>SYV_BUCAI (P57447) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 955

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 8/54 (14%)
 Frame = +3

Query: 90  INLDHGIEAFITEDVHQDKRLFLTDSHTV-----YPEF---LKDKRVTMKLNWL 227
           + L H I  FITE + Q  +L    S        +PE+   L DK++ +++NW+
Sbjct: 747 LKLAHPIMPFITETIWQRIKLIQNISEKTIMLQDFPEYNHKLFDKKILVQMNWM 800

>E4PD_SHIFL (P0A9B9) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 244 HLLDFSISHGDDAWMIRRDSD 306
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECOLI (P0A9B6) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 244 HLLDFSISHGDDAWMIRRDSD 306
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECOL6 (P0A9B7) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 244 HLLDFSISHGDDAWMIRRDSD 306
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>E4PD_ECO57 (P0A9B8) D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.-) (E4PDH)|
          Length = 338

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 244 HLLDFSISHGDDAWMIRRDSD 306
           HLL +  SHG  AW +R++ D
Sbjct: 45  HLLKYDTSHGRFAWEVRQERD 65

>DPO4_METAC (Q8TIW3) DNA polymerase IV (EC 2.7.7.7) (Pol IV)|
          Length = 366

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 13  QDKSQSMYTRLARHQIARTDSRFVQTLILTME*KHS*LRTYTKTR 147
           Q+   S+  +LA   I + DSR +   ++T+   +S  RTYTK+R
Sbjct: 269 QELILSLLEKLAGDVIEKLDSRELSFRVVTVTVINSNFRTYTKSR 313


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,036,094
Number of Sequences: 219361
Number of extensions: 632469
Number of successful extensions: 1341
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)