Clone Name | rbart58c07 |
---|---|
Clone Library Name | barley_pub |
>UL52_EBV (P03193) Helicase/primase complex protein (Probable DNA replication| protein BSLF1) Length = 874 Score = 30.8 bits (68), Expect = 0.84 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -1 Query: 248 SKHVRTYVRRRTALAMHITHANVRTRMEHLLFFRWIGSP 132 ++H+RTY R T LA H+ ++ RME + W P Sbjct: 312 AEHMRTYFTRETYLAEHVRVQQLKIRMEPPAPYTWDPDP 350
>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)| (CDC-like kinase 1) Length = 484 Score = 28.9 bits (63), Expect = 3.2 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = -2 Query: 310 ENILSYCEFVVALPCQGSCTKVSTYVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLL 131 +N+ YCE S +V ++ T D C+ ++ + H +IC F+ GL Sbjct: 194 KNVDRYCE------AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 247 Query: 130 TVCVHFTRGFLAF 92 T GFL F Sbjct: 248 TYDFIKENGFLPF 260
>IFRD1_MOUSE (P19182) Interferon-related developmental regulator 1 (Nerve growth| factor-inducible protein PC4) (TPA-induced sequence 7) (TIS7 protein) Length = 449 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = +1 Query: 193 VICM-ASAVRRRTYVRTCLLLCSYLDTGERPQIHNNLKCF 309 +IC A++++ R TC +C ++ T + ++++ L+CF Sbjct: 174 IICDGAASIQARQTCATCFGVCCFIATDDITELYSTLECF 213
>SRA21_CAEEL (O18690) Serpentine receptor class alpha-21 (Protein sra-21)| Length = 339 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/65 (24%), Positives = 30/65 (46%) Frame = -2 Query: 238 YVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLTVCVHFTRGFLAFFFVVIKTCVIM 59 + Y A+ L + + T V + Y +G + VC+H+ R LA + + T + Sbjct: 145 HTHQYFIAVSLLVLQLLLTLVSFYIAYYGVHLAGYVPVCIHYPR--LAVHYSTVNTVRTV 202 Query: 58 IMLVC 44 +M+ C Sbjct: 203 VMVCC 207
>RNAS1_MICNV (Q9WUV3) Ribonuclease pancreatic precursor (EC 3.1.27.5) (RNase 1)| (RNase A) Length = 148 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = -2 Query: 265 QGSCTKVSTYVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLTVC 122 QG C V+T+V A+H C + T + + CY + +T C Sbjct: 61 QGYCKPVNTFVHEPQTAVHAVCSQKNVTCKNGNSNCYKSHSALHITDC 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,293,035 Number of Sequences: 219361 Number of extensions: 1098951 Number of successful extensions: 2392 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2319 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2387 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)