ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470419.1| Oryza sativa (japonica cultivar-group), mRNA 119 6e-24
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 119 6e-24
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 119 6e-24
4gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 119 6e-24
5dbj|AK104846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 6e-24
6dbj|AK073581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 6e-24
7dbj|AK071162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 6e-24
8dbj|AB070259.1| Oryza sativa (japonica cultivar-group) OsRPN5 mR... 119 6e-24
9gb|AY104785.1| Zea mays PCO111061 mRNA sequence 98 2e-17
10gb|BT018925.1| Zea mays clone Contig44.F mRNA sequence 72 1e-09
11gb|BT018797.1| Zea mays clone EL01N0528E05.d mRNA sequence 72 1e-09
12gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete seq... 56 8e-05
13gb|AC174293.6| Medicago truncatula clone mth2-70h5, complete seq... 56 8e-05
14ref|NM_203029.1| Arabidopsis thaliana EMB2107 AT5G09900 (EMB2107... 54 3e-04
15ref|NM_121027.2| Arabidopsis thaliana EMB2107 AT5G09900 (EMB2107... 54 3e-04
16gb|AY230832.1| Arabidopsis thaliana 26S proteasome subunit RPN5a... 54 3e-04
17gb|AY113906.1| Arabidopsis thaliana putative 26S proteasome p55 ... 54 3e-04
18gb|AY034908.1| Arabidopsis thaliana putative 26S proteasome p55 ... 54 3e-04
19emb|BX831293.1|CNS0A0PR Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
20dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 3e-04
21gb|AY347860.1| Malus x domestica clone 10-6 26S proteasome regul... 52 0.001
22ref|XM_413692.1| PREDICTED: Gallus gallus similar to PML isoform... 44 0.29
23ref|XM_413690.1| PREDICTED: Gallus gallus similar to ISLR (LOC41... 44 0.29
24emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chrom... 44 0.29
25emb|AL160392.12| Human DNA sequence from clone RP11-121N13 on ch... 42 1.1
26ref|XM_775319.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.1
27emb|AL139080.11| Human DNA sequence from clone RP11-173N17 on ch... 42 1.1
28gb|AC159251.2| Mus musculus BAC clone RP24-113B8 from chromosome... 42 1.1
29gb|BC028866.1| Mus musculus jumonji domain containing 2A, mRNA (... 40 4.5
30ref|NM_172382.1| Mus musculus jumonji domain containing 2A (Jmjd... 40 4.5
31gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosom... 40 4.5
32gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosom... 40 4.5
33gb|AC129314.4| Mus musculus BAC clone RP23-365D12 from chromosom... 40 4.5
34gb|AC122187.3| Mus musculus BAC clone RP23-21P2 from 1, complete... 40 4.5
35gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complet... 40 4.5
36emb|AL136976.11| Human DNA sequence from clone RP3-474I3 on chro... 40 4.5
37emb|AL138703.10| Human DNA sequence from clone RP11-413N19 on ch... 40 4.5
38emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in... 40 4.5
39gb|AF191797.1| His2 virus, complete genome 40 4.5
40dbj|AK001427.1| Homo sapiens cDNA FLJ10565 fis, clone NT2RP2002954 40 4.5
41dbj|AK145066.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 4.5
42dbj|AK145947.1| Mus musculus 12 days pregnant adult female place... 40 4.5
43ref|XM_693987.1| PREDICTED: Danio rerio similar to ATP-binding c... 40 4.5
44dbj|AK172196.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 4.5
45gb|AC111139.19| Mus musculus chromosome 3, clone RP23-365L12, co... 40 4.5
46dbj|AK054095.1| Mus musculus 2 days pregnant adult female oviduc... 40 4.5
47gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, comp... 40 4.5
48ref|XM_233441.3| PREDICTED: Rattus norvegicus jumonji domain con... 40 4.5
49emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 i... 40 4.5
50gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 40 4.5
51dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07,... 40 4.5
52dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15,... 40 4.5
53dbj|AB040952.1| Homo sapiens mRNA for KIAA1519 protein, partial cds 40 4.5
54dbj|AK129187.1| Mus musculus mRNA for mKIAA0677 protein 40 4.5
55dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.5
56gb|BC001750.1| Homo sapiens centrosomal protein 72kDa, mRNA (cDN... 40 4.5
57gb|BC000132.2| Homo sapiens centrosomal protein 72kDa, mRNA (cDN... 40 4.5
58gb|AC116720.16| Mus musculus chromosome 3, clone RP23-223N19, co... 40 4.5
59ref|NM_018140.2| Homo sapiens centrosomal protein 72kDa (CEP72),... 40 4.5
60emb|AL626764.6| Mouse DNA sequence from clone RP23-94L18 on chro... 40 4.5
61dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 4.5 
>ref|XM_470419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1754

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                        
Query: 212  gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
            ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 1464 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 1405

                                                        
Query: 272  accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
            || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 1404 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 1361



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 71   cacgagttcccaaagcaaacaggcgatgct 100
            ||||||||||||||||||||||| ||||||
Sbjct: 1598 cacgagttcccaaagcaaacaggtgatgct 1569
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 212      gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 35530491 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 35530550

                                                            
Query: 272      accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
                || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 35530551 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 35530594



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 71       cacgagttcccaaagcaaacaggcgatgct 100
                ||||||||||||||||||||||| ||||||
Sbjct: 35530357 cacgagttcccaaagcaaacaggtgatgct 35530386
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 212      gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
                ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 35620563 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 35620622

                                                            
Query: 272      accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
                || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 35620623 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 35620666



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                              
Query: 71       cacgagttcccaaagcaaacaggcgatgct 100
                ||||||||||||||||||||||| ||||||
Sbjct: 35620429 cacgagttcccaaagcaaacaggtgatgct 35620458
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                         
Query: 212   gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
             ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 63454 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 63513

                                                         
Query: 272   accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
             || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 63514 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 63557



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 71    cacgagttcccaaagcaaacaggcgatgct 100
             ||||||||||||||||||||||| ||||||
Sbjct: 63320 cacgagttcccaaagcaaacaggtgatgct 63349
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>dbj|AK104846.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-H04, full
            insert sequence
          Length = 1690

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                        
Query: 212  gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
            ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 1428 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 1369

                                                        
Query: 272  accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
            || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 1368 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 1325



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 71   cacgagttcccaaagcaaacaggcgatgct 100
            ||||||||||||||||||||||| ||||||
Sbjct: 1562 cacgagttcccaaagcaaacaggtgatgct 1533
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>dbj|AK073581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048G13, full
            insert sequence
          Length = 1648

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                        
Query: 212  gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
            ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 1453 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 1394

                                                        
Query: 272  accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
            || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 1393 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 1350



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 71   cacgagttcccaaagcaaacaggcgatgct 100
            ||||||||||||||||||||||| ||||||
Sbjct: 1587 cacgagttcccaaagcaaacaggtgatgct 1558
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>dbj|AK071162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N11, full
            insert sequence
          Length = 1890

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                        
Query: 212  gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
            ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 1486 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 1427

                                                        
Query: 272  accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
            || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 1426 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 1383



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 71   cacgagttcccaaagcaaacaggcgatgct 100
            ||||||||||||||||||||||| ||||||
Sbjct: 1620 cacgagttcccaaagcaaacaggtgatgct 1591
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>dbj|AB070259.1| Oryza sativa (japonica cultivar-group) OsRPN5 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit5,
           partial cds
          Length = 1075

 Score =  119 bits (60), Expect = 6e-24
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                       
Query: 212 gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 805 gctttcaacaccgccttatggatcatcgtctccttgtgtatttggtgacagctcttctca 746

                                                       
Query: 272 accaggtccaggagcttctccaggttcgacgcccacgagttgag 315
           || || || ||||| ||||| ||||||| |||||| || |||||
Sbjct: 745 acaagatcgaggagtttctcgaggttcgccgcccaggaattgag 702



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 71  cacgagttcccaaagcaaacaggcgatgct 100
           ||||||||||||||||||||||| ||||||
Sbjct: 939 cacgagttcccaaagcaaacaggtgatgct 910
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>gb|AY104785.1| Zea mays PCO111061 mRNA sequence
          Length = 1893

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                        
Query: 212  gctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcc 271
            |||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| 
Sbjct: 1520 gctttcaataccgccttgtggatcatagtctccttgtgtatctggtgacagctcttctcg 1461

                                                     
Query: 272  accaggtccaggagcttctccaggttcgacgcccacgagtt 312
            || ||||| || |||| ||| ||||| |  |||||||||||
Sbjct: 1460 acaaggtcaagaagctgctcgaggtttgtagcccacgagtt 1420
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>gb|BT018925.1| Zea mays clone Contig44.F mRNA sequence
          Length = 1684

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  ctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcca 272
            |||| ||| ||| |||||||||||| ||||| || ||||| | ||||||||||||||| |
Sbjct: 1432 cttttaacgccgtcttgtggatcatggtctctttatgtatctcgtggcagctcttctcaa 1373

                                                    
Query: 273  ccaggtccaggagcttctccaggttcgacgcccacgagtt 312
            | |||||||| |||||||| ||| |||  ||||| |||||
Sbjct: 1372 cgaggtccagaagcttctcaaggctcgtggcccatgagtt 1333
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>gb|BT018797.1| Zea mays clone EL01N0528E05.d mRNA sequence
          Length = 1949

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  ctttcaacaccgccttgtggatcatcgtctccttgtgtatttggtggcagctcttctcca 272
            |||| ||| ||| |||||||||||| ||||| || ||||| | ||||||||||||||| |
Sbjct: 1731 cttttaacgccgtcttgtggatcatggtctctttatgtatctcgtggcagctcttctcaa 1672

                                                    
Query: 273  ccaggtccaggagcttctccaggttcgacgcccacgagtt 312
            | |||||||| |||||||| ||| |||  ||||| |||||
Sbjct: 1671 cgaggtccagaagcttctcaaggctcgtggcccatgagtt 1632
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>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence
          Length = 117720

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                 
Query: 242   tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctcca 293
             |||||||||||||| || |||||||||||||| || || || ||||||||||
Sbjct: 26909 tccttgtgtatttgatgacagctcttctccacaagatcaagcagcttctcca 26858



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctcca 293
            |||||||||||||| || |||||||||||||| || || || ||||||||||
Sbjct: 1878 tccttgtgtatttgatgacagctcttctccacaagatcaagcagcttctcca 1827
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>gb|AC174293.6| Medicago truncatula clone mth2-70h5, complete sequence
          Length = 132047

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 242   tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctcca 293
             |||||||||||||| || |||||||||||||| || || || ||||||||||
Sbjct: 46009 tccttgtgtatttgatgacagctcttctccacaagatcaagcagcttctcca 46060



 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 242   tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctcca 293
             |||||||||||||| || |||||||||||||| || || || ||||||||||
Sbjct: 20976 tccttgtgtatttgatgacagctcttctccacaagatcaagcagcttctcca 21027
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>ref|NM_203029.1| Arabidopsis thaliana EMB2107 AT5G09900 (EMB2107) transcript variant
            AT5G09900.2 mRNA, complete cds
          Length = 1615

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1397 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1338

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1337 gcccacgagtttagaatctcgttgctgtcct 1307
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>ref|NM_121027.2| Arabidopsis thaliana EMB2107 AT5G09900 (EMB2107) transcript variant
            AT5G09900.1 mRNA, complete cds
          Length = 1646

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1428 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1369

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1368 gcccacgagtttagaatctcgttgctgtcct 1338
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>gb|AY230832.1| Arabidopsis thaliana 26S proteasome subunit RPN5a (RPN5a) mRNA,
            complete cds
          Length = 1468

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1301 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1242

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1241 gcccacgagtttagaatctcgttgctgtcct 1211
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>gb|AY113906.1| Arabidopsis thaliana putative 26S proteasome p55 protein (At5g09900)
            mRNA, complete cds
          Length = 1329

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1295 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1236

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1235 gcccacgagtttagaatctcgttgctgtcct 1205
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>gb|AY034908.1| Arabidopsis thaliana putative 26S proteasome p55 protein (At5g09900)
            mRNA, complete cds
          Length = 1643

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1428 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1369

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1368 gcccacgagtttagaatctcgttgctgtcct 1338
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>emb|BX831293.1|CNS0A0PR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS76ZC01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1577

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Minus

                                                                        
Query: 242  tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
            |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 1397 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 1338

                                           
Query: 302  gcccacgagttgagcaccccgttgctgtcct 332
            ||||||||||| || | | ||||||||||||
Sbjct: 1337 gcccacgagtttagaatctcgttgctgtcct 1307
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>dbj|AB016893.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYH9
          Length = 82390

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                         
Query: 242   tccttgtgtatttggtggcagctcttctccaccaggtccaggagcttctccaggttcgac 301
             |||||||| ||||||||||| ||||| ||||| || || || ||||||||||  |||   
Sbjct: 42260 tccttgtgaatttggtggcaactcttttccacaagatctagaagcttctccaaattccct 42319

                                            
Query: 302   gcccacgagttgagcaccccgttgctgtcct 332
             ||||||||||| || | | ||||||||||||
Sbjct: 42320 gcccacgagtttagaatctcgttgctgtcct 42350
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>gb|AY347860.1| Malus x domestica clone 10-6 26S proteasome regulatory p55-like
           protein mRNA, partial cds
          Length = 257

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 245 ttgtgtatttggtggcagctcttctc 270
           ||||||||||||||||||||||||||
Sbjct: 62  ttgtgtatttggtggcagctcttctc 37
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>ref|XM_413692.1| PREDICTED: Gallus gallus similar to PML isoform 1 (LOC415304), mRNA
          Length = 1578

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 263 ctcttctccaccaggtccaggagcttctcc 292
           |||||||||||||| ||||| |||||||||
Sbjct: 89  ctcttctccaccagctccagcagcttctcc 60
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>ref|XM_413690.1| PREDICTED: Gallus gallus similar to ISLR (LOC415302), mRNA
          Length = 2595

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 263 ctcttctccaccaggtccaggagcttctcc 292
           |||||||||||||| ||||| |||||||||
Sbjct: 989 ctcttctccaccagctccagcagcttctcc 960
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>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete
              sequence
          Length = 205757

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 270    ccaccaggtccaggagcttctc 291
              ||||||||||||||||||||||
Sbjct: 105217 ccaccaggtccaggagcttctc 105238
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>emb|AL160392.12| Human DNA sequence from clone RP11-121N13 on chromosome 13 Contains the
             5' end of the DCAMKL1 gene for doublecortin and CaM
             kinase-like 1 (DCLK KIAA0369), a novel gene and two CpG
             islands, complete sequence
          Length = 106585

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 189   attcagttcaaaatggttttcaggc 213
             |||||||| ||||||||||||||||
Sbjct: 22090 attcagtttaaaatggttttcaggc 22114
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>ref|XM_775319.1| PREDICTED: Strongylocentrotus purpuratus similar to Glycoprotein
           3-alpha-L-fucosyltransferase A (Core
           alpha-(1,3)-fucosyltransferase) (LOC574917), mRNA
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 tccaggagcttctccaggttc 298
           |||||||||||||||||||||
Sbjct: 563 tccaggagcttctccaggttc 543
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>emb|AL139080.11| Human DNA sequence from clone RP11-173N17 on chromosome 13q12.11-12.3
             Contains the 3' end of the MIPEP gene for intermediate
             mitochondrial peptidase and a pseudogene similar to part
             of cytochrome c oxidase III (MTCO3), complete sequence
          Length = 81764

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 318   ccccgttgctgtcctgggctg 338
             |||||||||||||||||||||
Sbjct: 41965 ccccgttgctgtcctgggctg 41945
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>gb|AC159251.2| Mus musculus BAC clone RP24-113B8 from chromosome 12, complete sequence
          Length = 200896

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   ttcagttcaaaatggttttca 210
             |||||||||||||||||||||
Sbjct: 67892 ttcagttcaaaatggttttca 67912
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>gb|BC028866.1| Mus musculus jumonji domain containing 2A, mRNA (cDNA clone
           MGC:28562 IMAGE:4207552), complete cds
          Length = 3308

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 584 cttctccaccaggtccagga 565
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>ref|NM_172382.1| Mus musculus jumonji domain containing 2A (Jmjd2a), mRNA
          Length = 3308

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 584 cttctccaccaggtccagga 565
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>gb|AC126429.4| Mus musculus BAC clone RP24-403O23 from chromosome 6, complete sequence
          Length = 152532

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ccaggtccaggagcttctcc 292
              ||||||||||||||||||||
Sbjct: 149926 ccaggtccaggagcttctcc 149945
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>gb|AC122519.4| Mus musculus BAC clone RP24-462C10 from chromosome 6, complete sequence
          Length = 138242

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    ccaggtccaggagcttctcc 292
              ||||||||||||||||||||
Sbjct: 113516 ccaggtccaggagcttctcc 113497
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>gb|AC129314.4| Mus musculus BAC clone RP23-365D12 from chromosome 1, complete sequence
          Length = 200605

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   ggttttcaggctttcaacac 222
             ||||||||||||||||||||
Sbjct: 41338 ggttttcaggctttcaacac 41319
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>gb|AC122187.3| Mus musculus BAC clone RP23-21P2 from 1, complete sequence
          Length = 252095

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    ggttttcaggctttcaacac 222
              ||||||||||||||||||||
Sbjct: 223250 ggttttcaggctttcaacac 223231
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>gb|AC110378.4| Mus musculus BAC clone RP24-193H8 from 6, complete sequence
          Length = 166527

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ccaggtccaggagcttctcc 292
             ||||||||||||||||||||
Sbjct: 76993 ccaggtccaggagcttctcc 77012
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>emb|AL136976.11| Human DNA sequence from clone RP3-474I3 on chromosome 6 Contains part
             of the novel gene for KIAA1116, complete sequence
          Length = 55012

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tcattccctgtggttacagt 49
             ||||||||||||||||||||
Sbjct: 52058 tcattccctgtggttacagt 52077
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>emb|AL138703.10| Human DNA sequence from clone RP11-413N19 on chromosome 13 Contains
             FABP3P2 for fatty acid binding protein 3 pseudogene 2
             (FABP3P, FABP3-PS), complete sequence
          Length = 129866

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   attcagttcaaaatggtttt 208
             ||||||||||||||||||||
Sbjct: 34556 attcagttcaaaatggtttt 34575
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>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21,
             complete sequence
          Length = 153972

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    cgtcattccctgtggttacagtat 51
             ||||| ||||||||||||||||||
Sbjct: 24222 cgtcactccctgtggttacagtat 24199
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>gb|AF191797.1| His2 virus, complete genome
          Length = 16067

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 202  tggttttcaggctttcaaca 221
            ||||||||||||||||||||
Sbjct: 8180 tggttttcaggctttcaaca 8199
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>dbj|AK001427.1| Homo sapiens cDNA FLJ10565 fis, clone NT2RP2002954
          Length = 2355

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 260  cagctcttctccaccaggtccaggagcttctccagg 295
            |||||| | ||||||||||||| |||| ||||||||
Sbjct: 1316 cagctcctgtccaccaggtccaagagcgtctccagg 1281
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>dbj|AK145066.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN
           full-length enriched library, clone:G830034N12
           product:jumonji domain containing 2A, full insert
           sequence
          Length = 4607

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 667 cttctccaccaggtccagga 648
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>dbj|AK145947.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN
           full-length enriched library, clone:I530017E21
           product:jumonji domain containing 2A, full insert
           sequence
          Length = 4537

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 603 cttctccaccaggtccagga 584
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>ref|XM_693987.1| PREDICTED: Danio rerio similar to ATP-binding cassette transporter
           sub-family A member 7 (LOC570500), partial mRNA
          Length = 857

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 gtccaggagcttctccaggt 296
           ||||||||||||||||||||
Sbjct: 308 gtccaggagcttctccaggt 289
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>dbj|AK172196.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830103M15 product:unclassifiable, full
           insert sequence
          Length = 2696

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 273 ccaggtccaggagcttctcc 292
           ||||||||||||||||||||
Sbjct: 540 ccaggtccaggagcttctcc 521
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>gb|AC111139.19| Mus musculus chromosome 3, clone RP23-365L12, complete sequence
          Length = 188633

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   tccaggagcttctccaggtt 297
             ||||||||||||||||||||
Sbjct: 12727 tccaggagcttctccaggtt 12746
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>dbj|AK054095.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN
           full-length enriched library, clone:E230017M21
           product:weakly similar to GASC-1 PROTEIN [Homo sapiens],
           full insert sequence
          Length = 3268

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 645 cttctccaccaggtccagga 626
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>gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, complete sequence
          Length = 201464

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 260   cagctcttctccaccaggtccaggagcttctccagg 295
             |||||| | ||||||||||||| |||| ||||||||
Sbjct: 29357 cagctcctgtccaccaggtccaagagcgtctccagg 29322
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>ref|XM_233441.3| PREDICTED: Rattus norvegicus jumonji domain containing 2A (predicted)
            (Jmjd2a_predicted), mRNA
          Length = 3733

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  cttctccaccaggtccagga 284
            ||||||||||||||||||||
Sbjct: 1053 cttctccaccaggtccagga 1034
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>emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 in linkage group 21,
              complete sequence
          Length = 172409

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     cgtcattccctgtggttacagtat 51
              ||||| ||||||||||||||||||
Sbjct: 122781 cgtcactccctgtggttacagtat 122758
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      acaggcgatgctctcacttg 108
               ||||||||||||||||||||
Sbjct: 3633578 acaggcgatgctctcacttg 3633559
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>dbj|BS000215.2| Pan troglodytes chromosome 22 clone:RP43-183P07, map 22, complete
              sequences
          Length = 151501

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    tttggtggcagctcttctccacca 275
              ||||||||||||||||| ||||||
Sbjct: 120822 tttggtggcagctcttcaccacca 120845
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>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete
             sequences
          Length = 164711

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   tttggtggcagctcttctccacca 275
             ||||||||||||||||| ||||||
Sbjct: 17357 tttggtggcagctcttcaccacca 17380
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>dbj|AB040952.1| Homo sapiens mRNA for KIAA1519 protein, partial cds
          Length = 2352

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 260  cagctcttctccaccaggtccaggagcttctccagg 295
            |||||| | ||||||||||||| |||| ||||||||
Sbjct: 1311 cagctcctgtccaccaggtccaagagcgtctccagg 1276
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>dbj|AK129187.1| Mus musculus mRNA for mKIAA0677 protein
          Length = 4516

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 cttctccaccaggtccagga 284
           ||||||||||||||||||||
Sbjct: 536 cttctccaccaggtccagga 517
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>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   tttggtggcagctcttctccacca 275
             ||||||||||||||||| ||||||
Sbjct: 17419 tttggtggcagctcttcaccacca 17442
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>gb|BC001750.1| Homo sapiens centrosomal protein 72kDa, mRNA (cDNA clone MGC:952
            IMAGE:3533449), complete cds
          Length = 2360

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 260  cagctcttctccaccaggtccaggagcttctccagg 295
            |||||| | ||||||||||||| |||| ||||||||
Sbjct: 1299 cagctcctgtccaccaggtccaagagcgtctccagg 1264
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>gb|BC000132.2| Homo sapiens centrosomal protein 72kDa, mRNA (cDNA clone MGC:5307
            IMAGE:2899944), complete cds
          Length = 2366

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 260  cagctcttctccaccaggtccaggagcttctccagg 295
            |||||| | ||||||||||||| |||| ||||||||
Sbjct: 1312 cagctcctgtccaccaggtccaagagcgtctccagg 1277
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>gb|AC116720.16| Mus musculus chromosome 3, clone RP23-223N19, complete sequence
          Length = 203748

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   tccaggagcttctccaggtt 297
             ||||||||||||||||||||
Sbjct: 12247 tccaggagcttctccaggtt 12228
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>ref|NM_018140.2| Homo sapiens centrosomal protein 72kDa (CEP72), mRNA
          Length = 2366

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 260  cagctcttctccaccaggtccaggagcttctccagg 295
            |||||| | ||||||||||||| |||| ||||||||
Sbjct: 1312 cagctcctgtccaccaggtccaagagcgtctccagg 1277
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>emb|AL626764.6| Mouse DNA sequence from clone RP23-94L18 on chromosome 4, complete
              sequence
          Length = 219582

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 265    cttctccaccaggtccagga 284
              ||||||||||||||||||||
Sbjct: 138765 cttctccaccaggtccagga 138784
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>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292
             region, complete sequence
          Length = 186930

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 252   tttggtggcagctcttctccacca 275
             ||||||||||||||||| ||||||
Sbjct: 45206 tttggtggcagctcttcaccacca 45229


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,735,784
Number of Sequences: 3902068
Number of extensions: 2735784
Number of successful extensions: 53915
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53800
Number of HSP's gapped (non-prelim): 108
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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