ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506994.1| PREDICTED Oryza sativa (japonica cultivar-group... 234 2e-58
2ref|XM_467983.2| Oryza sativa (japonica cultivar-group), mRNA 234 2e-58
3ref|XM_467984.1| Oryza sativa (japonica cultivar-group), mRNA 234 2e-58
4ref|XM_507534.1| PREDICTED Oryza sativa (japonica cultivar-group... 234 2e-58
5ref|XM_506993.2| PREDICTED Oryza sativa (japonica cultivar-group... 234 2e-58
6dbj|AK104659.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
7dbj|AK098996.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
8dbj|AK060304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
9dbj|AK059725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
10dbj|AK099120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 2e-49
11gb|BT017874.1| Zea mays clone EL01N0513B08.c mRNA sequence 145 1e-31
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
13dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
14ref|NM_121002.2| Arabidopsis thaliana inorganic diphosphatase/ m... 66 1e-07
15gb|AY551439.1| Arabidopsis thaliana chloroplast inorganic pyroph... 66 1e-07
16gb|AY079355.1| Arabidopsis thaliana putative inorganic pyrophosp... 66 1e-07
17gb|AY045945.1| Arabidopsis thaliana putative inorganic pyrophosp... 66 1e-07
18gb|AY087275.1| Arabidopsis thaliana clone 33506 mRNA, complete s... 66 1e-07
19dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 66 1e-07
20gb|AY109365.1| Zea mays CL4861_1 mRNA sequence 66 1e-07
21emb|AJ252210.1|ATH252210 Arabidopsis thaliana mRNA for inorganic... 66 1e-07
22emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, B... 66 1e-07
23emb|BX830340.1|CNS0A1HN Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
24emb|AJ298231.1|CRE298231 Chlamydomonas reinhardtii partial mRNA ... 46 0.089
25gb|AC117535.2| Homo sapiens chromosome 5 clone RP11-937M12, comp... 42 1.4
26gb|AC108126.2| Homo sapiens chromosome 5 clone RP11-613D17, comp... 42 1.4
27gb|BT017827.1| Zea mays clone EL01N0508E10.c mRNA sequence 40 5.5
28emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 5.5
29emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chr... 40 5.5
30emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chr... 40 5.5
31emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in... 40 5.5
32dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 5.5
33gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, comp... 40 5.5
34gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, compl... 40 5.5
35gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 5.5
36gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 5.5
37gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 5.5
38ref|NM_061649.2| Caenorhabditis elegans F45C12.10 (F45C12.10) mR... 40 5.5
39dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 5.5
40dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 5.5
41emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in ... 40 5.5
42gb|AF016684.1| Caenorhabditis elegans cosmid F45C12, complete se... 40 5.5
43emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 5.5
44emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 5.5
45emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on ch... 40 5.5 
>ref|XM_506994.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1767_D02.15-2
           mRNA
          Length = 1130

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 886 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 827

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 826 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 767

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 766 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 707

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 706 gtcaatgttcccggaaaatgct 685
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>ref|XM_467983.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1187

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 943 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 884

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 883 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 824

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 823 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 764

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 763 gtcaatgttcccggaaaatgct 742
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>ref|XM_467984.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1125

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 944 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 885

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 884 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 825

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 824 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 765

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 764 gtcaatgttcccggaaaatgct 743
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>ref|XM_507534.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1767_D02.15-2
           mRNA
          Length = 1198

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 944 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 885

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 884 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 825

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 824 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 765

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 764 gtcaatgttcccggaaaatgct 743
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>ref|XM_506993.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1767_D02.15-2
           mRNA
          Length = 1204

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 948 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 889

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 888 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 829

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 828 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 769

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 768 gtcaatgttcccggaaaatgct 747
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>dbj|AK104659.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D07, full
           insert sequence
          Length = 1187

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 943 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 884

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 883 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 824

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 823 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 764

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 763 gtcaatgttcccggaaaatgct 742
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>dbj|AK098996.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102B11, full
           insert sequence
          Length = 1199

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 945 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 886

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 885 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 826

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 825 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 766

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 765 gtcaatgttcccggaaaatgct 744
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>dbj|AK060304.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A07, full
           insert sequence
          Length = 1130

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 886 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 827

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 826 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 767

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 766 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 707

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 706 gtcaatgttcccggaaaatgct 685
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>dbj|AK059725.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B08, full
           insert sequence
          Length = 1204

 Score =  234 bits (118), Expect = 2e-58
 Identities = 181/202 (89%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 948 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 889

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||||||||||||||||| |||| |||||  || 
Sbjct: 888 ttggtttcttctatgaccttcagagcatattccttgcttgtgggtttgttgcccagacca 829

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||
Sbjct: 828 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccagtctctgatggca 769

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 768 gtcaatgttcccggaaaatgct 747
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>dbj|AK099120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A18, full
           insert sequence
          Length = 1123

 Score =  204 bits (103), Expect = 2e-49
 Identities = 178/202 (88%), Gaps = 2/202 (0%)
 Strand = Plus / Minus

                                                                       
Query: 209 taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
           |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 942 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 883

                                                                       
Query: 269 ttggtttcctctatcaccttcagggcatattccttgcttgtgggcttgtcgcccaagccg 328
           |||||||| ||||| |||||||| |||||| ||||||||||||| |||| |||||  || 
Sbjct: 882 ttggtttcttctatgaccttcagagcatatcccttgcttgtgggtttgttgcccagacca 823

                                                                       
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctctgattgca 388
           |||||||| || ||||| |||||||| ||||||||||| |||||||||  |||||| |||
Sbjct: 822 aatctgtttgcaggcttaccgtctggtatcttgtagtccctgaaccag--tctgatggca 765

                                 
Query: 389 gtcaacgttcccggaaaatgct 410
           ||||| ||||||||||||||||
Sbjct: 764 gtcaatgttcccggaaaatgct 743
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>gb|BT017874.1| Zea mays clone EL01N0513B08.c mRNA sequence
          Length = 961

 Score =  145 bits (73), Expect = 1e-31
 Identities = 145/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 242 ctcttcaccaatttctcccatgactcgttggtttcctctatcaccttcagggcatattcc 301
           ||||| ||||||||||||||||| |||||||| || |  || ||||||||||| ||||||
Sbjct: 703 ctctttaccaatttctcccatgattcgttggtctcttgaatgaccttcagggcgtattcc 644

                                                                       
Query: 302 ttgcttgtgggcttgtcgcccaagccgaatctgttggcgggcttcccgtctgggatcttg 361
           ||||||| |||||||| ||| |  || ||| ||||||| ||||| || || || ||||||
Sbjct: 643 ttgcttgcgggcttgttgccgagaccaaatttgttggcaggctttccatcaggtatcttg 584

                                                            
Query: 362 tagtctctgaaccagtctctgattgcagtcaacgttcccggaaaatgct 410
           ||||||||||||||||||||||| |||||||  || |||||||||||||
Sbjct: 583 tagtctctgaaccagtctctgatggcagtcagtgtccccggaaaatgct 535
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                            
Query: 209      taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
                |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 32396402 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 32396343

                                                  
Query: 269      ttggtttcctctatcaccttcagggcatattcct 302
                |||||||| ||||| |||||||| ||||||||||
Sbjct: 32396342 ttggtttcttctatgaccttcagagcatattcct 32396309



 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                            
Query: 300      ccttgcttgtgggcttgtcgcccaagccgaatctgttggcgggcttcccgtctgggatct 359
                ||||||||||||| |||| |||||  || |||||||| || ||||| |||||||| ||||
Sbjct: 32396234 ccttgcttgtgggtttgttgcccagaccaaatctgtttgcaggcttaccgtctggtatct 32396175

                                                         
Query: 360      tgtagtctctgaaccagtctctgattgcagtcaacgttccc 400
                ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 32396174 tgtagtccctgaaccagtctctgatggcagtcaatgttccc 32396134
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>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1767_D02
          Length = 139145

 Score =  115 bits (58), Expect = 1e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                         
Query: 209   taggctagcgagagctctcccgccgggattttcctcttcaccaatttctcccatgactcg 268
             |||||||| ||||||||||| || ||||| ||||| |||||||||||||||||||| |||
Sbjct: 57915 taggctagtgagagctctccagcagggatattccttttcaccaatttctcccatgattcg 57856

                                               
Query: 269   ttggtttcctctatcaccttcagggcatattcct 302
             |||||||| ||||| |||||||| ||||||||||
Sbjct: 57855 ttggtttcttctatgaccttcagagcatattcct 57822



 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Minus

                                                                         
Query: 300   ccttgcttgtgggcttgtcgcccaagccgaatctgttggcgggcttcccgtctgggatct 359
             ||||||||||||| |||| |||||  || |||||||| || ||||| |||||||| ||||
Sbjct: 57747 ccttgcttgtgggtttgttgcccagaccaaatctgtttgcaggcttaccgtctggtatct 57688

                                                      
Query: 360   tgtagtctctgaaccagtctctgattgcagtcaacgttccc 400
             ||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 57687 tgtagtccctgaaccagtctctgatggcagtcaatgttccc 57647
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>ref|NM_121002.2| Arabidopsis thaliana inorganic diphosphatase/ magnesium ion binding
           / pyrophosphatase AT5G09650 mRNA, complete cds
          Length = 1175

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 878 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 826
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>gb|AY551439.1| Arabidopsis thaliana chloroplast inorganic pyrophosphatase mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1077

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 782 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 730
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>gb|AY079355.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At5g09650)
           mRNA, complete cds
          Length = 934

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 782 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 730
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>gb|AY045945.1| Arabidopsis thaliana putative inorganic pyrophosphatase (At5g09650)
           mRNA, complete cds
          Length = 1161

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 866 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 814
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>gb|AY087275.1| Arabidopsis thaliana clone 33506 mRNA, complete sequence
          Length = 1139

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 879 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 827
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>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16
          Length = 68098

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 329   aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
             |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 12409 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 12461
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>gb|AY109365.1| Zea mays CL4861_1 mRNA sequence
          Length = 1506

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 356 atcttgtagtctctgaaccagtctctgattgcagtca 392
           ||||||||||||||||||||||||||||| |||||||
Sbjct: 211 atcttgtagtctctgaaccagtctctgatggcagtca 175
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>emb|AJ252210.1|ATH252210 Arabidopsis thaliana mRNA for inorganic pyrophosphatase (ppa gene)
          Length = 911

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 329 aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 784 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 732
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>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project)
          Length = 92491

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                  
Query: 329   aatctgttggcgggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
             |||||||| || ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 57175 aatctgttagcaggctttccatctgggatcttgtagtctctaaaccagtctct 57123
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>emb|BX830340.1|CNS0A1HN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZD07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1094

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 341 ggcttcccgtctgggatcttgtagtctctgaaccagtctct 381
           ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 835 ggctttccatctgggatcttgtagtctctaaaccagtctct 795
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>emb|AJ298231.1|CRE298231 Chlamydomonas reinhardtii partial mRNA for inorganic
           pyrophosphatase precursor (ppaI gene)
          Length = 1147

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 333 tgttggcgggcttcccgtctgggatcttgtagtctctgaacca 375
           ||||||||||||| ||||| ||||| |||||||| | ||||||
Sbjct: 766 tgttggcgggcttgccgtcagggattttgtagtcccggaacca 724
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>gb|AC117535.2| Homo sapiens chromosome 5 clone RP11-937M12, complete sequence
          Length = 176581

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 52    ttattcaatcattatttcctgtttt 76
             |||| ||||||||||||||||||||
Sbjct: 59472 ttatacaatcattatttcctgtttt 59448
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>gb|AC108126.2| Homo sapiens chromosome 5 clone RP11-613D17, complete sequence
          Length = 85638

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 52    ttattcaatcattatttcctgtttt 76
             |||| ||||||||||||||||||||
Sbjct: 81641 ttatacaatcattatttcctgtttt 81665
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>gb|BT017827.1| Zea mays clone EL01N0508E10.c mRNA sequence
          Length = 966

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 ggtttcctctatcaccttca 290
           ||||||||||||||||||||
Sbjct: 668 ggtttcctctatcaccttca 649
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1038759 tgattattcaatcattattt 1038778
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>emb|AL662802.14| Mouse DNA sequence from clone RP23-34N10 on chromosome 11, complete
              sequence
          Length = 224024

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    attttcctcttcaccaattt 255
              ||||||||||||||||||||
Sbjct: 145425 attttcctcttcaccaattt 145406
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>emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chromosome 11 Contains part
              of the Slit 3 gene for slit homolog 3 (Drosophila),
              complete sequence
          Length = 169097

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     tgttttgcagatgaagaagc 111
              ||||||||||||||||||||
Sbjct: 145851 tgttttgcagatgaagaagc 145832
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>emb|BX901978.14| Zebrafish DNA sequence from clone DKEY-155M6 in linkage group 18,
              complete sequence
          Length = 168101

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gtatgtcactgaaagaatgt 173
              ||||||||||||||||||||
Sbjct: 128817 gtatgtcactgaaagaatgt 128798
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1086457 tgattattcaatcattattt 1086476
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>gb|AC099569.2| Homo sapiens chromosome 1 clone RP5-1007M22, complete sequence
          Length = 126833

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tgttttgcagatgaagaagc 111
             ||||||||||||||||||||
Sbjct: 99234 tgttttgcagatgaagaagc 99215
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>gb|AC093423.2| Homo sapiens chromosome 1 clone RP11-413E1, complete sequence
          Length = 185182

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    tgttttgcagatgaagaagc 111
             ||||||||||||||||||||
Sbjct: 10052 tgttttgcagatgaagaagc 10033
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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1049733 tgattattcaatcattattt 1049752
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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tgattattcaatcattattt 68
              ||||||||||||||||||||
Sbjct: 946122 tgattattcaatcattattt 946141
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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1026259 tgattattcaatcattattt 1026278
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>ref|NM_061649.2| Caenorhabditis elegans F45C12.10 (F45C12.10) mRNA, complete cds
          Length = 826

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 244 cttcaccaatttctcccatg 263
           ||||||||||||||||||||
Sbjct: 303 cttcaccaatttctcccatg 284
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1010036 tgattattcaatcattattt 1010055
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1010129 tgattattcaatcattattt 1010148
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>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13,
             complete sequence
          Length = 151298

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    ttattcaatcattatttcctgttt 75
             |||||| |||||||||||||||||
Sbjct: 95282 ttattctatcattatttcctgttt 95305
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>gb|AF016684.1| Caenorhabditis elegans cosmid F45C12, complete sequence
          Length = 38456

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  cttcaccaatttctcccatg 263
            ||||||||||||||||||||
Sbjct: 4691 cttcaccaatttctcccatg 4672
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      tgattattcaatcattattt 68
               ||||||||||||||||||||
Sbjct: 1050653 tgattattcaatcattattt 1050672
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tgattattcaatcattattt 68
              ||||||||||||||||||||
Sbjct: 976928 tgattattcaatcattattt 976947
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>emb|AL590969.12| Mouse DNA sequence from clone RP23-281C18 on chromosome 11, complete
             sequence
          Length = 250353

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   ccgggattttcctcttcacc 250
             ||||||||||||||||||||
Sbjct: 87564 ccgggattttcctcttcacc 87583


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,517,835
Number of Sequences: 3902068
Number of extensions: 3517835
Number of successful extensions: 72204
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71983
Number of HSP's gapped (non-prelim): 220
length of query: 411
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 389
effective length of database: 17,147,199,772
effective search space: 6670260711308
effective search space used: 6670260711308
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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