>IGHG3_HUMAN (P01860) Ig gamma-3 chain C region (Heavy chain disease protein)|
           (HDC)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.049
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -1

Query: 324 PDPSTRNRTLRTPPTHPRCSATR---TPTPAPSCELPRQCDEHDAKPRLAA 181
           P+P    ++  TPP  PRC   +   TP P P C  P+ CD     PR  A
Sbjct: 28  PEP----KSCDTPPPCPRCPEPKSCDTPPPCPRCPEPKSCDTPPPCPRCPA 74



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = -1

Query: 300 TLRTPPTHPRCSATRTPTPAPSCELPRQCDEHDAKPR 190
           T  T P  P   +  TP P P C  P+ CD     PR
Sbjct: 20  TTHTCPRCPEPKSCDTPPPCPRCPEPKSCDTPPPCPR 56

>SGS3_DROSI (P13729) Salivary glue protein Sgs-3 precursor|
          Length = 217

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 20/70 (28%), Positives = 23/70 (32%), Gaps = 6/70 (8%)
 Frame = -1

Query: 438 TRACTRC-PRSTATCXXXXXXXXXXXXXXXXXXXXXXXTPDP-----STRNRTLRTPPTH 277
           T+A T C P +  TC                          P     ST   T R PPT 
Sbjct: 30  TKATTTCAPPTKPTCKSTSTTTTTTTTTTTTTTTTRAPPTKPTCKSTSTTTTTTRAPPTK 89

Query: 276 PRCSATRTPT 247
           P C +T T T
Sbjct: 90  PTCKSTSTTT 99

>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog|
            (Histone-lysine N-methyltransferase, H3 lysine-4 specific
            MLL3) (EC 2.1.1.43) (Homologous to ALR protein)
          Length = 4911

 Score = 33.5 bits (75), Expect = 0.25
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 318  PSTRNRTLRTPPTHPRCSATRTPTPAPSCELPRQCDEHDAKP 193
            PST +  +  PPT      T TP  +   ELP+Q D+   +P
Sbjct: 3622 PSTPHSDITAPPTPGISETTSTPAVSTPSELPQQADQESVEP 3663

>LYPD3_HUMAN (O95274) Ly6/PLAUR domain-containing protein 3 precursor|
           (GPI-anchored metastasis-associated protein C4.4A
           homolog) (Matrigel-induced gene C4 protein) (MIG-C4)
          Length = 346

 Score = 33.1 bits (74), Expect = 0.32
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
 Frame = -1

Query: 324 PDPSTRNRT--LRTPPTHP-RCSATRTPTPAPSCELPRQCDEHDA----KPRLAAAVSTI 166
           P+P+T   T  + T  + P R ++T  P PAP+ + PRQ  EH+A    +PRL    +  
Sbjct: 244 PEPTTVASTTSVTTSTSAPVRPTSTTKPMPAPTSQTPRQGVEHEASRDEEPRLTGGAAGH 303

Query: 165 KPRS 154
           + RS
Sbjct: 304 QDRS 307

>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -1

Query: 324 PDPSTRNRTLRTPPTHPRCSATRTPTPAPS-CELPRQCDEHDAKPRLAAAVSTIKPRS 154
           P PS       TP  HPR  +  +P+P+PS  + P   +     P  + +V+++ P S
Sbjct: 171 PSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSLAPSPSDSVASLAPSS 228

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -1

Query: 324  PDPSTRNRTLRTPPTHPRCSA---TRTPTPAPSCELPRQCDEHDAKPRLAAAVST 169
            P   + + T       PR +A   T+TP+PAP+ ++PR        P +A    T
Sbjct: 1481 PSSPSESPTFSPGKMGPRATAEFSTQTPSPAPASDMPRSPGAPTPSPMVAQGTQT 1535

>GRLF1_HUMAN (Q9NRY4) Glucocorticoid receptor DNA-binding factor 1 (Glucocorticoid|
            receptor repression factor 1) (GRF-1) (Rho GAP p190A)
            (p190-A)
          Length = 1513

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = -1

Query: 324  PDPSTRNRTLRTPPTHPRCSATRTPTPAPSCELPRQCDEH 205
            P P +  + L   P HP       PTP PS  +P Q  EH
Sbjct: 1479 PTPQSPMQPLLPSPLHPH-----RPTPQPSRNIPWQTKEH 1513

>PAK4_HUMAN (O96013) Serine/threonine-protein kinase PAK 4 (EC 2.7.11.1)|
           (p21-activated kinase 4) (PAK-4)
          Length = 591

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = -2

Query: 347 EPWLLPERRTPVPATVRFVPRPRTPDVQRREPQRL 243
           EP L P   TP    V   P PR+P   +REPQR+
Sbjct: 268 EPQLAPPACTPAAPAVPGPPGPRSP---QREPQRV 299

>SYI_NITWN (Q3SPJ6) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 999

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = +2

Query: 20   DGSWNITSRDGITVAIYMSANSRCAKAT*LLA-----AGYANGSPR*AQADR 160
            DG++ + +  G+ V +  +A ++CA++  +L      + Y + SPR AQA R
Sbjct: 939  DGAFRLPNVQGVAVVVEKAAGTKCARSWKILPTVGSDSEYPDVSPRDAQALR 990


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,196,630
Number of Sequences: 219361
Number of extensions: 840762
Number of successful extensions: 3195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3140
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)