>gb|AY676468.1| Zalophus californianus microsatellite ZcCgDh46 sequence
          Length = 456

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 102 ggaagtagtggagggactggaga 124
           |||||||||||||||||||||||
Sbjct: 412 ggaagtagtggagggactggaga 434

>gb|AC139027.12| Mus musculus chromosome 18, clone RP23-396C22, complete sequence
          Length = 195153

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     gaaaacacattttattcaaac 25
             |||||||||||||||||||||
Sbjct: 29580 gaaaacacattttattcaaac 29600

>gb|AC004648.1| Homo sapiens chromosome 5, PAC clone 17e19 (LBNL H148), complete
             sequence
          Length = 140101

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    attcaaactaattcagaataa 38
             |||||||||||||||||||||
Sbjct: 85335 attcaaactaattcagaataa 85355

>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence
          Length = 234778

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 5      gaaaacacattttattcaaac 25
              |||||||||||||||||||||
Sbjct: 148102 gaaaacacattttattcaaac 148122

>gb|AC102055.13| Mus musculus chromosome 18, clone RP23-52J5, complete sequence
          Length = 220747

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 5    gaaaacacattttattcaaac 25
            |||||||||||||||||||||
Sbjct: 5283 gaaaacacattttattcaaac 5263

>gb|AC022448.7| Homo sapiens chromosome 5 clone RP11-78G3, complete sequence
          Length = 111000

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     aaaacacattttattcaaact 26
             |||||||||||||||||||||
Sbjct: 57229 aaaacacattttattcaaact 57249

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    ctcggtagaccagcggcagc 292
              ||||||||||||||||||||
Sbjct: 971987 ctcggtagaccagcggcagc 971968

>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence
          Length = 245002

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   gtagaaaataaatacaggac 161
             ||||||||||||||||||||
Sbjct: 40921 gtagaaaataaatacaggac 40940

>gb|AC103363.6| Mus musculus chromosome 17, clone RP24-247H9, complete sequence
          Length = 222909

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    ttgtagaaaataaatacagg 159
              ||||||||||||||||||||
Sbjct: 161597 ttgtagaaaataaatacagg 161578

>emb|AL354675.20| Human DNA sequence from clone RP11-217F15 on chromosome 9, complete
              sequence
          Length = 180185

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      aaaacacattttattcaaactaat 29
              ||||||||||||||||||| ||||
Sbjct: 166031 aaaacacattttattcaaaataat 166008

>emb|AL138685.21| Human DNA sequence from clone RP11-186J16 on chromosome 13 Contains the
             3' end of the LHFP gene for lipoma HMGIC fusion partner,
             complete sequence
          Length = 84686

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   ggagggactggagagaatat 130
             ||||||||||||||||||||
Sbjct: 48411 ggagggactggagagaatat 48430

>emb|AL049648.9|HSJ1178H5 Human DNA sequence from clone RP5-1178H5 on chromosome 20 Contains the
              RPL17P1 gene for ribosomal protein L17 pseudogene 1 a novel
              gene and part of the C20orf26 gene, complete sequence
          Length = 126130

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 176    tagtaaaaattaaacggcag 195
              ||||||||||||||||||||
Sbjct: 107285 tagtaaaaattaaacggcag 107266

>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142650

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   gaatagtaaaaattaaacgg 192
             ||||||||||||||||||||
Sbjct: 38597 gaatagtaaaaattaaacgg 38616

>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence
          Length = 172715

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    tatgtgatctccttgtagaa 147
              ||||||||||||||||||||
Sbjct: 104843 tatgtgatctccttgtagaa 104862

>gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence
          Length = 182747

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tatgtgatctccttgtagaa 147
             ||||||||||||||||||||
Sbjct: 91765 tatgtgatctccttgtagaa 91746

>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      ccggggttgatcaatcacat 101
               ||||||||||||||||||||
Sbjct: 2504995 ccggggttgatcaatcacat 2505014

>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 168376

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   gaagtagtggagggactggagaga 126
             |||||| |||||||||||||||||
Sbjct: 48900 gaagtattggagggactggagaga 48877

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     ctccttgtagaaaataaata 155
               ||||||||||||||||||||
Sbjct: 2606395 ctccttgtagaaaataaata 2606376

>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence
          Length = 198727

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    aaggactcatgactggcagc 232
              ||||||||||||||||||||
Sbjct: 144520 aaggactcatgactggcagc 144539

>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 183830

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 103   gaagtagtggagggactggagaga 126
             |||||| |||||||||||||||||
Sbjct: 89596 gaagtattggagggactggagaga 89619

>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence
          Length = 181094

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ttgtagaaaataaatacagg 159
             ||||||||||||||||||||
Sbjct: 28645 ttgtagaaaataaatacagg 28626

>emb|AL133304.4|CNS01DUL Human chromosome 14 DNA sequence BAC R-116N8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 141905

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   tgtagaaaataaatacagga 160
             ||||||||||||||||||||
Sbjct: 83472 tgtagaaaataaatacagga 83453


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,793,652
Number of Sequences: 3902068
Number of extensions: 3793652
Number of successful extensions: 85105
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85039
Number of HSP's gapped (non-prelim): 66
length of query: 306
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 284
effective length of database: 17,147,199,772
effective search space: 4869804735248
effective search space used: 4869804735248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)