ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FLS_CITUN (Q9ZWQ9) Flavonol synthase/flavanone 3-hydroxylase (EC... 32 0.28
2FLS_SOLTU (Q41452) Flavonol synthase/flavanone 3-hydroxylase (EC... 32 0.48
3FLS_PETHY (Q07512) Flavonol synthase/flavanone 3-hydroxylase (EC... 31 0.63
4VC02_VACCV (P17371) Kelch repeat protein C2 29 2.4
5VC02_VACCT (Q9JFG1) Kelch repeat protein C2 29 2.4
6VC02_VACCC (P21037) Kelch repeat protein C2 29 2.4
7VC02_RABPU (Q6RZS3) Kelch repeat protein C2 29 2.4
8VC02_ECTVM (Q8JLI4) Kelch repeat protein C2 29 2.4
9VC02_CWPXG (P87617) Kelch repeat protein C2 29 2.4
10FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC... 29 3.1
11CARA_THETN (Q8RBK1) Carbamoyl-phosphate synthase small chain (EC... 28 5.3
12RK4_SPIOL (O49937) 50S ribosomal protein L4, chloroplast precurs... 28 6.9

>FLS_CITUN (Q9ZWQ9) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS) (CitFLS)
          Length = 335

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 372 IEPVPDLLDDKRPPRYMKIKNKDY 301
           + P+P L+DD+ PP+Y   K KDY
Sbjct: 302 VGPLPQLVDDENPPKYKAKKFKDY 325



to top

>FLS_SOLTU (Q41452) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 349

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -3

Query: 381 EMDIEPVPDLLDDKRPPRYMKIKNKDYI 298
           E ++ P+P+L+++  PP++   K KDY+
Sbjct: 313 EHEVGPIPNLINEANPPKFKTKKYKDYV 340



to top

>FLS_PETHY (Q07512) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS)
          Length = 348

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 381 EMDIEPVPDLLDDKRPPRYMKIKNKDYI 298
           E ++ P+P LL +  PP++   K KDY+
Sbjct: 312 EHEVGPIPKLLSEANPPKFKTKKYKDYV 339



to top

>VC02_VACCV (P17371) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLETKK 286



to top

>VC02_VACCT (Q9JFG1) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLETKK 286



to top

>VC02_VACCC (P21037) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLETKK 286



to top

>VC02_RABPU (Q6RZS3) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLETKK 286



to top

>VC02_ECTVM (Q8JLI4) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLKTKK 286



to top

>VC02_CWPXG (P87617) Kelch repeat protein C2|
          Length = 512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 188 NKLHNCVYQISSLENQIQIFKVSMVRLPVAK 280
           N LHNC+Y I  + N   ++ VS V L   K
Sbjct: 256 NVLHNCLYIIGGMINNRHVYSVSRVDLKTKK 286



to top

>FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)|
           (EC 1.14.11.9) (FLS) (Fragment)
          Length = 291

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 381 EMDIEPVPDLLDDKRPPRYMKIKNKDYI 298
           +M + P+P+L  +  PP++  I  KDY+
Sbjct: 253 DMVVGPLPELTSEDDPPKFKPIAYKDYV 280



to top

>CARA_THETN (Q8RBK1) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 356

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -3

Query: 369 EPVPDLLDDKRPPRYMKIKNKDYIAKQTHIFATGKRTIDTLKI 241
           +PV DLL            NKDYI  Q H +A  + +ID  KI
Sbjct: 264 QPVKDLLT-----------NKDYITSQNHGYAVEEESIDKDKI 295



to top

>RK4_SPIOL (O49937) 50S ribosomal protein L4, chloroplast precursor (R-protein|
           L4)
          Length = 293

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 11  DTFYYLRFHKPTKLHNTLHKGLHTHKLGKRANT 109
           +TF  L+   P K    +H+GL TH   KR  T
Sbjct: 67  ETFLNLKTAPPEKARAVVHRGLITHLQNKRRGT 99


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,672,570
Number of Sequences: 219361
Number of extensions: 984858
Number of successful extensions: 2231
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2221
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top