ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58c02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
2dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
3dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
4dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
5dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 1e-18
7emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536... 101 1e-18
8emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510... 101 1e-18
9gb|AY110462.1| Zea mays CL7112_1 mRNA sequence 48 0.018
10gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosom... 42 1.1
11gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, comple... 42 1.1
12gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.1
13gb|AE010355.1| Methanopyrus kandleri AV19 section 54 of 157 of t... 40 4.3
14ref|NM_197347.1| Oryza sativa (japonica cultivar-group) putative... 40 4.3
15ref|NM_182911.1| Homo sapiens testis specific, 10 (TSGA10), mRNA 40 4.3
16ref|XM_515644.1| PREDICTED: Pan troglodytes similar to TSGA10 is... 40 4.3
17ref|NM_025244.1| Homo sapiens testis specific, 10 (TSGA10), mRNA 40 4.3
18gb|BC028366.1| Homo sapiens testis specific, 10, mRNA (cDNA clon... 40 4.3
19gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 gen... 40 4.3
20gb|AC025824.37| Homo sapiens chromosome 15 clone RP11-430M3, com... 40 4.3
21gb|AC091580.11| Homo sapiens chromosome 15, clone RP11-304N14, c... 40 4.3
22gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, co... 40 4.3
23gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, com... 40 4.3
24dbj|AB169067.1| Macaca fascicularis testis cDNA, clone: QtsA-170... 40 4.3
25dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
26gb|AY014284.1| Homo sapiens nucleoporin NYD-SP7 mRNA, complete cds 40 4.3
27gb|AF254756.1|AF254756 Homo sapiens predicted testis protein (TS... 40 4.3
28dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 4.3
29gb|AC019097.5| Homo sapiens BAC clone RP11-425I16 from 2, comple... 40 4.3
30dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, ... 40 4.3
31emb|BX647157.1|HSM807301 Homo sapiens mRNA; cDNA DKFZp686K0536 (... 40 4.3
32emb|Y08849.1|MKMCHGENE M.kandleri mch gene 40 4.3
33dbj|AK106424.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.3
34dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.3
35dbj|AB066556.1| Macaca fascicularis mRNA, similar to human nucle... 40 4.3
36emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on ... 40 4.3
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.3
38dbj|AP000329.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 4.3
39dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 4.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                            
Query: 169      tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
                |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 19222153 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 19222212

                                                                            
Query: 229      gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
                ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 19222213 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 19222272

                                                   
Query: 289      cagcaccacgccccagaacgtgctcaccatcggca 323
                |||||| |  ||||| | ||||||||||| |||||
Sbjct: 19222273 cagcacgatcccccacaccgtgctcaccagcggca 19222307
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>dbj|AK109368.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D03, full
            insert sequence
          Length = 1826

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
            |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 1480 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1421

                                                                        
Query: 229  gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
            ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 1420 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1361

                                               
Query: 289  cagcaccacgccccagaacgtgctcaccatcggca 323
            |||||| |  ||||| | ||||||||||| |||||
Sbjct: 1360 cagcacgatcccccacaccgtgctcaccagcggca 1326
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>dbj|AK073310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F01, full
            insert sequence
          Length = 2721

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
            |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 2375 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 2316

                                                                        
Query: 229  gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
            ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 2315 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 2256

                                               
Query: 289  cagcaccacgccccagaacgtgctcaccatcggca 323
            |||||| |  ||||| | ||||||||||| |||||
Sbjct: 2255 cagcacgatcccccacaccgtgctcaccagcggca 2221
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>dbj|AK069916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038C16, full
            insert sequence
          Length = 2118

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
            |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 1492 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1433

                                                                        
Query: 229  gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
            ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 1432 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1373

                                               
Query: 289  cagcaccacgccccagaacgtgctcaccatcggca 323
            |||||| |  ||||| | ||||||||||| |||||
Sbjct: 1372 cagcacgatcccccacaccgtgctcaccagcggca 1338
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>dbj|AK061376.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-G07, full
            insert sequence
          Length = 1828

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
            |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 1480 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 1421

                                                                        
Query: 229  gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
            ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 1420 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 1361

                                               
Query: 289  cagcaccacgccccagaacgtgctcaccatcggca 323
            |||||| |  ||||| | ||||||||||| |||||
Sbjct: 1360 cagcacgatcccccacaccgtgctcaccagcggca 1326
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                            
Query: 169      tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
                |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 19148380 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 19148439

                                                                            
Query: 229      gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
                ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 19148440 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 19148499

                                                   
Query: 289      cagcaccacgccccagaacgtgctcaccatcggca 323
                |||||| |  ||||| | ||||||||||| |||||
Sbjct: 19148500 cagcacgatcccccacaccgtgctcaccagcggca 19148534
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>emb|AL731752.4|CNS08C81 Oryza sativa chromosome 12, . BAC OJ1536_D01 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 127026

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 169  tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
            |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 3792 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 3733

                                                                        
Query: 229  gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
            ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 3732 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 3673

                                               
Query: 289  cagcaccacgccccagaacgtgctcaccatcggca 323
            |||||| |  ||||| | ||||||||||| |||||
Sbjct: 3672 cagcacgatcccccacaccgtgctcaccagcggca 3638
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>emb|AL731751.4|CNS08C80 Oryza sativa chromosome 12, . BAC OJ1510_A06 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136155

 Score =  101 bits (51), Expect = 1e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                         
Query: 169   tcagagcggcttcctgtgcgcggaggaggccatgagcacggacatggggacgacaaacat 228
             |||||||||| ||| |||||| || || |||||||| | |  ||||| |||||| |||||
Sbjct: 55483 tcagagcggcctccggtgcgccgacgacgccatgaggatgaccatggcgacgacgaacat 55542

                                                                         
Query: 229   gaagagcatgctccccagcagcgtggacgtcctcctcgacgacctccggtactccccgaa 288
             ||| |||||||||||||| || ||| | |||| || |||||| ||||||||||| |||||
Sbjct: 55543 gaacagcatgctccccaggagagtgtaagtccgccgcgacgatctccggtactcgccgaa 55602

                                                
Query: 289   cagcaccacgccccagaacgtgctcaccatcggca 323
             |||||| |  ||||| | ||||||||||| |||||
Sbjct: 55603 cagcacgatcccccacaccgtgctcaccagcggca 55637
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>gb|AY110462.1| Zea mays CL7112_1 mRNA sequence
          Length = 752

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 265 cgacgacctccggtactccccgaacagcaccacgccccagaacgtgct 312
           ||||||| | |||||||||||||| ||||  ||||||||||| |||||
Sbjct: 707 cgacgacttgcggtactccccgaagagcagtacgccccagaaggtgct 660
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>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence
          Length = 184296

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     aagaacttgctagcctctctg 113
              |||||||||||||||||||||
Sbjct: 111832 aagaacttgctagcctctctg 111852
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>gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, complete sequence
          Length = 157262

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    aagaacttgctagcctctctg 113
             |||||||||||||||||||||
Sbjct: 43024 aagaacttgctagcctctctg 43044
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 286     gaacagcaccacgccccagaacgtg 310
               |||||||| ||||||||||||||||
Sbjct: 2417327 gaacagcatcacgccccagaacgtg 2417303
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>gb|AE010355.1| Methanopyrus kandleri AV19 section 54 of 157 of the complete genome
          Length = 11133

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 260   ctcctcgacgacctccggta 279
             ||||||||||||||||||||
Sbjct: 10868 ctcctcgacgacctccggta 10849
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>ref|NM_197347.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450
            (OSJNBa0026L12.2), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 250  cgtggacgtcctcctcgacgacctccgg 277
            |||||||||||||||||  |||||||||
Sbjct: 1084 cgtggacgtcctcctcggtgacctccgg 1057
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>ref|NM_182911.1| Homo sapiens testis specific, 10 (TSGA10), mRNA
          Length = 3050

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2649 ccagaacgtgctcaccatcg 2668
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>ref|XM_515644.1| PREDICTED: Pan troglodytes similar to TSGA10 isoform (LOC459436),
            mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 1948 ccagaacgtgctcaccatcg 1967
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>ref|NM_025244.1| Homo sapiens testis specific, 10 (TSGA10), mRNA
          Length = 3044

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2644 ccagaacgtgctcaccatcg 2663
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>gb|BC028366.1| Homo sapiens testis specific, 10, mRNA (cDNA clone MGC:26905
            IMAGE:4830604), complete cds
          Length = 3050

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2649 ccagaacgtgctcaccatcg 2668
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>gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L12 genomic sequence, complete
             sequence
          Length = 152172

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 250   cgtggacgtcctcctcgacgacctccgg 277
             |||||||||||||||||  |||||||||
Sbjct: 12995 cgtggacgtcctcctcggtgacctccgg 13022
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>gb|AC025824.37| Homo sapiens chromosome 15 clone RP11-430M3, complete sequence
          Length = 177917

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   aacagcaccacgccccagaa 306
             ||||||||||||||||||||
Sbjct: 61340 aacagcaccacgccccagaa 61359
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>gb|AC091580.11| Homo sapiens chromosome 15, clone RP11-304N14, complete sequence
          Length = 108369

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    aacagcaccacgccccagaa 306
              ||||||||||||||||||||
Sbjct: 106469 aacagcaccacgccccagaa 106488
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>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence
          Length = 187350

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tgaagagcatgctccccagc 247
              ||||||||||||||||||||
Sbjct: 163830 tgaagagcatgctccccagc 163849
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>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence
          Length = 210074

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgaagagcatgctccccagc 247
             ||||||||||||||||||||
Sbjct: 29594 tgaagagcatgctccccagc 29613
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>dbj|AB169067.1| Macaca fascicularis testis cDNA, clone: QtsA-17006, similar to human
            testis specific, 10 (TSGA10), mRNA, RefSeq: NM_025244.1
          Length = 2807

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2395 ccagaacgtgctcaccatcg 2414
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 250      cgtggacgtcctcctcgacgacctccgg 277
                |||||||||||||||||  |||||||||
Sbjct: 19363386 cgtggacgtcctcctcggtgacctccgg 19363359
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>gb|AY014284.1| Homo sapiens nucleoporin NYD-SP7 mRNA, complete cds
          Length = 3534

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2497 ccagaacgtgctcaccatcg 2516
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>gb|AF254756.1|AF254756 Homo sapiens predicted testis protein (TSGA10) mRNA, complete cds
          Length = 3044

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2644 ccagaacgtgctcaccatcg 2663
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>dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 26/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgaagagcatgctccccagc 247
             ||||||||||||||||||||
Sbjct: 69645 tgaagagcatgctccccagc 69664
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>gb|AC019097.5| Homo sapiens BAC clone RP11-425I16 from 2, complete sequence
          Length = 186023

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    ccagaacgtgctcaccatcg 320
              ||||||||||||||||||||
Sbjct: 110898 ccagaacgtgctcaccatcg 110917
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>dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, map 22, complete
              sequences
          Length = 155412

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tgaagagcatgctccccagc 247
              ||||||||||||||||||||
Sbjct: 117844 tgaagagcatgctccccagc 117863
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>emb|BX647157.1|HSM807301 Homo sapiens mRNA; cDNA DKFZp686K0536 (from clone DKFZp686K0536)
          Length = 3353

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 2862 ccagaacgtgctcaccatcg 2881
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>emb|Y08849.1|MKMCHGENE M.kandleri mch gene
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 260  ctcctcgacgacctccggta 279
            ||||||||||||||||||||
Sbjct: 1003 ctcctcgacgacctccggta 984
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>dbj|AK106424.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B07, full
            insert sequence
          Length = 1878

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 250  cgtggacgtcctcctcgacgacctccgg 277
            |||||||||||||||||  |||||||||
Sbjct: 1168 cgtggacgtcctcctcggtgacctccgg 1141
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>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tgaagagcatgctccccagc 247
              ||||||||||||||||||||
Sbjct: 251854 tgaagagcatgctccccagc 251873
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>dbj|AB066556.1| Macaca fascicularis mRNA, similar to human nucleoporin NYD-SP7,
            complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  ccagaacgtgctcaccatcg 320
            ||||||||||||||||||||
Sbjct: 1900 ccagaacgtgctcaccatcg 1919
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>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3'
             part of the gene for calcium channel, voltage-dependent, L
             type, alpha 2D subunit (KIAA0558) and the first exon of
             the gene for PL6 protein (deleted in Small Cell Lung
             Carcinoma). Contains ESTs, GSSs and a putative CpG island,
             complete sequence
          Length = 27844

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   aggaggccatgagcacggac 211
             ||||||||||||||||||||
Sbjct: 26970 aggaggccatgagcacggac 26951
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 250      cgtggacgtcctcctcgacgacctccgg 277
                |||||||||||||||||  |||||||||
Sbjct: 19374662 cgtggacgtcctcctcggtgacctccgg 19374635
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>dbj|AP000329.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
            clone:Q92D1, complete sequence
          Length = 10909

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 228  tgaagagcatgctccccagc 247
            ||||||||||||||||||||
Sbjct: 8035 tgaagagcatgctccccagc 8054
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>dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 6/9, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tgaagagcatgctccccagc 247
             ||||||||||||||||||||
Sbjct: 61613 tgaagagcatgctccccagc 61632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,780,989
Number of Sequences: 3902068
Number of extensions: 1780989
Number of successful extensions: 29755
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29631
Number of HSP's gapped (non-prelim): 124
length of query: 324
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 302
effective length of database: 17,147,199,772
effective search space: 5178454331144
effective search space used: 5178454331144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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