ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart58d12 |
|---|---|
| Clone Library Name | barley_pub |
>MRAY_HELPY (O25235) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 353 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 251 FVLWVRKKPAEQSLISFLPKNMDK 180 F+LW + K A Q + SF+P + +K Sbjct: 40 FILWAKAKKANQPISSFVPSHQNK 63
>MRAY_HELPJ (Q9ZLY1) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 353 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -2 Query: 251 FVLWVRKKPAEQSLISFLPKNMDK 180 F+LW + K A Q + SF+P + +K Sbjct: 40 FILWAKAKKANQPISSFVPSHQNK 63
>XYLT2_RAT (Q9EPI0) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (Peptide O-xylosyltransferase 2) Length = 864 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 339 EELVAFLSKNRDKNFLKSHGR 359
>XYLT2_BOVIN (Q5QQ49) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (Peptide O-xylosyltransferase 2) Length = 867 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 338 EELVAFLSKNRDKNFLKSHGR 358
>XYLT2_PANTR (Q5QQ51) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (Peptide O-xylosyltransferase 2) Length = 865 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 339 EELVAFLSKNRDKNFLKSHGR 359
>XYLT2_MOUSE (Q9EPL0) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (Peptide O-xylosyltransferase 2) Length = 865 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 339 EELVAFLSKNRDKNFLKSHGR 359
>XYLT2_HUMAN (Q9H1B5) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (xylT-II) (XT-II) (Peptide O-xylosyltransferase 1) Length = 865 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 339 EELVAFLSKNRDKNFLKSHGR 359
>XYLT2_CANFA (Q5QQ50) Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II)| (Peptide O-xylosyltransferase 2) Length = 865 Score = 28.5 bits (62), Expect = 4.5 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 218 QSLISFLPKNMDKNMRRGHGK 156 + L++FL KN DKN + HG+ Sbjct: 339 EELVAFLSKNRDKNFLKSHGR 359
>Y2897_LEGPA (Q5X149) UPF0176 protein lpp2897| Length = 254 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +1 Query: 1 RYDPVFNISDRLGQSSWENAVKCTVIVLFHTDTEYEGKIALQRKITDT*IKNF 159 + DP +N L W ++ ++L T +YE ++ + + I+NF Sbjct: 102 KVDPSYNTGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENF 154
>Y2838_LEGPH (Q5ZRP2) UPF0176 protein lpg2838| Length = 254 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +1 Query: 1 RYDPVFNISDRLGQSSWENAVKCTVIVLFHTDTEYEGKIALQRKITDT*IKNF 159 + DP +N L W ++ ++L T +YE ++ + + I+NF Sbjct: 102 KVDPSYNAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENF 154
>Y2750_LEGPL (Q5WSX6) UPF0176 protein lpl2750| Length = 254 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/53 (22%), Positives = 24/53 (45%) Frame = +1 Query: 1 RYDPVFNISDRLGQSSWENAVKCTVIVLFHTDTEYEGKIALQRKITDT*IKNF 159 + DP +N L W ++ ++L T +YE ++ + + I+NF Sbjct: 102 KVDPSYNAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFKNAINPDIENF 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,105,975 Number of Sequences: 219361 Number of extensions: 795140 Number of successful extensions: 1368 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1354 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1368 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
