>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 270      ctctttcatcgtcttggcgagctcaatgttgaagatgttgtcgttgtgtccccagagcag 329
                ||||||||||||| ||||||||||||||||||| ||||||||||| |  ||||| |||||
Sbjct: 25496061 ctctttcatcgtcatggcgagctcaatgttgaaaatgttgtcgttctccccccatagcag 25496120

                             
Query: 330      aagtattttctgc 342
                 ||||||||||||
Sbjct: 25496121 gagtattttctgc 25496133



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                            
Query: 169      aggaactccatgaggtgctggttgtaaacgcagggcctctccaggtgcacgagatgtccg 228
                ||||||||| |||||||||||||||| |||||||||||||| | ||| || || || || 
Sbjct: 25495852 aggaactccttgaggtgctggttgtagacgcagggcctctctatgtgaaccaggtgccct 25495911

                                                          
Query: 229      gccttatcaatgctctccagcatcgtcttctcgccgagctgc 270
                |||||    ||||||| |||||| | |||||| |||||||||
Sbjct: 25495912 gccttgctgatgctctgcagcattgccttctctccgagctgc 25495953



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                           
Query: 339      ctgcggcaagacggggacggtggcgtctttgttgctgaccacc 381
                ||||||||  ||||| |||||||||||||||||||||||||||
Sbjct: 25496961 ctgcggcagaacgggcacggtggcgtctttgttgctgaccacc 25497003

>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696E01
          Length = 194056

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 270   ctctttcatcgtcttggcgagctcaatgttgaagatgttgtcgttgtgtccccagagcag 329
             ||||||||||||| ||||||||||||||||||| ||||||||||| |  ||||| |||||
Sbjct: 23664 ctctttcatcgtcatggcgagctcaatgttgaaaatgttgtcgttctccccccatagcag 23723

                          
Query: 330   aagtattttctgc 342
              ||||||||||||
Sbjct: 23724 gagtattttctgc 23736



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 85/102 (83%)
 Strand = Plus / Plus

                                                                         
Query: 169   aggaactccatgaggtgctggttgtaaacgcagggcctctccaggtgcacgagatgtccg 228
             ||||||||| |||||||||||||||| |||||||||||||| | ||| || || || || 
Sbjct: 23455 aggaactccttgaggtgctggttgtagacgcagggcctctctatgtgaaccaggtgccct 23514

                                                       
Query: 229   gccttatcaatgctctccagcatcgtcttctcgccgagctgc 270
             |||||    ||||||| |||||| | |||||| |||||||||
Sbjct: 23515 gccttgctgatgctctgcagcattgccttctctccgagctgc 23556



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 339   ctgcggcaagacggggacggtggcgtctttgttgctgaccacc 381
             ||||||||  ||||| |||||||||||||||||||||||||||
Sbjct: 24564 ctgcggcagaacgggcacggtggcgtctttgttgctgaccacc 24606

>ref|XM_467386.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1020

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 259 tcgccgagctgctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
           ||||| ||||||||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 878 tcgcccagctgctctttcattttcttggcgagctctatgtcgaagatcttgtc 826

>dbj|AK059034.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-C07, full
            insert sequence
          Length = 1798

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 259  tcgccgagctgctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
            ||||| ||||||||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 1311 tcgcccagctgctctttcattttcttggcgagctctatgtcgaagatcttgtc 1259

>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 270    ctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
              |||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 119640 ctctttcattttcttggcgagctctatgtcgaagatcttgtc 119599

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 270      ctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
                |||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 29242991 ctctttcattttcttggcgagctctatgtcgaagatcttgtc 29243032

>emb|BX829553.1|CNS0A1DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB1ZH01 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1311

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 302  agatgttgtcgttgtgtcccca 323
            ||||||||||||||||||||||
Sbjct: 1154 agatgttgtcgttgtgtcccca 1175

>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 270   ctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
             |||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 40336 ctctttcattttcttggcgagctctatgtcgaagatcttgtc 40377

>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0680A05
          Length = 168092

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 270    ctctttcatcgtcttggcgagctcaatgttgaagatgttgtc 311
              |||||||||  ||||||||||||| |||| |||||| |||||
Sbjct: 132959 ctctttcattttcttggcgagctctatgtcgaagatcttgtc 133000

>ref|XM_477866.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 947

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 341 gcggcaagacggggacggtggcgt 364
           |||||||||||| |||||||||||
Sbjct: 110 gcggcaagacggcgacggtggcgt 133

>ref|XM_676716.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8539.2), mRNA
          Length = 609

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 agcttcagccgtggcgtatg 166
           ||||||||||||||||||||
Sbjct: 38  agcttcagccgtggcgtatg 19

>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence
          Length = 193890

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    tatcactcctttgaagcttc 152
              ||||||||||||||||||||
Sbjct: 101951 tatcactcctttgaagcttc 101970

>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence
          Length = 224295

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   cttatcaatgctctccagca 250
             ||||||||||||||||||||
Sbjct: 85434 cttatcaatgctctccagca 85415

>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aaacgcagggcctctccagg 213
              ||||||||||||||||||||
Sbjct: 239910 aaacgcagggcctctccagg 239891

>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete
               sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     cgagctgctctttcatcgtc 282
               ||||||||||||||||||||
Sbjct: 1102262 cgagctgctctttcatcgtc 1102281

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 341      gcggcaagacggggacggtggcgt 364
                |||||||||||| |||||||||||
Sbjct: 14935403 gcggcaagacggcgacggtggcgt 14935426

>dbj|AP006159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1157F01
          Length = 181639

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 341   gcggcaagacggggacggtggcgt 364
             |||||||||||| |||||||||||
Sbjct: 75573 gcggcaagacggcgacggtggcgt 75596

>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence
          Length = 157535

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    cttatcaatgctctccagca 250
              ||||||||||||||||||||
Sbjct: 138598 cttatcaatgctctccagca 138617

>dbj|AK073296.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029H14, full
           insert sequence
          Length = 948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 341 gcggcaagacggggacggtggcgt 364
           |||||||||||| |||||||||||
Sbjct: 110 gcggcaagacggcgacggtggcgt 133

>ref|NM_210463.1| Eremothecium gossypii AER252Cp (AER252C), mRNA
          Length = 4380

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  cgagctgctctttcatcgtc 282
            ||||||||||||||||||||
Sbjct: 3461 cgagctgctctttcatcgtc 3442


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,963,743
Number of Sequences: 3902068
Number of extensions: 2963743
Number of successful extensions: 54940
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54841
Number of HSP's gapped (non-prelim): 99
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)