ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart58b07 |
|---|---|
| Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 65.5 bits (158), Expect = 5e-11 Identities = 30/41 (73%), Positives = 35/41 (85%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGLAVDSPTVSSL 292 GN AAFLVSPLAS ITG+T+YVDNGLN+MG+A+DSP L Sbjct: 343 GNAAAFLVSPLASAITGATIYVDNGLNSMGVALDSPVFKDL 383
>FABI_SYNY3 (P73016) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 258 Score = 41.6 bits (96), Expect = 7e-04 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GNTAAFL S L+S ITG +YVD+G MG+ Sbjct: 228 GNTAAFLASDLSSGITGQIIYVDSGYEIMGM 258
>FABI_ANASP (Q05069) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 258 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GNTAAFL S LAS ITG +YVD G MG+ Sbjct: 228 GNTAAFLASDLASGITGQVLYVDAGYEIMGM 258
>FABI1_RHIME (P58380) Enoyl-[acyl-carrier-protein] reductase [NADH] 1 (EC| 1.3.1.9) (NADH-dependent enoyl-ACP reductase 1) Length = 272 Score = 41.2 bits (95), Expect = 0.001 Identities = 20/42 (47%), Positives = 32/42 (76%), Gaps = 1/42 (2%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL-AVDSPTVSSL 292 GN+A +L+S L+S +TG +VD+G +T+G+ AVD+P +S L Sbjct: 229 GNSALYLLSDLSSGVTGEVHHVDSGYHTVGMKAVDAPDISVL 270
>FABI_BUCAI (P57353) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 260 Score = 38.9 bits (89), Expect = 0.005 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GN A+FL+S L+ ITGS +YVDNG N + Sbjct: 226 GNVASFLLSDLSLGITGSVIYVDNGFNVSSM 256
>FABI_BUCBP (Q89AM1) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 260 Score = 37.7 bits (86), Expect = 0.011 Identities = 17/32 (53%), Positives = 21/32 (65%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGLA 319 GNTAAFL S L+ ITG +YVD G N ++ Sbjct: 226 GNTAAFLCSDLSKGITGQIIYVDGGFNITAMS 257
>FABI_AQUAE (O67505) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 270 Score = 36.6 bits (83), Expect = 0.023 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 G+TA FL S A ITG V+VDNG + MG+ Sbjct: 226 GDTAVFLCSDWARAITGEVVHVDNGYHIMGV 256
>FABI_PSEAE (Q9ZFE4) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 265 Score = 36.6 bits (83), Expect = 0.023 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GN AFL S LAS I+G +YVD G NT + Sbjct: 229 GNAGAFLCSDLASGISGEILYVDGGFNTTAM 259
>FABI_BUCAP (Q8K9Q6) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 260 Score = 35.0 bits (79), Expect = 0.068 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GN AAFL S L+ ITGS + VD+G N G+ Sbjct: 226 GNVAAFLCSDLSIGITGSIINVDHGFNLNGI 256
>FABI_HAEIN (P44432) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 34.3 bits (77), Expect = 0.12 Identities = 17/27 (62%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 GN+AAFL S LAS ITG V+VD G + Sbjct: 225 GNSAAFLCSDLASGITGEIVHVDAGFS 251
>TRNH1_ARATH (Q9ASX2) Putative tropinone reductase homolog At1g07440 (EC| 1.1.1.-) Length = 266 Score = 32.0 bits (71), Expect = 0.58 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -1 Query: 402 AFLVSPLASVITGSTVYVDNGLNTMGLA 319 AFL P AS ITG T+ VD GL G + Sbjct: 234 AFLCMPAASYITGQTICVDGGLTVNGFS 261
>FABI_SHIFL (P0AEK6) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 31.6 bits (70), Expect = 0.76 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 GN+AAFL S L++ I+G V+VD G + Sbjct: 225 GNSAAFLCSDLSAGISGEVVHVDGGFS 251
>FABI_SALTY (P16657) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 31.6 bits (70), Expect = 0.76 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 GN+AAFL S L++ I+G V+VD G + Sbjct: 225 GNSAAFLCSDLSAGISGEVVHVDGGFS 251
>FABI_ECOLI (P0AEK4) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 31.6 bits (70), Expect = 0.76 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 GN+AAFL S L++ I+G V+VD G + Sbjct: 225 GNSAAFLCSDLSAGISGEVVHVDGGFS 251
>FABI_ECO57 (P0AEK5) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 31.6 bits (70), Expect = 0.76 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 GN+AAFL S L++ I+G V+VD G + Sbjct: 225 GNSAAFLCSDLSAGISGEVVHVDGGFS 251
>TRN2_DATST (P50163) Tropinone reductase 2 (EC 1.1.1.236) (Tropinone| reductase-II) (TR-II) Length = 260 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -1 Query: 402 AFLVSPLASVITGSTVYVDNGL 337 AFL P AS +TG +YVD GL Sbjct: 233 AFLCFPAASYVTGQIIYVDGGL 254
>FABG_STAAW (P0A0I0) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAAS (Q6G9Y2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAAR (Q6GHK4) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAAN (P99093) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAAM (P0A0H9) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAAC (Q5HGK2) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 246 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 220 NTVAFLASDKAKYITGQTIHVNGGM 244
>FABG_STAES (Q8CPI3) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 218 NTVAFLASDKAKYITGQTIHVNGGM 242
>FABG_STAEQ (Q5HPW0) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 NT AFL S A ITG T++V+ G+ Sbjct: 218 NTVAFLASDKAKYITGQTIHVNGGM 242
>FABI_BACSU (P54616) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) (Cold shock-induced protein 15) (CSI15) (Vegetative protein 241) (VEG241) Length = 258 Score = 30.4 bits (67), Expect = 1.7 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 G+TAAFL S ++ ITG ++VD+G + Sbjct: 228 GDTAAFLFSDMSRGITGENLHVDSGFH 254
>FABI_RICCN (Q92IC6) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 260 Score = 30.0 bits (66), Expect = 2.2 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMG 325 G A +L S L+ +TG YVD G N MG Sbjct: 227 GGAAVYLFSELSKGVTGEIHYVDCGYNIMG 256
>DHG2_BACSU (P80869) Glucose 1-dehydrogenase 2 (EC 1.1.1.47) (GLCDH-II)| (GDH-II) (General stress protein 74) (GSP74) Length = 258 Score = 30.0 bits (66), Expect = 2.2 Identities = 13/23 (56%), Positives = 19/23 (82%) Frame = -1 Query: 405 AAFLVSPLASVITGSTVYVDNGL 337 AA+LVS AS +TG+T++VD G+ Sbjct: 228 AAWLVSEEASYVTGATLFVDGGM 250
>TRN2_HYONI (P50164) Tropinone reductase 2 (EC 1.1.1.236) (Tropinone| reductase-II) (TR-II) Length = 260 Score = 29.6 bits (65), Expect = 2.9 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = -1 Query: 402 AFLVSPLASVITGSTVYVDNGLNTMG 325 AFL P AS +TG +YVD G G Sbjct: 233 AFLCFPAASYVTGQIIYVDGGFMANG 258
>FABI2_RHIME (P58381) Enoyl-[acyl-carrier-protein] reductase [NADH] 2 (EC| 1.3.1.9) (NADH-dependent enoyl-ACP reductase 2) Length = 268 Score = 29.6 bits (65), Expect = 2.9 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGLAVDSPTVSSL 292 G++A +L+S L+ +TG YVD+G N + PT+ +L Sbjct: 226 GSSALYLLSDLSRGVTGEIHYVDSGYNITSM----PTLEAL 262
>FABI_HELPY (O24990) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 275 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GN +L+S L+S ++G +VD G + MG+ Sbjct: 225 GNAGMYLLSSLSSGVSGEVHFVDAGYHVMGM 255
>NODG_AZOBR (P17611) Nodulation protein G| Length = 246 Score = 29.3 bits (64), Expect = 3.7 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLN 334 G ++L S +A +TGST+ ++ GLN Sbjct: 218 GGAVSYLASEIAGYVTGSTLNINGGLN 244
>PYRH_CHLTR (O84685) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 4.9 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +1 Query: 40 LLRRQSATLNTVSATTTFEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 192 L + QS +N VSA +ATL G L + + S SCPQL Sbjct: 62 LSQSQSLQINRVSADQMGMLATLINGMALADALKTEDVPNLLTSTLSCPQL 112
>DHMA_FLAS1 (P22441) N-acylmannosamine 1-dehydrogenase (EC 1.1.1.233) (NAM-DH)| Length = 270 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 405 AAFLVSPLASVITGSTVYVDNGLNTM 328 A FL +S ITGST+ +D GL+ M Sbjct: 235 AVFLAEDGSSFITGSTITIDGGLSAM 260
>FABG_VIBCH (Q9KQH7) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 244 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 + AFL SP A+ ITG T++V+ G+ Sbjct: 217 SAVAFLASPEAAYITGETLHVNGGM 241
>FABI_RICPR (Q9ZDG4) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 261 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMG 325 G A +L S L+ +TG YVD G N +G Sbjct: 227 GGAAVYLFSELSKGVTGEIHYVDCGYNIIG 256
>DHG2_BACME (P39483) Glucose 1-dehydrogenase 2 (EC 1.1.1.47) (GLCDH-II)| Length = 261 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 + AAFL S AS +TG T++ D G+ Sbjct: 226 SVAAFLASSQASYVTGITLFADGGM 250
>FABI_HELPJ (Q9ZMN7) Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9)| (NADH-dependent enoyl-ACP reductase) Length = 275 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = -1 Query: 414 GNTAAFLVSPLASVITGSTVYVDNGLNTMGL 322 GN +L+S L++ ++G +VD G + MG+ Sbjct: 225 GNAGMYLLSSLSNGVSGEVHFVDAGYHVMGM 255
>PECR_PONPY (Q5RCH8) Peroxisomal trans-2-enoyl-CoA reductase (EC 1.3.1.38)| Length = 303 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNG 340 + FL+SP AS ITG +V VD G Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGG 264
>PECR_HUMAN (Q9BY49) Peroxisomal trans-2-enoyl-CoA reductase (EC 1.3.1.38)| (TERP) (HPDHase) (pVI-ARL) (2,4-dienoyl-CoA reductase-related protein) (DCR-RP) Length = 303 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNG 340 + FL+SP AS ITG +V VD G Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGG 264
>DHGA_BACME (P10528) Glucose 1-dehydrogenase A (EC 1.1.1.47)| Length = 261 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 405 AAFLVSPLASVITGSTVYVDNGL 337 AAFL S AS +TG T++ D G+ Sbjct: 228 AAFLASSQASYVTGITLFADGGM 250
>DHG4_BACME (P39485) Glucose 1-dehydrogenase 4 (EC 1.1.1.47) (GLCDH-IV)| Length = 261 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 405 AAFLVSPLASVITGSTVYVDNGL 337 AAFL S AS +TG T++ D G+ Sbjct: 228 AAFLASSQASYVTGITLFADGGM 250
>DHG3_BACME (P39484) Glucose 1-dehydrogenase 3 (EC 1.1.1.47) (GLCDH-III)| Length = 261 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -1 Query: 405 AAFLVSPLASVITGSTVYVDNGL 337 AAFL S AS +TG T++ D G+ Sbjct: 228 AAFLASSQASYVTGITLFADGGM 250
>DRL42_ARATH (Q9FKZ1) Probable disease resistance protein At5g66900| Length = 809 Score = 28.1 bits (61), Expect = 8.3 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -2 Query: 170 EGMAVEIDLLSSPAPPLWPICNVAISNVVVADTVFSVADWRLNKL 36 +G++ +DLLS PAP +C+V D V DW L +L Sbjct: 139 DGLSKRMDLLSVPAPVFRDLCSVP-----KLDKVIVGLDWPLGEL 178
>FABG_AQUAE (O67610) 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100)| (3-ketoacyl-acyl carrier protein reductase) Length = 248 Score = 28.1 bits (61), Expect = 8.3 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 411 NTAAFLVSPLASVITGSTVYVDNGL 337 N FL S LAS ITG ++V+ G+ Sbjct: 223 NVVLFLCSELASYITGEVIHVNGGM 247
>MOAE_KLEAE (P54795) Protein moaE| Length = 257 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -1 Query: 399 FLVSPLASVITGSTVYVDNGLNTMGLAVDSPTVS 298 FL SP A++I+G+T+ D G + VD PT++ Sbjct: 226 FLCSPQAAIISGATLVADGGAS----IVDVPTLA 255 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,378,328 Number of Sequences: 219361 Number of extensions: 902662 Number of successful extensions: 2298 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 2211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2297 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
