ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart58b03 |
|---|---|
| Clone Library Name | barley_pub |
>FOGT1_ARATH (Q9ZQ95) Flavonol-3-O-glycoside-7-O-glucosyltransferase 1 (EC| 2.4.1.-) Length = 495 Score = 33.9 bits (76), Expect = 0.095 Identities = 19/70 (27%), Positives = 33/70 (47%) Frame = -2 Query: 408 KEAEGVQVTSREVEKAVAEMMGDGPEGSXXXXXXXXXXXXXXXXXXESGSSHSDLTDMIR 229 +E GV V V+KAV E+MG+ + E GSSHS++T +++ Sbjct: 426 EEKIGVLVDKEGVKKAVEELMGESDDAKERRRRAKELGESAHKAVEEGGSSHSNITFLLQ 485 Query: 228 YVTDLSKQRS 199 + L++ + Sbjct: 486 DIMQLAQSNN 495
>COGT1_ARATH (Q9ZQ99) Cytokinin-O-glucosyltransferase 1 (EC 2.4.1.-) (Zeatin| O-glucosyltransferase 1) (AtZOG1) Length = 491 Score = 33.9 bits (76), Expect = 0.095 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = -2 Query: 408 KEAEGVQVTSREVEKAVAEMMGDGPEGSXXXXXXXXXXXXXXXXXXESGSSHSDLTDMIR 229 +E GV V V+KAV E+MGD + E GSSHS++T +++ Sbjct: 422 EEKIGVLVDKEGVKKAVEELMGDSNDAKERRKRVKELGELAHKAVEEGGSSHSNITFLLQ 481 Query: 228 YVTDLSKQR 202 + L + + Sbjct: 482 DIMQLEQPK 490
>COGT3_ARATH (Q9ZQ94) Cytokinin-O-glucosyltransferase 3 (EC 2.4.1.-)| (UDP-glycosyltransferase 73C5) (Deoxynivalenol-glucosyl-transferase) (Zeatin O-glucosyltransferase 3) (AtZOG3) Length = 495 Score = 32.7 bits (73), Expect = 0.21 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = -2 Query: 408 KEAEGVQVTSREVEKAVAEMMGDGPEGSXXXXXXXXXXXXXXXXXXESGSSHSDLTDMIR 229 +E GV V V+KAV E+MG+ + E GSSHS+++ +++ Sbjct: 426 EEKIGVLVDKEGVKKAVEELMGESDDAKERRRRAKELGDSAHKAVEEGGSSHSNISFLLQ 485 Query: 228 YVTDLSK 208 + +L++ Sbjct: 486 DIMELAE 492
>PRTP_HCMVA (P16724) Probable processing and transport protein UL56 (HFLF0| protein) Length = 850 Score = 31.2 bits (69), Expect = 0.61 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +1 Query: 73 TYSRKWKILNANLRHLYRQHSILLVLLSELGRPGHRARVPLA 198 TY+++W +L + LY+ + L+L L RP VP A Sbjct: 735 TYNKEWPLLLRHEGSLYKSKDLYLLLYRHLSRPDESGDVPTA 776
>UFOG4_MANES (Q40286) Anthocyanidin 3-O-glucosyltransferase (EC 2.4.1.115)| (Flavonol 3-O-glucosyltransferase 4) (UDP-glucose flavonoid 3-O-glucosyltransferase 4) (Fragment) Length = 241 Score = 31.2 bits (69), Expect = 0.61 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = -2 Query: 396 GVQVTSREVEKAVAEMMGDGPEGSXXXXXXXXXXXXXXXXXXESGSSHSDLTDMIRYVTD 217 G + +V+KA+ +M G EG E GSS+ D+ +I+YV++ Sbjct: 176 GAVMKKEQVKKAIEIVMDKGKEGEERRRRAREIGEMAKRTIEEGGSSYLDMEMLIQYVSE 235 Query: 216 LSKQRS 199 S R+ Sbjct: 236 RSPSRA 241
>YBOX2_MOUSE (Q9Z2C8) Y-box-binding protein 2 (Germ cell-specific Y-box-binding| protein) (FRGY2 homolog) Length = 360 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -1 Query: 244 DGHDPLCHGPVEAEKPREGRELDGPAFRARREEPTG 137 DG GP + +P R + P F+ RR++P G Sbjct: 301 DGETKPSQGPTDGSRPEPQRPRNRPYFQRRRQQPPG 336
>DHS27_CAEEL (Q11177) Putative oxidoreductase dhs-27 (EC 1.-.-.-)| Length = 816 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 127 AGTNDAS*HLGSSISWNKFNTGSCCIRKC 41 +G+ AS HLGS I W +TG+ C C Sbjct: 343 SGSEVASNHLGSIIDWQNVHTGNICEDFC 371
>CBK1_DEBHA (Q6BLJ9) Serine/threonine-protein kinase CBK1 (EC 2.7.11.1)| Length = 716 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -2 Query: 267 SGSSHSDLTDMIRYVTDLSKQRSRERDASSMARPSELGEKNQQD 136 + S+SDL M + DL +Q S +PS+LG++ Q D Sbjct: 68 NNGSNSDLPQMGTFQQDLQRQNIPNLRFSQQNQPSDLGQEFQDD 111
>SHP_MOUSE (Q62227) Nuclear receptor 0B2 (Orphan nuclear receptor SHP) (Small| heterodimer partner) Length = 260 Score = 28.9 bits (63), Expect = 3.0 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Frame = +1 Query: 277 GRPRLSGDLVGPEPPRRPLRPVAHHLC----NRLLHLAARH 387 GRP + L+ P P RP+ P +H C R + L A H Sbjct: 16 GRPTILYALLSPSPRTRPVAPASHSHCLCQQQRPVRLCAPH 56
>UVRC_PSEFL (P32966) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 607 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Frame = -2 Query: 225 VTDLSKQRSRERDASSMARPSELGEKNQQDAVLPV----QMTQVSI*DLP-FPGISSTLD 61 +T +R + R S++ + +G K ++D + ++++ SI ++ PGIS L Sbjct: 538 ITGHRARRGKTRRTSTLEDVAGVGPKRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLA 597 Query: 60 HVVYANVKLHSE 25 ++YAN LHSE Sbjct: 598 ELIYAN--LHSE 607
>UVRC_PSEF5 (Q4KAR9) UvrABC system protein C (Protein uvrC) (Excinuclease ABC| subunit C) Length = 607 Score = 28.5 bits (62), Expect = 4.0 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Frame = -2 Query: 225 VTDLSKQRSRERDASSMARPSELGEKNQQDAVLPV----QMTQVSI*DLP-FPGISSTLD 61 +T +R + R S++ + +G K ++D + ++++ SI ++ PGIS L Sbjct: 538 ITGHRARRGKTRRTSTLEGVAGVGPKRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLA 597 Query: 60 HVVYANVKLHSE 25 ++YAN LHSE Sbjct: 598 ELIYAN--LHSE 607
>SYS_AERPE (Q9YAG3) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 463 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Frame = +1 Query: 85 KWKILNANLRHLYRQHSILLVLLSELGRPGHRAR-VPLAASLLRQVRDIADHVRQVGMR* 261 +W+ L + + R+H+ + ++++ G R R + A LLR+ D+ + +++V Sbjct: 43 EWRRLLTMVNEVRRRHNEITRMIAKAGSREERERLIAEAKRLLREREDLEEKLKKVERER 102 Query: 262 PAFLHGRPRL-SGDL-VGPEPPRRPL 333 L G P + + D+ VG E RP+ Sbjct: 103 EEALLGLPNIVAPDVPVGDESATRPI 128
>SPIN_CBEPV (P23061) Spindolin precursor (Spheroidin) (p50)| Length = 341 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = -2 Query: 162 ELGEKNQQDAVLPVQMTQVSI*DLPF-------PGISSTLDHVVYANVKLHSEGTATLRP 4 +L + Q + V+ ++ ++ D + P + D+VV+AN+ L T TLRP Sbjct: 144 QLSDNQQSNVVMELEFCPTAVHDPSYYEVYITNPSFNVYTDNVVWANLDLIYNNTVTLRP 203
>SRGP2_MOUSE (Q812A2) SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (srGAP2)| (WAVE-associated Rac GTPase-activating protein) (WRP) (Rho-GTPase-activating protein 14) Length = 1099 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Frame = +1 Query: 280 RPRLSGDLVGPE---PPRRPLRPVAHH 351 +P LS L G + PP RP+RPV H Sbjct: 1040 KPALSARLAGAQLRPPPMRPVRPVVQH 1066
>SRGP2_HUMAN (O43295) SLIT-ROBO Rho GTPase-activating protein 3 (srGAP3) (srGAP2)| (WAVE-associated Rac GTPase-activating protein) (WRP) (Mental disorder-associated GAP) (Rho-GTPase-activating protein 14) Length = 1099 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Frame = +1 Query: 280 RPRLSGDLVGPE---PPRRPLRPVAHH 351 +P LS L G + PP RP+RPV H Sbjct: 1040 KPALSARLAGAQLRPPPMRPVRPVVQH 1066
>SYS_SULSO (O33780) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 457 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = +1 Query: 82 RKWKILNANLRHLYRQHSILLVLLSELGRPGHRARVPLAASLLRQVRDIADHVRQVGMR* 261 +KW+ + + L QH++L +S+L + ++ + +LL+ + + + ++ Sbjct: 38 KKWRQVLQEVEKLRHQHNVLSSQISKLSGEERKKKIEESKNLLKILEEKEKELEEIENER 97 Query: 262 PAFLHGRPRLSGDLV--GPE 315 L P L D V GP+ Sbjct: 98 DRLLSSLPNLVADDVPNGPD 117
>ZN346_MOUSE (Q9R0B7) Zinc finger protein 346 (Just another zinc finger protein)| Length = 294 Score = 27.3 bits (59), Expect = 8.9 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = -1 Query: 244 DGHDPLCHGPVEAEKPREGRELDGPAF---RARR--EEPTGCCAAGTND 113 D DP GP + + EGRE DG F RARR E +G AG + Sbjct: 10 DAADPGEAGPYKGSEEPEGREPDGVRFDRERARRLWEAVSGAQPAGREE 58 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,535,890 Number of Sequences: 219361 Number of extensions: 922628 Number of successful extensions: 2670 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2668 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
