>gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 180454

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 270    ctcttgtaaaggaaagcttttatttca 296
              ||||||||||||||||| |||||||||
Sbjct: 134324 ctcttgtaaaggaaagcatttatttca 134350

>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 222518

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 270   ctcttgtaaaggaaagcttttatttca 296
             ||||||||||||||||| |||||||||
Sbjct: 27155 ctcttgtaaaggaaagcatttatttca 27181

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 53/62 (85%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                            
Query: 241      cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 300
                ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 26027090 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagac 26027033

                  
Query: 301      ca 302
                ||
Sbjct: 26027032 ca 26027031

>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 53/62 (85%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                         
Query: 241   cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 300
             ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 64948 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagac 64891

               
Query: 301   ca 302
             ||
Sbjct: 64890 ca 64889

>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0062J02
          Length = 151636

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 53/62 (85%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                        
Query: 241  cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 300
            ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 6335 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagac 6278

              
Query: 301  ca 302
            ||
Sbjct: 6277 ca 6276

>dbj|AK101953.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I24, full
            insert sequence
          Length = 2362

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 53/62 (85%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                        
Query: 241  cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 300
            ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 2301 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagac 2244

              
Query: 301  ca 302
            ||
Sbjct: 2243 ca 2242

>dbj|AK071267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086I22, full
           insert sequence
          Length = 1044

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 53/62 (85%), Gaps = 2/62 (3%)
 Strand = Plus / Minus

                                                                       
Query: 241 cacaagacaaaataaaacagagtgccgttctcttgtaaaggaaagcttttatttcaagac 300
           ||||| |||| |||||||||||||  ||||||||||||| |||    |||||||||||||
Sbjct: 947 cacaaaacaagataaaacagagtgttgttctcttgtaaacgaaga--tttatttcaagac 890

             
Query: 301 ca 302
           ||
Sbjct: 889 ca 888

>gb|AC083815.17|AC083815 Mus musculus 11 BAC RP23-270L8 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 173810

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 124    caaaggaaaattacagacactt 145
              ||||||||||||||||||||||
Sbjct: 129602 caaaggaaaattacagacactt 129581

>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9,
             complete sequence
          Length = 153947

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 54    aaatgcagtgaaatgtactgt 74
             |||||||||||||||||||||
Sbjct: 98598 aaatgcagtgaaatgtactgt 98578

>gb|AY217336.1| Papaver somniferum S-adenosyl-L-methionine:coclaurine
           N-methyltransferase mRNA, complete cds
          Length = 1286

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 175 atgtttttatccatgtttttc 195
           |||||||||||||||||||||
Sbjct: 968 atgtttttatccatgtttttc 948

>emb|BX901956.4| Zebrafish DNA sequence from clone CH211-284C12 in linkage group 3,
              complete sequence
          Length = 197042

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 48     atgggaaaatgcagtgaaatgtact 72
              |||||||||||||||||||| ||||
Sbjct: 165763 atgggaaaatgcagtgaaatctact 165739

>ref|XM_686143.1| PREDICTED: Danio rerio similar to Heparin sulfate
            N-deacetylase/N-sulfotransferase (N-HSST) (N-heparin
            sulfate sulfotransferase) (Glucosaminyl
            N-deacetylase/N-sulfotransferase) (LOC562765), mRNA
          Length = 3737

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 138  agacacttgaattaaaaactttcca 162
            ||||||||||||||||| |||||||
Sbjct: 3258 agacacttgaattaaaagctttcca 3234

>gb|AC154659.2| Mus musculus BAC clone RP24-269K6 from chromosome 17, complete sequence
          Length = 177071

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   gttctcttgtaaaggaaagct 287
             |||||||||||||||||||||
Sbjct: 62503 gttctcttgtaaaggaaagct 62523

>emb|BX649358.3| Zebrafish DNA sequence from clone CH211-69P6 in linkage group 13,
            complete sequence
          Length = 181307

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 138  agacacttgaattaaaaactttcca 162
            ||||||||||||||||| |||||||
Sbjct: 8187 agacacttgaattaaaagctttcca 8211

>emb|BX247881.6| Zebrafish DNA sequence from clone DKEY-10M1 in linkage group 13,
            complete sequence
          Length = 219382

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 138  agacacttgaattaaaaactttcca 162
            ||||||||||||||||| |||||||
Sbjct: 7880 agacacttgaattaaaagctttcca 7904

>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 48    atgggaaaatgcagtgaaatgtact 72
             |||||||||||||||||||| ||||
Sbjct: 59114 atgggaaaatgcagtgaaatctact 59138

>gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delta locus from bases 752679 to
             1000555 (section 4 of 5) of the Complete Nucleotide
             Sequence
          Length = 247877

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   aatagcacttcaaaggaaaa 133
             ||||||||||||||||||||
Sbjct: 53171 aatagcacttcaaaggaaaa 53152

>gb|AC124557.4| Mus musculus BAC clone RP23-247H15 from chromosome 19, complete
             sequence
          Length = 178544

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aggaaaattacagacacttg 146
             ||||||||||||||||||||
Sbjct: 57963 aggaaaattacagacacttg 57944

>emb|AL158064.16| Human DNA sequence from clone RP11-470M1 on chromosome 13, complete
              sequence
          Length = 160587

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    aaggaaagcttttatttcaa 297
              ||||||||||||||||||||
Sbjct: 144253 aaggaaagcttttatttcaa 144234

>emb|AL139148.12| Human DNA sequence from clone RP4-630J13 on chromosome 1p12-13.3
             Contains a high density lipoprotein binding protein
             (vigilin) (HDLBP) pseudogene, complete sequence
          Length = 92514

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   tctcctcatgtttttatcca 187
             ||||||||||||||||||||
Sbjct: 53874 tctcctcatgtttttatcca 53855

>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a
              ribosomal protein 7a (Rpl7a) pseudogene, complete sequence
          Length = 161600

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    actttccatgacctctcctc 174
              ||||||||||||||||||||
Sbjct: 104488 actttccatgacctctcctc 104507

>gb|AC098616.2| Homo sapiens chromosome 3 clone RP11-279I18, complete sequence
          Length = 159629

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     ctgaatacgaggggaaaata 117
              ||||||||||||||||||||
Sbjct: 134617 ctgaatacgaggggaaaata 134636

>gb|AC092503.2| Homo sapiens chromosome 3 clone RP11-539L2, complete sequence
          Length = 195568

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    ctgaatacgaggggaaaata 117
             ||||||||||||||||||||
Sbjct: 78336 ctgaatacgaggggaaaata 78355

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     agcacttcaaaggaaaatta 136
               ||||||||||||||||||||
Sbjct: 2393624 agcacttcaaaggaaaatta 2393605

>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence
          Length = 128950

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    agcacttcaaaggaaaattacaga 140
              |||||||||||||||||| |||||
Sbjct: 114012 agcacttcaaaggaaaataacaga 113989

>gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, complete sequence
          Length = 199218

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    atgtttttatccatgttttt 194
              ||||||||||||||||||||
Sbjct: 194816 atgtttttatccatgttttt 194797

>gb|AC020611.15| Homo sapiens 12 BAC RP11-1029F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188972

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    gtaaaggaaagcttttattt 294
              ||||||||||||||||||||
Sbjct: 143151 gtaaaggaaagcttttattt 143132

>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
              sequences
          Length = 196989

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     atgggaaaatgcagtgaaat 67
              ||||||||||||||||||||
Sbjct: 164767 atgggaaaatgcagtgaaat 164748

>emb|AL929191.9| Mouse DNA sequence from clone RP23-330G15 on chromosome 2, complete
              sequence
          Length = 192196

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 270    ctcttgtaaaggaaagcttttatt 293
              ||||||||||||||||| ||||||
Sbjct: 165500 ctcttgtaaaggaaagcatttatt 165523

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     agcacttcaaaggaaaatta 136
               ||||||||||||||||||||
Sbjct: 2393568 agcacttcaaaggaaaatta 2393549

>emb|AL928919.12| Mouse DNA sequence from clone RP24-239N23 on chromosome 4, complete
             sequence
          Length = 141866

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 117   agcacttcaaaggaaaattacaga 140
             |||||||||||||||||| |||||
Sbjct: 73027 agcacttcaaaggaaaataacaga 73004

>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 156258

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    agcacttcaaaggaaaatta 136
              ||||||||||||||||||||
Sbjct: 118815 agcacttcaaaggaaaatta 118796

>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence
          Length = 172079

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    aaattacagacacttgaattaaaa 154
              ||||||||||||||||| ||||||
Sbjct: 103111 aaattacagacacttgacttaaaa 103088

>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    aatagcacttcaaaggaaaa 133
              ||||||||||||||||||||
Sbjct: 805849 aatagcacttcaaaggaaaa 805830

>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete
             sequence
          Length = 171200

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   catgtttttcggtagaaatgaaat 209
             |||||||||||| |||||||||||
Sbjct: 54816 catgtttttcggaagaaatgaaat 54839


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,194,063
Number of Sequences: 3902068
Number of extensions: 4194063
Number of successful extensions: 95954
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95792
Number of HSP's gapped (non-prelim): 162
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)