ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart58b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_481639.1| Oryza sativa (japonica cultivar-group), mRNA 117 3e-23
2gb|DQ083199.1| Oryza sativa (indica cultivar-group) clone 5S11F1... 117 3e-23
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
4dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
5dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic D... 117 3e-23
6dbj|AK070992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 3e-23
7emb|AJ003025.1|OSENOYLAC Oryza sativa mRNA for enoyl-ACP reductase 101 2e-18
8gb|AY106087.1| Zea mays PCO109463 mRNA sequence 100 7e-18
9gb|BT016571.1| Zea mays clone Contig404 mRNA sequence 78 3e-11
10gb|AY112451.1| Zea mays CL3046_1 mRNA sequence 78 3e-11
11gb|AC115291.7| Mus musculus BAC clone RP23-65P2 from 15, complet... 46 0.090
12gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, compl... 46 0.090
13gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, comp... 46 0.090
14gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400... 44 0.36
15emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1... 44 0.36
16dbj|AB009777.1| Homo sapiens gene for osteonidogen, promoter region 44 0.36
17gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, comp... 42 1.4
18emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chr... 42 1.4
19emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chr... 42 1.4
20gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, com... 42 1.4
21gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, comple... 42 1.4
22gb|AF374539.1|AF374539 Thalassiosira pseudonana isolate CCMP 133... 42 1.4
23gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chrom... 42 1.4
24gb|AC005386.1|AC005386 citb_57_l_21, complete sequence 42 1.4
25gb|L81766.1|HSL81766 Homo sapiens (subclone 9_d11 from P1 H18) D... 42 1.4
26gb|L05072.1|HUMIFNRF1A Homo sapiens interferon regulatory factor... 42 1.4
27ref|NM_187851.1| Oryza sativa (japonica cultivar-group), Ozsa829... 40 5.5
28gb|DQ121061.1| Hucho taimen clone ZA-56 microsatellite sequence 40 5.5
29emb|AL935259.1| Lactobacillus plantarum strain WCFS1 complete ge... 40 5.5
30emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, c... 40 5.5
31gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone ... 40 5.5
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
33gb|AC011754.8| Homo sapiens BAC clone RP11-546P22 from 2, comple... 40 5.5
34gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, com... 40 5.5
35dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
36emb|BX649333.9| Zebrafish DNA sequence from clone DKEY-200F3 in ... 40 5.5
37ref|XM_308264.2| Anopheles gambiae str. PEST ENSANGP00000010835 ... 40 5.5
38emb|AJ330610.1|HSA330610 Homo sapiens genomic sequence surroundi... 40 5.5
39emb|BX000462.10| Zebrafish DNA sequence from clone DKEY-114F6 in... 40 5.5
40dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.5 
>ref|XM_481639.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1647

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252

                                                           
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
            |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 1205



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 212  tactaactaactaagctctttattcaa 238
            ||||| |||||||||||||||||||||
Sbjct: 1404 tactacctaactaagctctttattcaa 1378
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>gb|DQ083199.1| Oryza sativa (indica cultivar-group) clone 5S11F12 mRNA sequence
          Length = 443

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                       
Query: 308 gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
           ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 270 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 211

                                                          
Query: 368 gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
           |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 210 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 164



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 212 tactaactaactaagctctttattcaa 238
           ||||| |||||||||||||||||||||
Sbjct: 363 tactacctaactaagctctttattcaa 337
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                            
Query: 308      gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
                ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 14411413 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 14411354

                                                               
Query: 368      gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
                |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 14411353 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 14411307



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 212      tactaactaactaagctctttattcaa 238
                ||||| |||||||||||||||||||||
Sbjct: 14411506 tactacctaactaagctctttattcaa 14411480
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>dbj|AP005490.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBa0049I01
          Length = 140261

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 6281 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 6222

                                                           
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
            |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 6221 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 6175



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 212  tactaactaactaagctctttattcaa 238
            ||||| |||||||||||||||||||||
Sbjct: 6374 tactacctaactaagctctttattcaa 6348
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>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0670E08
          Length = 133106

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                         
Query: 308   gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
             ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 55696 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 55637

                                                            
Query: 368   gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
             |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 55636 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 55590



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 212   tactaactaactaagctctttattcaa 238
             ||||| |||||||||||||||||||||
Sbjct: 55789 tactacctaactaagctctttattcaa 55763
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>dbj|AK070992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077K10, full
            insert sequence
          Length = 1647

 Score =  117 bits (59), Expect = 3e-23
 Identities = 95/107 (88%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            ||||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 1311 gggctgtcaactgcaagccccattgtattgagtccattgtcaacgtaaacagtcgagcca 1252

                                                           
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
            |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 1251 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 1205



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 212  tactaactaactaagctctttattcaa 238
            ||||| |||||||||||||||||||||
Sbjct: 1404 tactacctaactaagctctttattcaa 1378
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>emb|AJ003025.1|OSENOYLAC Oryza sativa mRNA for enoyl-ACP reductase
          Length = 1520

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            ||||||||||||||||| ||||| || || ||||||||||  ||||| ||||||||||||
Sbjct: 1148 gggctgtcaactgcaagccccattgtattgagtccattgtgaacgtacacagtcgagcca 1089

                                                           
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
            |||||  | |||||||| ||||||||||| |||||||| || |||||
Sbjct: 1088 gtgatagcggaagccaatggagacaccaggaatgctgctgtgttccc 1042
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>gb|AY106087.1| Zea mays PCO109463 mRNA sequence
          Length = 1496

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                        
Query: 305  gtggggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgag 364
            ||||||||||||| |||||| ||||| ||||| || |||||||| ||||||| ||| || 
Sbjct: 1223 gtggggctgtcaagtgcaagtcccattgtgttgagcccattgtcaacgtaaatagttgaa 1164

                                                              
Query: 365  ccagtgatgacagaagccaaaggagacaccagaaatgctgccgtattccc 414
            ||||||||  | || ||||||||||||||||| ||||||||||| |||||
Sbjct: 1163 ccagtgattgctgatgccaaaggagacaccaggaatgctgccgtgttccc 1114
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>gb|BT016571.1| Zea mays clone Contig404 mRNA sequence
          Length = 1517

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| 
Sbjct: 1178 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1119

                                               
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgc 402
            |||||| |||||||||| | ||| ||||| |||||
Sbjct: 1118 gtgatggcagaagccaatgaagaaaccaggaatgc 1084
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>gb|AY112451.1| Zea mays CL3046_1 mRNA sequence
          Length = 1482

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 308  gggctgtcaactgcaagacccatggtgttaagtccattgtcgacgtaaacagtcgagcca 367
            |||||||||| |||||| ||||| || || || |||||||| || |||||||||||||| 
Sbjct: 1174 gggctgtcaattgcaagccccattgtattgagcccattgtcaacataaacagtcgagccg 1115

                                               
Query: 368  gtgatgacagaagccaaaggagacaccagaaatgc 402
            |||||| |||||||||| | ||| ||||| |||||
Sbjct: 1114 gtgatggcagaagccaatgaagaaaccaggaatgc 1080
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>gb|AC115291.7| Mus musculus BAC clone RP23-65P2 from 15, complete sequence
          Length = 237119

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 362    gagccagtgatgacagaagccaaagga 388
              ||||||||||||| |||||||||||||
Sbjct: 102488 gagccagtgatgagagaagccaaagga 102462
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>gb|AC105749.2| Homo sapiens chromosome 3 clone RP11-640L9, complete sequence
          Length = 200450

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 158    cagccatcccctcttttttctcctgcc 184
              ||||| |||||||||||||||||||||
Sbjct: 178821 cagccttcccctcttttttctcctgcc 178847
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>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence
          Length = 166349

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 158    cagccatcccctcttttttctcctgcc 184
              ||||| |||||||||||||||||||||
Sbjct: 121280 cagccttcccctcttttttctcctgcc 121306
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>gb|AC025056.5|AC025056 Homo sapiens chromosome 8, clone RP11-400G5, complete sequence
          Length = 166222

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 227   ctctttattcaacacaatcaag 248
             ||||||||||||||||||||||
Sbjct: 88371 ctctttattcaacacaatcaag 88350
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>emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1033H12 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214175

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 155   caacagccatcccctctttttt 176
             ||||||||||||||||||||||
Sbjct: 81157 caacagccatcccctctttttt 81178
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>dbj|AB009777.1| Homo sapiens gene for osteonidogen, promoter region
          Length = 5332

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 155 caacagccatcccctctttttt 176
           ||||||||||||||||||||||
Sbjct: 510 caacagccatcccctctttttt 489
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>gb|AC157562.8| Mus musculus chromosome 1, clone RP24-304A3, complete sequence
          Length = 120189

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    acagtatcagcaacaacaaca 90
             |||||||||||||||||||||
Sbjct: 53372 acagtatcagcaacaacaaca 53352
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>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a
             novel gene, complete sequence
          Length = 183342

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 70    acagtatcagcaacaacaaca 90
             |||||||||||||||||||||
Sbjct: 48741 acagtatcagcaacaacaaca 48721
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>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43
             Contains a novel gene, a ribosomal protein S24 (RPS24)
             pseudogene, the COG2 gene for component of oligomeric
             golgi complex 2, the 3' end of the AGT gene for
             angiotensinogen (serine (or cysteine) proteinase
             inhibitor,clade A (alpha-1 antiproteinase, antitrypsin),
             member 8) and a CpG island, complete sequence
          Length = 181175

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   ttttctcctgccctcagctct 193
             |||||||||||||||||||||
Sbjct: 70400 ttttctcctgccctcagctct 70380
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>gb|AC079320.9| Homo sapiens chromosome 5, clone RP11-729C24, complete sequence
          Length = 160042

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   cctcttttttctcctgccctc 187
             |||||||||||||||||||||
Sbjct: 33748 cctcttttttctcctgccctc 33728
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>gb|AC116366.2| Homo sapiens chromosome 5 clone RP11-89G4, complete sequence
          Length = 169385

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   cctcttttttctcctgccctc 187
             |||||||||||||||||||||
Sbjct: 98711 cctcttttttctcctgccctc 98691
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>gb|AF374539.1|AF374539 Thalassiosira pseudonana isolate CCMP 1335 clone 1-4 sexually
           induced protein SIG 1 gene, partial cds
          Length = 654

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 acagtcgagccagtgatgaca 376
           |||||||||||||||||||||
Sbjct: 257 acagtcgagccagtgatgaca 237
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>gb|AC156804.2| Pan troglodytes BAC clone CH251-371A18 from chromosome unknown,
             complete sequence
          Length = 232130

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   cctcttttttctcctgccctc 187
             |||||||||||||||||||||
Sbjct: 95165 cctcttttttctcctgccctc 95145
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>gb|AC005386.1|AC005386 citb_57_l_21, complete sequence
          Length = 196361

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 173    ttttctcctgccctcagctct 193
              |||||||||||||||||||||
Sbjct: 163508 ttttctcctgccctcagctct 163488
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>gb|L81766.1|HSL81766 Homo sapiens (subclone 9_d11 from P1 H18) DNA sequence, complete
            sequence
          Length = 4220

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  cctcttttttctcctgccctc 187
            |||||||||||||||||||||
Sbjct: 3882 cctcttttttctcctgccctc 3902
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>gb|L05072.1|HUMIFNRF1A Homo sapiens interferon regulatory factor 1 gene, complete cds
          Length = 7721

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 167  cctcttttttctcctgccctc 187
            |||||||||||||||||||||
Sbjct: 3606 cctcttttttctcctgccctc 3626
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>ref|NM_187851.1| Oryza sativa (japonica cultivar-group), Ozsa8295 predicted mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   gtatcagcaacaacaacatt 92
            ||||||||||||||||||||
Sbjct: 1748 gtatcagcaacaacaacatt 1729
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>gb|DQ121061.1| Hucho taimen clone ZA-56 microsatellite sequence
          Length = 726

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  cagtatcagcaacaacaaca 90
           ||||||||||||||||||||
Sbjct: 498 cagtatcagcaacaacaaca 517
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>emb|AL935259.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 8/11
          Length = 254050

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 390    acaccagaaatgctgccgta 409
              ||||||||||||||||||||
Sbjct: 129282 acaccagaaatgctgccgta 129301
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>emb|AL031744.8|PFMAL1P1 Plasmodium falciparum DNA from MAL1P1, complete sequence
          Length = 124330

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   ccatcccctcttttttctcc 180
             ||||||||||||||||||||
Sbjct: 13448 ccatcccctcttttttctcc 13429
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>gb|AC087772.5|AC087772 Genomic Sequence for Mus musculus, clone RP23-326L17, complete sequence
          Length = 218905

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tgggccaaagaggtggtgct 132
              ||||||||||||||||||||
Sbjct: 108792 tgggccaaagaggtggtgct 108811
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      gtatcagcaacaacaacatt 92
               ||||||||||||||||||||
Sbjct: 8268088 gtatcagcaacaacaacatt 8268069
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>gb|AC011754.8| Homo sapiens BAC clone RP11-546P22 from 2, complete sequence
          Length = 141704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     tctgatgtatatataacacagttt 41
              |||||| |||||||||||||||||
Sbjct: 130824 tctgatatatatataacacagttt 130847
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>gb|AC020968.3| Mus musculus chromosome 18 clone RP23-193O23, complete sequence
          Length = 199704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tgggccaaagaggtggtgct 132
             ||||||||||||||||||||
Sbjct: 54397 tgggccaaagaggtggtgct 54416
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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0434D08
          Length = 161266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gtatcagcaacaacaacatt 92
             ||||||||||||||||||||
Sbjct: 62019 gtatcagcaacaacaacatt 62000
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>emb|BX649333.9| Zebrafish DNA sequence from clone DKEY-200F3 in linkage group 4,
             complete sequence
          Length = 273859

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   ccatcccctcttttttctcc 180
             ||||||||||||||||||||
Sbjct: 48803 ccatcccctcttttttctcc 48822
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>ref|XM_308264.2| Anopheles gambiae str. PEST ENSANGP00000010835
           (ENSANGG00000008346), partial mRNA
          Length = 381

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  atcagcaacaacaacattcg 94
           ||||||||||||||||||||
Sbjct: 269 atcagcaacaacaacattcg 288
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>emb|AJ330610.1|HSA330610 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ4P-E15RS
          Length = 676

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 108 acaaatgggccaaagaggtggtgc 131
           |||||||||||||||| |||||||
Sbjct: 524 acaaatgggccaaagaagtggtgc 501
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>emb|BX000462.10| Zebrafish DNA sequence from clone DKEY-114F6 in linkage group 1, complete
              sequence
          Length = 167671

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    ccatcccctcttttttctcc 180
              ||||||||||||||||||||
Sbjct: 117201 ccatcccctcttttttctcc 117182
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>dbj|AP004250.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47K21, TM0260,
             complete sequence
          Length = 79947

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    cagtatcagcaacaacaaca 90
             ||||||||||||||||||||
Sbjct: 74546 cagtatcagcaacaacaaca 74527


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,676,312
Number of Sequences: 3902068
Number of extensions: 4676312
Number of successful extensions: 97322
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97200
Number of HSP's gapped (non-prelim): 122
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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