesis|
           protein A
          Length = 211

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 9/34 (26%)
 Frame = +2

Query: 290 PDGAPPPLLGVLRQGGLGA---------PVPAGG 364
           P  APPPLLGVL  GG  +         P P+GG
Sbjct: 9   PHAAPPPLLGVLLAGGRSSRMGTPKALLPHPSGG 42

>FZD8_HUMAN (Q9H461) Frizzled 8 precursor (Frizzled-8) (Fz-8) (hFz8)|
          Length = 694

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 363 PPAGTGAPRPPWRSTPRSGGGAPSG 289
           PP+G+G  RPP    P  GGG   G
Sbjct: 176 PPSGSGHGRPPGARPPHRGGGRGGG 200

>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 218 LSEELDRRVAALLHEADDVRGRDQPDGAPPPLLGVLRQGGLGAPVP 355
           L++   + + + L  A    G D     PPP L +LR GG   P P
Sbjct: 848 LTDACQQEMCSKLRGAQGPLGPDMESPLPPPPLSLLRPGGAPPPPP 893

>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression|
            inhibition of growth A)
          Length = 1790

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = -1

Query: 369  PSPPAGTGAPRPPWRSTPRSGGGAP 295
            P PP G G P PP    P  G G P
Sbjct: 1059 PPPPGGLGGPPPPPPPPPPGGFGGP 1083

>UBP35_HUMAN (Q9P2H5) Ubiquitin carboxyl-terminal hydrolase 35 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 35)
           (Ubiquitin-specific-processing protease 35)
           (Deubiquitinating enzyme 35)
          Length = 1017

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 278 RVRRRLRAAEQQPGDQVPQREVPVGVASQSDGRHGRLRLRE 156
           R RRR   +  +P + +  RE+P   ++Q  GR G  R R+
Sbjct: 604 RCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRK 644

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 366 SPPAGTGAPRPPWRSTPRSGGG 301
           +P  GT  P P  +STP SGGG
Sbjct: 635 TPEPGTSQPMPLSKSTPSSGGG 656

>HMGX7_CHICK (P50223) Homeobox protein GHOX-7 (CHOX-7) (Hox-7)|
          Length = 288

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
 Frame = +2

Query: 278 GRDQPDGAPPPL------LGVLRQGGLGAPVPAGG 364
           GRD P+G+ PPL      LG L      +P+P GG
Sbjct: 70  GRDGPEGSGPPLGSARANLGALTTEAPTSPLPLGG 104

>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P+ P G G PRPP   T +SG  AP
Sbjct: 734 PARPPGGGGPRPP--KTKKSGADAP 756

>NGCA_CHICK (Q03696) Neuronal-glial cell adhesion molecule precursor (Ng-CAM)|
          Length = 1266

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
 Frame = -1

Query: 369 PSPPAGTGAP----RPPWRSTPRSGGGAPSG 289
           P PP    AP    R  WR     GGG PSG
Sbjct: 723 PLPPQAWNAPWARYRVQWRPLEEPGGGGPSG 753

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -3

Query: 352 HGSAEAALAKYAEERRWRAIRLVTAAYVVGFVQQSSNPAIKFLREKFLSGLLARVMVD 179
           H    A  AK AEE  +  I++ +   ++GF + +   A+K + +      L+ V+VD
Sbjct: 546 HSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVD 603

>QID3_TRIHA (P52755) Cell wall protein qid3 precursor|
          Length = 143

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAPSG 289
           P PP  T AP PP  + P +G G  +G
Sbjct: 22  PPPPPPTYAPPPPTYTLPPNGNGGGNG 48

>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2|
           (Voltage-gated potassium channel subunit Kv11.1)
           (Ether-a-go-go-related gene potassium channel 1) (ERG1)
           (c-erg) (DERG) (Ether-a-go-go-related protein 1)
           (Eag-related protein 1)
          Length = 1158

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 360 PAGTGAPRPPWRSTPRSGGGAP 295
           P+G G P  PW  +P SG  +P
Sbjct: 916 PSGRGRPGGPWGESPSSGPSSP 937

>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAPS 292
           PSPPA   APRP   S   S   +P+
Sbjct: 418 PSPPAPAAAPRPSASSASSSAAASPA 443

>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1|
           kinase) (SAD1A)
          Length = 794

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P PP+    P P    +PRS GG P
Sbjct: 508 PPPPSARSTPLPGPPGSPRSSGGTP 532

>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)|
           (Intersectin-EH-binding protein 1) (Ibp1)
          Length = 566

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 363 PPAGTGAPRPPWRSTPRS 310
           PPA T  P PP R TP S
Sbjct: 446 PPAATPTPTPPTRKTPES 463

>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding|
           mitotic phosphoprotein)
          Length = 551

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 363 PPAGTGAPRPPWRSTPRS 310
           PPA T  P PP R TP S
Sbjct: 431 PPAATPTPTPPTRKTPES 448

>ADA2A_MOUSE (Q01338) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -2

Query: 299 RHPAGHGRVRRRLRAAEQQPGDQVPQREVPVGVASQSDGRHGRLR 165
           R P    R + + RA++ +PGD +P+R         S   HG  R
Sbjct: 309 RRPDRGPRAKGKTRASQVKPGDSLPRRGPGAAGPGASGSGHGEER 353

>ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor|
          Length = 132

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = -1

Query: 369 PSPPAGTGAPRPP--WRSTPRSGGGAP 295
           PSPPA  G+P PP    S P  GG  P
Sbjct: 101 PSPPADGGSPPPPADGGSPPVDGGSPP 127

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -3

Query: 352 HGSAEAALAKYAEERRWRAIRLVTAAYVVGFVQQSSNPAIKFLREKFLSGLLARVMVD 179
           H    A  AK AEE  +  I++ +   ++GF + +   A+K + +      L+ V+VD
Sbjct: 546 HSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVD 603

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = -3

Query: 352 HGSAEAALAKYAEERRWRAIRLVTAAYVVGFVQQSSNPAIKFLREKFLSGLLARVMVD 179
           H    A  AK AEE  +  I++ +   ++GF + +   A+K + +      L+ V+VD
Sbjct: 546 HSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVD 603

>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)|
          Length = 575

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 363 PPAGTGAPRPPWRSTPRS 310
           PPA T  P PP R TP S
Sbjct: 455 PPAATPTPTPPTRKTPES 472

>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -1

Query: 366  SPPAGTGAPRPPW-RSTPRSGGGAPSG 289
            +PP G G   PP  R  P  GG AP G
Sbjct: 1084 APPPGAGRAGPPGGRGMPAPGGAAPRG 1110

>Y2270_DEIRA (Q9RS57) UPF0078 membrane protein DR2270|
          Length = 195

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = +2

Query: 215 LLSEELDRRVAALLHE---ADDVRGRDQPDGAPPPLLGVLRQGGLGA 346
           +LS  L   VA +L+     +D+RGRD P G+     G  RQ G GA
Sbjct: 12  VLSYLLGSLVAGVLYSRGRGEDIRGRDLPGGS-----GTYRQYGKGA 53

>CAPU_DROME (Q24120) Protein cappuccino|
          Length = 1059

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGG 301
           P PP G+G+  PP    P  GGG
Sbjct: 524 PPPPPGSGSAPPPPPPAPIEGGG 546

>ENA_DROME (Q8T4F7) Protein enabled|
          Length = 834

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P PPA  G P P   + P  GGG P
Sbjct: 586 PPPPAMGGGPPPAPPAPPAMGGGPP 610

>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)|
          Length = 830

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P+PP G  AP P     PR G GAP
Sbjct: 771 PAPPGGRQAPMP-----PRGGPGAP 790

>ADA2A_CAVPO (Q60474) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR)
          Length = 450

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 302 ARHPAGHGRVRRRLRAAEQQPGDQVPQREVPVGVASQSDG 183
           AR P    R + + RA++ +PGD +P+R  P    S + G
Sbjct: 308 ARRPERGLRAKSKARASQVKPGDSLPRR-APGAAGSGTSG 346

>RX_RAT (Q9JLT7) Retinal homeobox protein Rx (Retina and anterior neural|
           fold homeobox protein)
          Length = 342

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 366 SPPAGTGAPRPPWRSTPRSGGGA 298
           S P G+  P  PW   P  GGGA
Sbjct: 232 SGPPGSALPLEPWLGPPLPGGGA 254

>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 369 PSPPAGTGAPRPPWRSTPRSGGGAP 295
           P PP   GAP  P  S P+   G P
Sbjct: 749 PGPPGSNGAPGSPGISGPKGDSGPP 773

>PRIL_THEVO (Q97BA1) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 327

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -3

Query: 325 KYAEERRWRAIRLVTAAYVVGFVQQSSNPAIKFLREKFLSGL 200
           KYA        RL   + + G V    + AIK LRE F+S +
Sbjct: 126 KYASRVTGSQYRLSNQSVIKGIVYCQKDVAIKILRESFVSNM 167


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,824,962
Number of Sequences: 219361
Number of extensions: 864578
Number of successful extensions: 4522
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4487
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)