>NCLN_HUMAN (Q969V3) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = +1

Query: 253 VVVTHYPALPCAGLLVQKRRGAAMGGFVILCLARCFSLLYTTERNGTTIEVDMV*WMGER 432
           V+V HY A   A  L         G  V+L LAR FS LYT +R      +      G +
Sbjct: 220 VIVAHYDAFGVAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASGGGK 279

Query: 433 VCYSGT 450
             Y GT
Sbjct: 280 FNYQGT 285

>NCLN_RAT (Q5XIA1) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = +1

Query: 253 VVVTHYPALPCAGLLVQKRRGAAMGGFVILCLARCFSLLYTTERNGTTIEVDMV*WMGER 432
           V+V HY A   A  L         G  V+L LAR FS LYT +R      +      G +
Sbjct: 220 VIVAHYDAFGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASGGGK 279

Query: 433 VCYSGT 450
             Y GT
Sbjct: 280 FNYQGT 285

>NCLN_MOUSE (Q8VCM8) Nicalin precursor (Nicastrin-like protein)|
          Length = 563

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 23/66 (34%), Positives = 28/66 (42%)
 Frame = +1

Query: 253 VVVTHYPALPCAGLLVQKRRGAAMGGFVILCLARCFSLLYTTERNGTTIEVDMV*WMGER 432
           V+V HY A   A  L         G  V+L LAR FS LYT +R      +      G +
Sbjct: 220 VIVAHYDAFGVAPWLSLGADSNGSGISVLLELARLFSRLYTYKRTHAAYNLLFFASGGGK 279

Query: 433 VCYSGT 450
             Y GT
Sbjct: 280 FNYQGT 285

>BIM1_ARATH (Q9LEZ3) Transcription factor BIM1 (BES1-interacting Myc-like|
           protein 1) (Transcription factor EN 126) (AtbHLH 46)
          Length = 530

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = -3

Query: 482 AHQRAPPPTSPVPL*HTRSPIHQTISTSIVVPFRSVVYNKEKHRAKQRITKPPIAAPLRF 303
           A ++ PPP  P PL H       T + S +  F         H   QRI KP ++ P+ F
Sbjct: 73  ASEKPPPPAPPPPLQHVLPGGIGTYTISPIPYF---------HHHHQRIPKPELSPPMMF 123

>ASCL2_RAT (P19360) Achaete-scute homolog 2|
          Length = 260

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = +3

Query: 252 SSGDSLSRIALRRPPRPEAQRCGNGGLRYXXXXXXXXXVVYNRTERNNYRGRYGLMD-G* 428
           SSG + +  A RRPP PE  RC                 V  R ER   R R  L++ G 
Sbjct: 81  SSGVAGACTARRRPPSPELLRCSRRRRSGATEASSSSAAVARRNERE--RNRVKLVNLGF 138

Query: 429 TCMLQWYRRGGGRRAL 476
             + Q    GG  + L
Sbjct: 139 QALRQHVPHGGANKKL 154

>NCLN_CHICK (Q5ZJH2) Nicalin precursor (Nicastrin-like protein)|
          Length = 562

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 22/66 (33%), Positives = 27/66 (40%)
 Frame = +1

Query: 253 VVVTHYPALPCAGLLVQKRRGAAMGGFVILCLARCFSLLYTTERNGTTIEVDMV*WMGER 432
           V+V HY +   A  L         G  V+L LAR FS LYT  R      +      G +
Sbjct: 219 VIVAHYDSFGVAPWLSHGADSNGSGVSVLLELARLFSRLYTYRRTHAGYNLLFFASGGGK 278

Query: 433 VCYSGT 450
             Y GT
Sbjct: 279 FNYQGT 284


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,782,357
Number of Sequences: 219361
Number of extensions: 1123476
Number of successful extensions: 2812
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)