ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY288952.1| Homo sapiens antigen MLAA-9 mRNA, partial 3'UTR s... 46 0.012
2emb|AJ338749.1|HSA338749 Homo sapiens genomic sequence surroundi... 46 0.012
3gb|AY915780.1| Schistosoma japonicum SJCHGC09703 protein mRNA, p... 44 0.048
4emb|AJ341633.1|HSA341633 Homo sapiens genomic sequence surroundi... 44 0.048
5emb|AJ340918.1|HSA340918 Homo sapiens genomic sequence surroundi... 44 0.048
6emb|AJ341581.1|HSA341581 Homo sapiens genomic sequence surroundi... 44 0.048
7emb|AJ325726.1|HSA325726 Homo sapiens genomic sequence surroundi... 44 0.048
8gb|AY812297.1| Schistosoma japonicum SJCHGC07001 protein mRNA, p... 42 0.19
9gb|AY915779.1| Schistosoma japonicum SJCHGC09702 protein mRNA, p... 42 0.19
10emb|BX537493.1|HSM805849 Homo sapiens mRNA; cDNA DKFZp779N1911 (... 42 0.19
11gb|AF267994.1|AF267992S3 Homo sapiens muscle-specific protein (C... 42 0.19
12emb|BX933831.1| Gallus gallus finished cDNA, clone ChEST4c24 42 0.19
13emb|AJ341584.1|HSA341584 Homo sapiens genomic sequence surroundi... 42 0.19
14emb|CT033471.1| Platynereis dumerilii EST IB0AAA19CF05EM1 42 0.19
15gb|AY068966.1| Schmidtea mediterranea clone H.32.11b unknown mRN... 42 0.19
16gb|AY808530.1| Schistosoma japonicum SJCHGC06841 protein mRNA, p... 40 0.75
17gb|DQ271060.1| Mustela vison clone V5H5 microsatellite sequence 40 0.75
18gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, comple... 40 0.75
19dbj|AK075917.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 0.75
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.75
21emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 ... 40 0.75
22emb|AJ341630.1|HSA341630 Homo sapiens genomic sequence surroundi... 40 0.75
23emb|AJ333590.1|HSA333590 Homo sapiens genomic sequence surroundi... 40 0.75
24emb|AJ333586.1|HSA333586 Homo sapiens genomic sequence surroundi... 40 0.75
25emb|AJ333581.1|HSA333581 Homo sapiens genomic sequence surroundi... 40 0.75
26gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HB... 40 0.75
27emb|AJ343845.1|HSA343845 Homo sapiens genomic sequence surroundi... 40 0.75
28emb|AJ343844.1|HSA343844 Homo sapiens genomic sequence surroundi... 40 0.75
29gb|BT018943.1| Zea mays clone Contig91.F mRNA sequence 38 3.0
30gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence 38 3.0
31gb|AF036767.1| Leishmania braziliensis repetitive DNA region 38 3.0
32gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complet... 38 3.0
33gb|AY452691.1| Nephila clavata mitochondrion, complete genome 38 3.0
34gb|AY915771.1| Schistosoma japonicum SJCHGC09692 protein mRNA, p... 38 3.0
35gb|AY812238.1| Schistosoma japonicum SJCHGC01965 protein mRNA, p... 38 3.0
36gb|AY811874.1| Schistosoma japonicum SJCHGC01957 protein mRNA, p... 38 3.0
37gb|AY810961.1| Schistosoma japonicum SJCHGC01954 protein mRNA, p... 38 3.0
38gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete se... 38 3.0
39gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, co... 38 3.0
40gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retro... 38 3.0
41emb|CR734573.2|CNS0GTKS Tetraodon nigroviridis full-length cDNA 38 3.0
42ref|XM_731882.1| Plasmodium chabaudi chabaudi hypothetical prote... 38 3.0
43ref|XM_726528.1| Plasmodium chabaudi chabaudi hypothetical prote... 38 3.0
44emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chr... 38 3.0
45emb|BX056909.1|CNS09G2P Single read from an extremity of a full-... 38 3.0
46gb|AY990922.1| Uncultured bacterium clone C4_G081 16S ribosomal ... 38 3.0
47dbj|AB252082.1| Uncultured bacterium gene for 16S rRNA, partial ... 38 3.0
48gb|DQ271118.1| Mustela vison clone IX4D13 microsatellite sequence 38 3.0
49gb|DQ418529.1| Uncultured Comamonadaceae bacterium clone PIC-D9 ... 38 3.0
50dbj|AK007455.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 38 3.0
51dbj|AK004381.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 38 3.0
52dbj|AK082185.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 38 3.0
53gb|AF182556.1|AF182556 Euglena gracilis alpha-tubulin gene, comp... 38 3.0
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.0
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.0
56gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, r... 38 3.0
57gb|AF463667.1| Mus musculus strain C57BL/6J cytokine gene cluste... 38 3.0
58gb|AF267747.1|AF267747 Mus musculus p47-phox gene, complete cds 38 3.0
59dbj|AK202125.1| Mus musculus cDNA, clone:Y1G0140H05, strand:minu... 38 3.0
60dbj|AK199668.1| Mus musculus cDNA, clone:Y1G0132A10, strand:plus... 38 3.0
61dbj|AK192334.1| Mus musculus cDNA, clone:Y1G0108J04, strand:minu... 38 3.0
62dbj|AB125309.1| Oryza sativa (japonica cultivar-group) SAPK8 mRN... 38 3.0
63gb|AC151354.2| Xenopus tropicalis clone ISB-50I7, complete sequence 38 3.0
64emb|AJ341637.1|HSA341637 Homo sapiens genomic sequence surroundi... 38 3.0
65emb|AJ341632.1|HSA341632 Homo sapiens genomic sequence surroundi... 38 3.0
66emb|AJ333592.1|HSA333592 Homo sapiens genomic sequence surroundi... 38 3.0
67emb|AJ333584.1|HSA333584 Homo sapiens genomic sequence surroundi... 38 3.0
68emb|AJ333580.1|HSA333580 Homo sapiens genomic sequence surroundi... 38 3.0
69emb|AJ337556.1|HSA337556 Homo sapiens genomic sequence surroundi... 38 3.0
70emb|AJ337398.1|HSA337398 Homo sapiens genomic sequence surroundi... 38 3.0
71emb|AJ326177.1|HSA326177 Homo sapiens genomic sequence surroundi... 38 3.0
72emb|AJ325591.1|HSA325591 Homo sapiens genomic sequence surroundi... 38 3.0
73emb|AJ325589.1|HSA325589 Homo sapiens genomic sequence surroundi... 38 3.0
74emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in l... 38 3.0
75gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77... 38 3.0
76emb|AM232820.1| Uncultured bacterium 16S rRNA gene, clone PIC-D9 38 3.0
77gb|L42378.1|PMNSLRND Phytomonas sp. (host Jatropha macrantha) sp... 38 3.0
78emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4,... 38 3.0
79emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, comp... 38 3.0
80gb|M11722.1|HUMTDTA Human terminal transferase mRNA, complete cds 38 3.0 
>gb|AY288952.1| Homo sapiens antigen MLAA-9 mRNA, partial 3'UTR sequence
          Length = 479

 Score = 46.1 bits (23), Expect = 0.012
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 22 ggggggggggggccccccaaaaa 44
          |||||||||||||||||||||||
Sbjct: 28 ggggggggggggccccccaaaaa 6
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>emb|AJ338749.1|HSA338749 Homo sapiens genomic sequence surrounding NotI site, clone NB1-183C
          Length = 918

 Score = 46.1 bits (23), Expect = 0.012
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 17  ttttgggggggggggggcccccc 39
           |||||||||||||||||||||||
Sbjct: 906 ttttgggggggggggggcccccc 884
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>gb|AY915780.1| Schistosoma japonicum SJCHGC09703 protein mRNA, partial cds
          Length = 609

 Score = 44.1 bits (22), Expect = 0.048
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 22  ggggggggggggccccccaaaa 43
           ||||||||||||||||||||||
Sbjct: 100 ggggggggggggccccccaaaa 121
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>emb|AJ341633.1|HSA341633 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FJ10R
          Length = 660

 Score = 44.1 bits (22), Expect = 0.048
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 17  ttttgggggggggggggccccc 38
           ||||||||||||||||||||||
Sbjct: 581 ttttgggggggggggggccccc 602
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>emb|AJ340918.1|HSA340918 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-GI23RS
          Length = 756

 Score = 44.1 bits (22), Expect = 0.048
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 17  ttttgggggggggggggccccc 38
           ||||||||||||||||||||||
Sbjct: 734 ttttgggggggggggggccccc 755
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>emb|AJ341581.1|HSA341581 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-EM19R
          Length = 575

 Score = 44.1 bits (22), Expect = 0.048
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 17  ttttgggggggggggggccccc 38
           ||||||||||||||||||||||
Sbjct: 563 ttttgggggggggggggccccc 542



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 17  ttttgggggggggggggccccccaaaa 43
           |||| |||||||||||| |||||||||
Sbjct: 564 tttttgggggggggggggcccccaaaa 538
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>emb|AJ325726.1|HSA325726 Homo sapiens genomic sequence surrounding NotI site, clone JNB-315S
          Length = 1040

 Score = 44.1 bits (22), Expect = 0.048
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 24  ggggggggggccccccaaaaag 45
           ||||||||||||||||||||||
Sbjct: 972 ggggggggggccccccaaaaag 993
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>gb|AY812297.1| Schistosoma japonicum SJCHGC07001 protein mRNA, partial cds
          Length = 442

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 17 ttttgggggggggggggcccc 37
          |||||||||||||||||||||
Sbjct: 21 ttttgggggggggggggcccc 1
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>gb|AY915779.1| Schistosoma japonicum SJCHGC09702 protein mRNA, partial cds
          Length = 619

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 27  gggggggccccccaaaaaggg 47
           |||||||||||||||||||||
Sbjct: 141 gggggggccccccaaaaaggg 121
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>emb|BX537493.1|HSM805849 Homo sapiens mRNA; cDNA DKFZp779N1911 (from clone DKFZp779N1911)
          Length = 3245

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 21   gggggggggggggccccccaa 41
            |||||||||||||||||||||
Sbjct: 3236 gggggggggggggccccccaa 3216
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>gb|AF267994.1|AF267992S3 Homo sapiens muscle-specific protein (C4orf5) gene, exons 2 and 3
          Length = 7234

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   ggggggggggccccccaaaaa 44
            |||||||||||||||||||||
Sbjct: 5988 ggggggggggccccccaaaaa 6008
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>emb|BX933831.1| Gallus gallus finished cDNA, clone ChEST4c24
          Length = 1097

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 19   ttgggggggggggggccccccaaaa 43
            |||||||||||||||| ||||||||
Sbjct: 1022 ttgggggggggggggcaccccaaaa 998
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>emb|AJ341584.1|HSA341584 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-EH11R
          Length = 582

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 22  ggggggggggggccccccaaa 42
           |||||||||||||||||||||
Sbjct: 559 ggggggggggggccccccaaa 579
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>emb|CT033471.1| Platynereis dumerilii EST IB0AAA19CF05EM1
          Length = 696

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  ggggggggggccccccaaaaa 44
           |||||||||||||||||||||
Sbjct: 611 ggggggggggccccccaaaaa 631
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>gb|AY068966.1| Schmidtea mediterranea clone H.32.11b unknown mRNA sequence
          Length = 471

 Score = 42.1 bits (21), Expect = 0.19
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  ggggggggggccccccaaaaa 44
           |||||||||||||||||||||
Sbjct: 438 ggggggggggccccccaaaaa 458
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>gb|AY808530.1| Schistosoma japonicum SJCHGC06841 protein mRNA, partial cds
          Length = 633

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  gggggggggggggcccccca 40
           ||||||||||||||||||||
Sbjct: 168 gggggggggggggcccccca 149
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>gb|DQ271060.1| Mustela vison clone V5H5 microsatellite sequence
          Length = 514

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           ||||||||||||||||||| ||||
Sbjct: 364 gggggggggggggcccccccaaaa 341



 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           |||||||||||| |||||||||||
Sbjct: 363 ggggggggggggcccccccaaaaa 340
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>gb|AC092264.2| Homo sapiens chromosome 1 clone RP4-640P3, complete sequence
          Length = 113330

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    tgggggggggggggccccccaaaa 43
             ||||||||||||||||| ||||||
Sbjct: 62207 tgggggggggggggccctccaaaa 62184
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>dbj|AK075917.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310068J10 product:unclassifiable, full
           insert sequence
          Length = 1715

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  gggggggggccccccaaaaa 44
           ||||||||||||||||||||
Sbjct: 846 gggggggggccccccaaaaa 827
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       gggggggggccccccaaaaa 44
                ||||||||||||||||||||
Sbjct: 23515018 gggggggggccccccaaaaa 23515037
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>emb|AL840630.16| Zebrafish DNA sequence from clone CH211-279L11 in linkage group 17,
             complete sequence
          Length = 149164

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttttgggggggggggggccc 36
             ||||||||||||||||||||
Sbjct: 86655 ttttgggggggggggggccc 86636
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>emb|AJ341630.1|HSA341630 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FG11R
          Length = 677

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           ||||||||||||||||||| ||||
Sbjct: 569 gggggggggggggcccccccaaaa 546



 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           |||||||||||| |||||||||||
Sbjct: 568 ggggggggggggcccccccaaaaa 545
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>emb|AJ333590.1|HSA333590 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FJ16R
          Length = 638

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  tgggggggggggggcccccc 39
           ||||||||||||||||||||
Sbjct: 477 tgggggggggggggcccccc 496
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>emb|AJ333586.1|HSA333586 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FI10R
          Length = 659

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           ||||||||||||||||||| ||||
Sbjct: 540 gggggggggggggcccccccaaaa 517



 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           |||||||||||| |||||||||||
Sbjct: 539 ggggggggggggcccccccaaaaa 516
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>emb|AJ333581.1|HSA333581 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FC17R
          Length = 645

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 25  gggggggggccccccaaaaa 44
           ||||||||||||||||||||
Sbjct: 573 gggggggggccccccaaaaa 554
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>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete
              sequence
          Length = 120525

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tttgggggggggggggcccc 37
              ||||||||||||||||||||
Sbjct: 120486 tttgggggggggggggcccc 120467
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>emb|AJ343845.1|HSA343845 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FH10R
          Length = 687

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  gggggggggggggcccccca 40
           ||||||||||||||||||||
Sbjct: 605 gggggggggggggcccccca 586



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 459 gggggggggggggcccccc 441
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>emb|AJ343844.1|HSA343844 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FG17R
          Length = 596

 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           ||||||||||||||||||| ||||
Sbjct: 454 gggggggggggggcccccccaaaa 431



 Score = 40.1 bits (20), Expect = 0.75
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gggggggggggggccccccaaaaa 44
           |||||||||||| |||||||||||
Sbjct: 453 ggggggggggggcccccccaaaaa 430
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>gb|BT018943.1| Zea mays clone Contig91.F mRNA sequence
          Length = 894

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 758 gggggggggggggcccccc 740
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>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     gggggggggggggcccccc 39
              |||||||||||||||||||
Sbjct: 113274 gggggggggggggcccccc 113256
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>gb|AF036767.1| Leishmania braziliensis repetitive DNA region
          Length = 1831

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 448 gggggggggggggcccccc 430
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>gb|AC006494.13| Drosophila melanogaster clone BACR48C17, complete sequence
          Length = 164501

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     ttttgggggggggggggcc 35
              |||||||||||||||||||
Sbjct: 151516 ttttgggggggggggggcc 151534
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>gb|AY452691.1| Nephila clavata mitochondrion, complete genome
          Length = 14436

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 21   gggggggggggggcccccc 39
            |||||||||||||||||||
Sbjct: 9675 gggggggggggggcccccc 9657
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>gb|AY915771.1| Schistosoma japonicum SJCHGC09692 protein mRNA, partial cds
          Length = 380

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 152 gggggggggggggcccccc 170
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>gb|AY812238.1| Schistosoma japonicum SJCHGC01965 protein mRNA, partial cds
          Length = 386

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 141 gggggggggggggcccccc 159
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>gb|AY811874.1| Schistosoma japonicum SJCHGC01957 protein mRNA, partial cds
          Length = 718

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 681 gggggggggggggcccccc 663



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 131 gggggggggggggcccccc 149
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>gb|AY810961.1| Schistosoma japonicum SJCHGC01954 protein mRNA, partial cds
          Length = 384

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 244 gggggggggggggcccccc 226
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>gb|AC147924.2| Xenopus tropicalis clone CH216-60D12, complete sequence
          Length = 186585

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 17     ttttgggggggggggggcc 35
              |||||||||||||||||||
Sbjct: 146020 ttttgggggggggggggcc 146002
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>gb|AC110566.17| Mus musculus chromosome 5, clone RP23-300A10, complete sequence
          Length = 175471

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ttttgggggggggggggcc 35
             |||||||||||||||||||
Sbjct: 48590 ttttgggggggggggggcc 48608
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>gb|DQ002407.1| Zea mays copia retrotransposon opie1, gypsy retrotransposon grande1,
              xilon1 retrotransposon, helitron B73_14578, gypsy
              retrotransposon huck1 and ruda retrotransposon, complete
              sequence
          Length = 152384

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     gggggggggggggcccccc 39
              |||||||||||||||||||
Sbjct: 106096 gggggggggggggcccccc 106078
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>emb|CR734573.2|CNS0GTKS Tetraodon nigroviridis full-length cDNA
          Length = 1427

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 102 gggggggggggggcccccc 120
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>ref|XM_731882.1| Plasmodium chabaudi chabaudi hypothetical protein (PC405608.00.0)
           partial mRNA
          Length = 820

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 597 gggggggggggggcccccc 615
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>ref|XM_726528.1| Plasmodium chabaudi chabaudi hypothetical protein (PC400006.00.0)
           partial mRNA
          Length = 212

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 159 gggggggggggggcccccc 141



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 134 gggggggggggggcccccc 152
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>emb|AL157712.14| Human DNA sequence from clone RP11-339B9 on chromosome 10 Contains two
             CpG islands, complete sequence
          Length = 131112

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 17    ttttgggggggggggggcc 35
             |||||||||||||||||||
Sbjct: 15152 ttttgggggggggggggcc 15134
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>emb|BX056909.1|CNS09G2P Single read from an extremity of a full-length cDNA clone made
          from Anopheles gambiae total adult females. 3-PRIME end
          of clone FK0AAC36CD07 of strain 6-9 of Anopheles
          gambiae (African malaria mosquito)
          Length = 150

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 gggggggggggggcccccc 39
          |||||||||||||||||||
Sbjct: 25 gggggggggggggcccccc 43
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>gb|AY990922.1| Uncultured bacterium clone C4_G081 16S ribosomal RNA gene, partial
           sequence
          Length = 1283

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 21  gggggggggggggccccccaaaaagggcccc 51
           ||||||||||||| |||| ||||||| ||||
Sbjct: 736 ggggggggggggggcccctaaaaaggtcccc 706
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>dbj|AB252082.1| Uncultured bacterium gene for 16S rRNA, partial sequence, isolate:
            PIC-D9
          Length = 1822

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   ggggggggggggcccccca 40
            |||||||||||||||||||
Sbjct: 1475 ggggggggggggcccccca 1493
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>gb|DQ271118.1| Mustela vison clone IX4D13 microsatellite sequence
          Length = 455

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 17  ttttgggggggggggggcc 35
           |||||||||||||||||||
Sbjct: 424 ttttgggggggggggggcc 442
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>gb|DQ418529.1| Uncultured Comamonadaceae bacterium clone PIC-D9 16S ribosomal RNA
            gene, partial sequence
          Length = 1822

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   ggggggggggggcccccca 40
            |||||||||||||||||||
Sbjct: 1475 ggggggggggggcccccca 1493
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>dbj|AK007455.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
          enriched library, clone:1810012I01 product:hypothetical
          Src homology 3 (SH3) domain containing protein, full
          insert sequence
          Length = 1401

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 19 ttgggggggggggggcccc 37
          |||||||||||||||||||
Sbjct: 92 ttgggggggggggggcccc 74
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>dbj|AK004381.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110065P19
           product:unclassifiable, full insert sequence
          Length = 1023

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 739 gggggggggggggcccccc 757



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 17  ttttgggggggggggggcccccc 39
           ||||||||||||||||| |||||
Sbjct: 734 ttttggggggggggggggccccc 756
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>dbj|AK082185.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
          enriched library, clone:C230021A06 product:SNF1-LIKE
          PROTEIN KINASE (FRAGMENT) homolog [Homo sapiens], full
          insert sequence
          Length = 2144

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 21 gggggggggggggcccccc 39
          |||||||||||||||||||
Sbjct: 33 gggggggggggggcccccc 15
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>gb|AF182556.1|AF182556 Euglena gracilis alpha-tubulin gene, complete cds
          Length = 5167

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 21   gggggggggggggcccccc 39
            |||||||||||||||||||
Sbjct: 1871 gggggggggggggcccccc 1889
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 21       gggggggggggggcccccc 39
                |||||||||||||||||||
Sbjct: 20696963 gggggggggggggcccccc 20696945
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 21       gggggggggggggcccccc 39
                |||||||||||||||||||
Sbjct: 17233852 gggggggggggggcccccc 17233834



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 21       gggggggggggggcccccc 39
                |||||||||||||||||||
Sbjct: 17233827 gggggggggggggcccccc 17233845
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>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone
             BACR02L12, complete sequence
          Length = 178931

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ttttgggggggggggggcc 35
             |||||||||||||||||||
Sbjct: 20833 ttttgggggggggggggcc 20851
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>gb|AF463667.1| Mus musculus strain C57BL/6J cytokine gene cluster, partial sequence
          Length = 1282

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 26   ggggggggccccccaaaaa 44
            |||||||||||||||||||
Sbjct: 1180 ggggggggccccccaaaaa 1198
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>gb|AF267747.1|AF267747 Mus musculus p47-phox gene, complete cds
          Length = 180686

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ttttgggggggggggggcc 35
             |||||||||||||||||||
Sbjct: 65083 ttttgggggggggggggcc 65101
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>dbj|AK202125.1| Mus musculus cDNA, clone:Y1G0140H05, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000030947, based on BLAT search
          Length = 409

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 17  ttttgggggggggggggcccccc 39
           |||||||||||||||| ||||||
Sbjct: 130 ttttggggggggggggccccccc 152
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>dbj|AK199668.1| Mus musculus cDNA, clone:Y1G0132A10, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000008893, based on BLAT search
          Length = 387

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  gggggggggccccccaaaa 43
           |||||||||||||||||||
Sbjct: 338 gggggggggccccccaaaa 356
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>dbj|AK192334.1| Mus musculus cDNA, clone:Y1G0108J04, strand:minus,
          reference:ENSEMBL:Mouse-Transcript-
          ENST:ENSMUST00000028190, based on BLAT search
          Length = 420

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 gggggggggggggcccccc 39
          |||||||||||||||||||
Sbjct: 60 gggggggggggggcccccc 78
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>dbj|AB125309.1| Oryza sativa (japonica cultivar-group) SAPK8 mRNA for
          serine/threonine protein kinase SAPK8, complete cds
          Length = 1450

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 21 gggggggggggggcccccc 39
          |||||||||||||||||||
Sbjct: 5  gggggggggggggcccccc 23
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>gb|AC151354.2| Xenopus tropicalis clone ISB-50I7, complete sequence
          Length = 56590

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ttttgggggggggggggcc 35
             |||||||||||||||||||
Sbjct: 54349 ttttgggggggggggggcc 54367
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>emb|AJ341637.1|HSA341637 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FK19R
          Length = 660

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 464 gggggggggggggcccccc 446



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 439 gggggggggggggcccccc 457



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 388 gggggggggggggcccccc 370
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>emb|AJ341632.1|HSA341632 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FN15R
          Length = 655

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 569 gggggggggggggcccccc 551



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 544 gggggggggggggcccccc 562



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 422 gggggggggggggcccccc 440



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 17  ttttgggggggggggggcccccc 39
           ||||||||||||||||| |||||
Sbjct: 417 ttttggggggggggggggccccc 439



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 403 gggggggggggggcccccc 385
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>emb|AJ333592.1|HSA333592 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FG19R
          Length = 638

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 396 gggggggggggggcccccc 414
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>emb|AJ333584.1|HSA333584 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FE10R
          Length = 609

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 17  ttttgggggggggggggcccccc 39
           ||||| |||||||||||||||||
Sbjct: 587 ttttgtgggggggggggcccccc 565
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>emb|AJ333580.1|HSA333580 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FD15R
          Length = 676

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 561 gggggggggggggcccccc 543
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>emb|AJ337556.1|HSA337556 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-FN12R
          Length = 669

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 534 gggggggggggggcccccc 516



 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 487 gggggggggggggcccccc 505
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>emb|AJ337398.1|HSA337398 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KH7C
          Length = 671

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  tttgggggggggggggccc 36
           |||||||||||||||||||
Sbjct: 548 tttgggggggggggggccc 566
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>emb|AJ326177.1|HSA326177 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-CK16C
          Length = 643

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 555 gggggggggggggcccccc 537
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>emb|AJ325591.1|HSA325591 Homo sapiens genomic sequence surrounding NotI site, clone NB6-643S
          Length = 940

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  ggggggggggccccccaaa 42
           |||||||||||||||||||
Sbjct: 636 ggggggggggccccccaaa 618
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>emb|AJ325589.1|HSA325589 Homo sapiens genomic sequence surrounding NotI site, clone NB6-669S
          Length = 966

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 31  gggccccccaaaaagggcc 49
           |||||||||||||||||||
Sbjct: 790 gggccccccaaaaagggcc 772
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>emb|CR352232.20| Zebrafish DNA sequence from clone DKEY-3L8 in linkage group 23,
             complete sequence
          Length = 206478

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 19    ttgggggggggggggccccccaaaaag 45
             ||||||||||||||| |||| ||||||
Sbjct: 71314 ttgggggggggggggaccccaaaaaag 71288
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>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete
              sequence
          Length = 224856

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     ttttgggggggggggggcc 35
              |||||||||||||||||||
Sbjct: 154343 ttttgggggggggggggcc 154361
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>emb|AM232820.1| Uncultured bacterium 16S rRNA gene, clone PIC-D9
          Length = 1822

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   ggggggggggggcccccca 40
            |||||||||||||||||||
Sbjct: 1475 ggggggggggggcccccca 1493
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>gb|L42378.1|PMNSLRND Phytomonas sp. (host Jatropha macrantha) spliced leader (SL RNA)
           gene, mini-exon
          Length = 316

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 306 gggggggggggggcccccc 288
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>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11,
             complete sequence
          Length = 124629

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    gggggggggggggcccccc 39
             |||||||||||||||||||
Sbjct: 43114 gggggggggggggcccccc 43096
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>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence
          Length = 137155

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 18   tttgggggggggggggccc 36
            |||||||||||||||||||
Sbjct: 6663 tttgggggggggggggccc 6645
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>gb|M11722.1|HUMTDTA Human terminal transferase mRNA, complete cds
          Length = 2068

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 21  gggggggggggggcccccc 39
           |||||||||||||||||||
Sbjct: 218 gggggggggggggcccccc 236


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,281,006
Number of Sequences: 3902068
Number of extensions: 1281006
Number of successful extensions: 364829
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 362634
Number of HSP's gapped (non-prelim): 2157
length of query: 74
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 53
effective length of database: 17,151,101,840
effective search space: 909008397520
effective search space used: 909008397520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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