ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart57g11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 227 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 277 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15314376 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 15314326 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 403 agccgtactgcgggggcatctggtacatgc 432 ||||||||||||| ||||||||| |||||| Sbjct: 15314191 agccgtactgcggcggcatctggaacatgc 15314162 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cgccgccgccgcgccgtagt 372 |||||||||||||||||||| Sbjct: 15415624 cgccgccgccgcgccgtagt 15415605 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 9747064 ttcggcggcgccgccgccgc 9747045
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 227 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 277 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31739 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 31689 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 403 agccgtactgcgggggcatctggtacatgc 432 ||||||||||||| ||||||||| |||||| Sbjct: 31554 agccgtactgcggcggcatctggaacatgc 31525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cgccgccgccgcgccgtagt 372 |||||||||||||||||||| Sbjct: 132987 cgccgccgccgcgccgtagt 132968
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 227 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 277 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15322617 agctcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 15322567 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 403 agccgtactgcgggggcatctggtacatgc 432 ||||||||||||| ||||||||| |||||| Sbjct: 15322432 agccgtactgcggcggcatctggaacatgc 15322403 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cgccgccgccgcgccgtagt 372 |||||||||||||||||||| Sbjct: 15423865 cgccgccgccgcgccgtagt 15423846 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 9753103 ttcggcggcgccgccgccgc 9753084
>ref|NM_196696.1| Oryza sativa (japonica cultivar-group) putative metal-binding protein (OSJNBa0046P18.5), mRNA Length = 1080 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 277 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 tcacatgacggagcaggcgttggggttctcgtcgctgaacatctgggg 1033 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 403 agccgtactgcgggggcatctggtacatgc 432 ||||||||||||| ||||||||| |||||| Sbjct: 898 agccgtactgcggcggcatctggaacatgc 869
>gb|BT018956.1| Zea mays clone Contig167.F mRNA sequence Length = 1302 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1131 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 1089
>gb|BT018531.1| Zea mays clone EL01N0434A08.d mRNA sequence Length = 1267 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 909 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 867
>gb|BT017885.1| Zea mays clone EL01N0514G02.c mRNA sequence Length = 870 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 427 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 385
>gb|BT016842.1| Zea mays clone Contig675 mRNA sequence Length = 707 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 467 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 509
>gb|BT024052.1| Zea mays clone EL01N0437G11 mRNA sequence Length = 1768 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1320 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 1278
>gb|BT024032.1| Zea mays clone EL01N0422H11 mRNA sequence Length = 1804 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1359 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 1317
>gb|AY110604.1| Zea mays CL32636_1 mRNA sequence Length = 1024 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 346 acatgacggagcaggcgttggggttctcgtcgctgaagatctg 388
>ref|XM_450636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 751 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 604 tcacatgatggagcaggcgttggggttctcgtcgctgaacat 563
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11923880 tcacatgatggagcaggcgttggggttctcgtcgctgaacat 11923839 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 12286141 ttcggcggcgccgccgccgc 12286160
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105370 tcacatgatggagcaggcgttggggttctcgtcgctgaacat 105329
>dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0441A12 Length = 185437 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 28360 tcacatgatggagcaggcgttggggttctcgtcgctgaacat 28319
>dbj|AK068537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152L24, full insert sequence Length = 751 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 604 tcacatgatggagcaggcgttggggttctcgtcgctgaacat 563
>ref|XM_471278.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 466 acatgacggagcaggcgttggggttctcgtcgctgaa 430
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 18258 acatgacggagcaggcgttggggttctcgtcgctgaa 18294
>emb|AJ508227.1|HVU508227 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 1 Length = 991 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 acatgacggagcaggcgttggggttctcgtcgctgaa 549
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 9420137 acatgacggagcaggcgttggggttctcgtcgctgaa 9420173 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 19202840 acatgacagagcaggcattcgggttttcgtcgctgaagatctg 19202798 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 18791145 cggcggcgccgccgccgcgccg 18791166
>dbj|AK121488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150J09, full insert sequence Length = 803 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 606 acatgacggagcaggcgttggggttctcgtcgctgaa 570
>gb|AY112463.1| Zea mays CL22709_1 mRNA sequence Length = 820 Score = 73.8 bits (37), Expect = 4e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||||||||||||||||||||||||||| Sbjct: 245 acatgacggagcaggcgttggggttctcgtcgctgaa 281
>gb|AY108072.1| Zea mays PCO123189 mRNA sequence Length = 398 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 344 acatgacggagcatgcgttggggttctcgtcgctgaagatctg 302
>gb|DQ207719.1| Zea mays cultivar inbred line Mo17 IDP488 marker Length = 310 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgct 265 |||||||||||||||||||||||||||||||||| Sbjct: 269 acatgacggagcaggcgttggggttctcgtcgct 302
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||| || ||||||||||||||||||||||||||||||| Sbjct: 2848338 tcacatcaccgagcaggcgttggggttctcgtcgctgaaca 2848378 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 3028744 acatgacggcgcaggagttggggttctcgtcgctgaa 3028780 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcg 263 |||||||||| |||||||||||||||||||||| Sbjct: 12880791 tcacatgacgctgcaggcgttggggttctcgtcg 12880824 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 2753323 cggcggcgccgccgccgcgccg 2753302 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 34371604 cggcggcgccgccgccgcgcc 34371624 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gcggcgccgccgccgcgccgt 369 ||||||||||||||||||||| Sbjct: 33451649 gcggcgccgccgccgcgccgt 33451669 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 4599330 tcggcggcgccgccgccgcg 4599311 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcgccgt 369 ||||| |||||||||||||||||| Sbjct: 3997196 tcggccgcgccgccgccgcgccgt 3997173
>gb|BT009077.1| Triticum aestivum clone wip1c.pk005.e10:fis, full insert mRNA sequence Length = 961 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||||| ||||||||||||||||||||||| Sbjct: 582 acatgacggagcatgcgttggggttctcgtcgctgaa 546
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||| || ||||||||||||||||||||||||||||||| Sbjct: 2848449 tcacatcaccgagcaggcgttggggttctcgtcgctgaaca 2848489 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 3028855 acatgacggcgcaggagttggggttctcgtcgctgaa 3028891 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcg 263 |||||||||| |||||||||||||||||||||| Sbjct: 12877554 tcacatgacgctgcaggcgttggggttctcgtcg 12877587 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 2753433 cggcggcgccgccgccgcgccg 2753412 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 34462076 cggcggcgccgccgccgcgcc 34462096 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gcggcgccgccgccgcgccgt 369 ||||||||||||||||||||| Sbjct: 33542159 gcggcgccgccgccgcgccgt 33542179 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 4599445 tcggcggcgccgccgccgcg 4599426 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcgccgt 369 ||||| |||||||||||||||||| Sbjct: 3997307 tcggccgcgccgccgccgcgccgt 3997284
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||| || ||||||||||||||||||||||||||||||| Sbjct: 120294 tcacatcaccgagcaggcgttggggttctcgtcgctgaaca 120334 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 25279 cggcggcgccgccgccgcgccg 25258
>dbj|AK102357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091H19, full insert sequence Length = 1401 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||| || ||||||||||||||||||||||||||||||| Sbjct: 1118 tcacatcaccgagcaggcgttggggttctcgtcgctgaaca 1078
>ref|XM_482288.1| Oryza sativa (japonica cultivar-group), mRNA Length = 453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 453 tcacatgacggcgcaggcgttggggttgtcgtcgctgaa 415
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19238246 tcacatgacggcgcaggcgttggggttgtcgtcgctgaa 19238208
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 11259 tcacatgacggcgcaggcgttggggttgtcgtcgctgaa 11221
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| ||||||||||||||| ||||||||||| Sbjct: 160611 tcacatgacggcgcaggcgttggggttgtcgtcgctgaa 160573
>ref|XM_470243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 468 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 466 acatgacggcgcaggagttggggttctcgtcgctgaa 430
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 67517 acatgacggcgcaggagttggggttctcgtcgctgaa 67481
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 166231 acatgacggcgcaggagttggggttctcgtcgctgaa 166267
>dbj|AK105367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-G06, full insert sequence Length = 822 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||| ||||| ||||||||||||||||||||| Sbjct: 545 acatgacggcgcaggagttggggttctcgtcgctgaa 509
>gb|DQ207718.1| Zea mays cultivar B73 IDP488 marker Length = 256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctc 259 |||||||||||||||||||||||||||| Sbjct: 28 acatgacggagcaggcgttggggttctc 1
>gb|BT019155.1| Zea mays clone Contig818.F mRNA sequence Length = 1093 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 ||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 634 ctcacatcaccgagcacccgttggggttctcgtcgctgaacat 592
>gb|AF528183.2| Brassica rapa subsp. pekinensis putative farnesylated protein mRNA, complete cds Length = 702 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 |||||||| || ||||||||| ||||||||||||||||| Sbjct: 480 tcacatgatggtgcaggcgttagggttctcgtcgctgaa 442
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| |||||||| ||||||||||||||||| Sbjct: 20056774 tcacatgacggcgcaggcgtgcgggttctcgtcgctgaa 20056812 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 24382363 ttcggcggcgccgccgccgc 24382344 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 6582294 ttcggcggcgccgccgccgc 6582275
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||||||| |||||||| ||||||||||||||||| Sbjct: 45048 tcacatgacggcgcaggcgtgcgggttctcgtcgctgaa 45086
>gb|AC155340.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH020D15, complete sequence Length = 143633 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaa 268 |||||||| || ||||||||| ||||||||||||||||| Sbjct: 29792 tcacatgatggtgcaggcgttagggttctcgtcgctgaa 29830
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcg 263 |||||||||| |||||||||||||||||||||| Sbjct: 119007 tcacatgacgctgcaggcgttggggttctcgtcg 119040
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcg 263 |||||||||| |||||||||||||||||||||| Sbjct: 58718 tcacatgacgctgcaggcgttggggttctcgtcg 58685
>dbj|AK066080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051K22, full insert sequence Length = 1071 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcg 263 |||||||||| |||||||||||||||||||||| Sbjct: 759 tcacatgacgctgcaggcgttggggttctcgtcg 726
>gb|AY108632.1| Zea mays PCO084337 mRNA sequence Length = 798 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||| || |||||||||| |||||||||||||||||| Sbjct: 649 tcacatgatggtgcaggcgttgacgttctcgtcgctgaacat 608
>ref|XM_468423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1077 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctga 267 ||||||||| ||||||||||||||||||| Sbjct: 1068 ggagcaggcattggggttctcgtcgctga 1040
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctga 267 ||||||||| ||||||||||||||||||| Sbjct: 35153572 ggagcaggcattggggttctcgtcgctga 35153544 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||||| ||||||||||||||||| || |||||||||| Sbjct: 31590193 tcacatgagcgagcaggcgttggggttgtcatcgctgaaca 31590153 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 228 gctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 |||||||||| | |||||||||||||||||| |||||||| Sbjct: 29499957 gctcacatgatcgcgcaggcgttggggttctcctcgctgaa 29499997 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 8679414 cggcggcgccgccgccgcgccg 8679435 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 31715296 cggcggcgccgccgccgcgcc 31715316 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 22279479 cggcggcgccgccgccgcgcc 22279459 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 10702884 ttcggcggcgccgccgccgc 10702903
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 228 gctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 |||||||||| | |||||||||||||||||| |||||||| Sbjct: 94987 gctcacatgatcgcgcaggcgttggggttctcctcgctgaa 95027
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctga 267 ||||||||| ||||||||||||||||||| Sbjct: 48928 ggagcaggcattggggttctcgtcgctga 48900
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||||| ||||||||||||||||| || |||||||||| Sbjct: 80753 tcacatgagcgagcaggcgttggggttgtcatcgctgaaca 80713
>dbj|AK120012.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-A12, full insert sequence Length = 1741 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaaca 270 |||||||| ||||||||||||||||| || |||||||||| Sbjct: 1478 tcacatgagcgagcaggcgttggggttgtcatcgctgaaca 1438
>gb|AY109329.1| Zea mays CL1979_1 mRNA sequence Length = 2642 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 247 cgttggggttctcgtcgctgaacat 271 ||||||||||||||||||||||||| Sbjct: 2143 cgttggggttctcgtcgctgaacat 2119
>ref|NM_102147.2| Arabidopsis thaliana metal ion binding AT1G22990 mRNA, complete cds Length = 672 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 515 tcacataacggtgcaggcgttagggttctcgtcgct 480
>gb|AC137748.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0076A09, complete sequence Length = 157010 Score = 48.1 bits (24), Expect = 0.025 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 241 agcaggcgttgggg-ttctcgtcgctgaacat 271 |||||||||||||| ||||||||||||||||| Sbjct: 94075 agcaggcgttgggggttctcgtcgctgaacat 94044
>gb|AY072474.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 491 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 459 tcacataacggtgcaggcgttagggttctcgtcgct 424
>gb|AF446887.1|AF446887 Arabidopsis thaliana At1g22990/F19G10_22 mRNA, complete cds Length = 459 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 459 tcacataacggtgcaggcgttagggttctcgtcgct 424
>gb|AY052659.1| Arabidopsis thaliana At1g22990/F19G10_22 mRNA, complete cds Length = 598 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 515 tcacataacggtgcaggcgttagggttctcgtcgct 480
>gb|AF370526.1|AF370526 Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 598 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 515 tcacataacggtgcaggcgttagggttctcgtcgct 480
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.025 Identities = 31/32 (96%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 241 agcaggcgttgggg-ttctcgtcgctgaacat 271 |||||||||||||| ||||||||||||||||| Sbjct: 15065325 agcaggcgttgggggttctcgtcgctgaacat 15065294 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 ||||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 2857748 ctcacatgacgctgcatgcgttggcgttctcctcgctgaacat 2857706 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 23333512 ggcggcgccgccgccgcgccg 23333532 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 25091289 cggcggcgccgccgccgcgc 25091308
>gb|U64910.1|ATU64910 Arabidopsis thaliana farnesylated protein ATFP7 mRNA, partial cds Length = 498 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 340 tcacataacggtgcaggcgttagggttctcgtcgct 305
>gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, complete sequence Length = 92948 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| ||||||||| |||||||||||||| Sbjct: 30996 tcacataacggtgcaggcgttagggttctcgtcgct 31031
>ref|XM_467436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 750 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Minus Query: 242 gcaggcgttggggttctcgtcgctgaa 268 |||||||||||||||||| |||||||| Sbjct: 738 gcaggcgttggggttctcctcgctgaa 712
>ref|XM_472294.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 1156 acatgacagagcaggcattcgggttttcgtcgctgaagatctg 1114
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 ||||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 52359 ctcacatgacgctgcatgcgttggcgttctcctcgctgaacat 52317
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 344 gttcggcggcgccgccgccgcgc 366 ||||||||||||||||||||||| Sbjct: 2506994 gttcggcggcgccgccgccgcgc 2507016 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gcggcgagcctgggcttggcg 202 ||||||||||||||||||||| Sbjct: 2598287 gcggcgagcctgggcttggcg 2598307
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 344 gttcggcggcgccgccgccgcgc 366 ||||||||||||||||||||||| Sbjct: 687018 gttcggcggcgccgccgccgcgc 687040 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gcggcgagcctgggcttggcg 202 ||||||||||||||||||||| Sbjct: 778329 gcggcgagcctgggcttggcg 778349
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Plus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 ||||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 9537 ctcacatgacgctgcatgcgttggcgttctcctcgctgaacat 9579
>emb|AJ577719.1|HVU577719 Hordeum vulgare subsp. vulgare TAM marker, clone SNP206 Length = 198 Score = 46.1 bits (23), Expect = 0.097 Identities = 26/27 (96%) Strand = Plus / Plus Query: 242 gcaggcgttggggttctcgtcgctgaa 268 |||||||||||||||||| |||||||| Sbjct: 167 gcaggcgttggggttctcctcgctgaa 193
>gb|AY108718.1| Zea mays PCO111663 mRNA sequence Length = 435 Score = 46.1 bits (23), Expect = 0.097 Identities = 32/35 (91%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcg 263 ||||||||||| ||||| |||||||||||||||| Sbjct: 252 ctcacatgacgctgcaggagttggggttctcgtcg 218
>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21, complete sequence Length = 151936 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacatctg 274 ||||||| |||||||| || ||||| ||||||||||| ||||| Sbjct: 136362 acatgacagagcaggcattcgggttttcgtcgctgaagatctg 136320
>ref|XM_493922.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1107 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||||||| ||| ||||||| |||||| ||||||||||| Sbjct: 1107 tcacatgacgctgcatgcgttggcgttctcctcgctgaacat 1066
>ref|XM_470239.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 720 cggcggcgccgccgccgcgccg 741
>ref|XM_472252.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1806 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 329 cggcggcgccgccgccgcgccg 350
>ref|XM_854279.1| PREDICTED: Canis familiaris hypothetical protein LOC607758 (LOC607758), mRNA Length = 816 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 342 gggttcggcggcgccgccgccg 363 |||||||||||||||||||||| Sbjct: 356 gggttcggcggcgccgccgccg 335
>emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084N21, complete sequence Length = 143093 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 7055 cggcggcgccgccgccgcgccg 7076
>emb|AJ549119.1|HVU549119 Hordeum vulgare subsp. vulgare mRNA for farnesylated protein 3 (fp3 gene) Length = 650 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgctgaacat 271 ||||||||||| |||||||||| || ||||||| ||||||| Sbjct: 456 tcacatgacggtgcaggcgttgacgtcctcgtcgttgaacat 415
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 140308 cggcggcgccgccgccgcgccg 140329
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 98242 cggcggcgccgccgccgcgccg 98221
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgccg 368 |||||||||||||||||||||| Sbjct: 86461 cggcggcgccgccgccgcgccg 86482
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 194 ggcttggcgtcgtgctcgtcgc 215 |||||||||||||||||||||| Sbjct: 90168 ggcttggcgtcgtgctcgtcgc 90189
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcgc 366 ||||||||||||||||||||| Sbjct: 1132487 tcggcggcgccgccgccgcgc 1132467
>ref|XM_475415.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 221 ggcggcgccgccgccgcgccg 241
>ref|XM_470034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gcggcgccgccgccgcgccgt 369 ||||||||||||||||||||| Sbjct: 392 gcggcgccgccgccgcgccgt 412
>ref|NM_185138.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1482 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 1381 cggcggcgccgccgccgcgcc 1361
>ref|XM_467845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 814 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 239 cggcggcgccgccgccgcgcc 259
>ref|XM_506977.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.25 mRNA Length = 819 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 244 cggcggcgccgccgccgcgcc 264
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 149606 cggcggcgccgccgccgcgcc 149586
>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0040B10 map R2918, complete sequence Length = 149132 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 25750 cggcggcgccgccgccgcgcc 25730
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 19048 ggcggcgccgccgccgcgccg 19068
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctgaacat 271 |||||| | ||||||||| |||||||||||||| Sbjct: 83251 ggagcaagagttggggttatcgtcgctgaacat 83219
>gb|AY184797.1| Chlamydomonas reinhardtii cytosolic thioredoxin h2 (TRXh2) mRNA, complete cds Length = 1181 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 621 ggcggcgccgccgccgcgccg 641
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 gcggcgccgccgccgcgccgt 369 ||||||||||||||||||||| Sbjct: 46462 gcggcgccgccgccgcgccgt 46442
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 78090 cggcggcgccgccgccgcgcc 78070
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 gcggcgagcctgggcttggcg 202 ||||||||||||||||||||| Sbjct: 509112 gcggcgagcctgggcttggcg 509132
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 20795861 ggcggcgccgccgccgcgccg 20795881 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 2467191 cggcggcgccgccgccgcgcc 2467171 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 2195213 ctcacatcaccgagcagctgtttgggttctcgtcgctgaa 2195174
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctgaacat 271 |||||| | ||||||||| |||||||||||||| Sbjct: 26281602 ggagcaagagttggggttatcgtcgctgaacat 26281570 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 2373607 cggcggcgccgccgccgcgcc 2373587 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 18966709 ttcggcggcgccgccgccgc 18966690 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cggcgccgccgccgcgccgt 369 |||||||||||||||||||| Sbjct: 18857005 cggcgccgccgccgcgccgt 18856986 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 18444786 ttcggcggcgccgccgccgc 18444767 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 2153461 ctcacatcaccgagcagctgttcgggttctcgtcgctgaa 2153422
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1267B06 Length = 156989 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 38123 cggcggcgccgccgccgcgcc 38103
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 11094 cggcggcgccgccgccgcgcc 11114
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 95083 cggcggcgccgccgccgcgcc 95103
>dbj|AK121566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034N15, full insert sequence Length = 1676 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 1435 cggcggcgccgccgccgcgcc 1415
>dbj|AK108641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A05, full insert sequence Length = 1532 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 1244 ggcggcgccgccgccgcgccg 1224
>dbj|AK106404.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-G11, full insert sequence Length = 1871 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 1524 cggcggcgccgccgccgcgcc 1544
>dbj|AK103542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132D03, full insert sequence Length = 819 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 244 cggcggcgccgccgccgcgcc 264
>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full insert sequence Length = 1100 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gcggcgccgccgccgcgccgt 369 ||||||||||||||||||||| Sbjct: 629 gcggcgccgccgccgcgccgt 649
>dbj|AK064287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-H01, full insert sequence Length = 1772 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 1560 cggcggcgccgccgccgcgcc 1580
>dbj|AK063312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-G04, full insert sequence Length = 1446 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 935 cggcggcgccgccgccgcgcc 915
>dbj|AK062661.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-F05, full insert sequence Length = 814 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 239 cggcggcgccgccgccgcgcc 259
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 239 ggagcaggcgttggggttctcgtcgctgaacat 271 |||||| | ||||||||| |||||||||||||| Sbjct: 26595860 ggagcaagagttggggttatcgtcgctgaacat 26595828 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 2381389 cggcggcgccgccgccgcgcc 2381369 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 19125358 ttcggcggcgccgccgccgc 19125339 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cggcgccgccgccgcgccgt 369 |||||||||||||||||||| Sbjct: 19017849 cggcgccgccgccgcgccgt 19017830 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 18604187 ttcggcggcgccgccgccgc 18604168 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 2161242 ctcacatcaccgagcagctgttcgggttctcgtcgctgaa 2161203
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 20722075 ggcggcgccgccgccgcgccg 20722095 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 2467135 cggcggcgccgccgccgcgcc 2467115 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 2195157 ctcacatcaccgagcagctgtttgggttctcgtcgctgaa 2195118
>emb|AL928755.5|CNS08CBS Oryza sativa chromosome 12, . BAC OSJNBb0050K10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122901 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgcc 367 ||||||||||||||||||||| Sbjct: 76301 cggcggcgccgccgccgcgcc 76321
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ggcggcgccgccgccgcgccg 368 ||||||||||||||||||||| Sbjct: 93702 ggcggcgccgccgccgcgccg 93722
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgcgccg 368 ||||||||||| |||||||||||| Sbjct: 1254088 ttcggcggcgctgccgccgcgccg 1254111
>ref|XM_475687.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 1351 cggcggcgccgccgccgcgc 1332
>ref|NM_193341.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 708 cggcggcgccgccgccgcgc 689
>ref|NM_193727.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||| |||||||| || | |||||||||||||||||| Sbjct: 454 acatgatggagcaggagtcgacgttctcgtcgctgaacat 415
>ref|NM_187669.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 272 tcggcggcgccgccgccgcg 291
>ref|XM_479246.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 230 tcggcggcgccgccgccgcg 249
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 99589 ttcggcggcgccgccgccgc 99570
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cttggcgtcgtgctcgtcgc 215 |||||||||||||||||||| Sbjct: 127452 cttggcgtcgtgctcgtcgc 127471
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cggcgccgccgccgcgccgt 369 |||||||||||||||||||| Sbjct: 123043 cggcgccgccgccgcgccgt 123024
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 24101 ttcggcggcgccgccgccgc 24082
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 33944 cggcggcgccgccgccgcgc 33963
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cttggcgtcgtgctcgtcgc 215 |||||||||||||||||||| Sbjct: 336395 cttggcgtcgtgctcgtcgc 336414
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 69907 ttcggcggcgccgccgccgc 69888
>emb|Z98258.1|HS444G9 Human DNA sequence from clone LA16c-444G9 on chromosome 16, complete sequence Length = 28835 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ggtagaagccagggttcggc 350 |||||||||||||||||||| Sbjct: 826 ggtagaagccagggttcggc 807
>gb|AC046136.12| Homo sapiens 3 BAC RP11-190P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155827 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 atttacatgtctgctaattc 84 |||||||||||||||||||| Sbjct: 13199 atttacatgtctgctaattc 13218
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cttggcgtcgtgctcgtcgc 215 |||||||||||||||||||| Sbjct: 111088 cttggcgtcgtgctcgtcgc 111107
>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 Length = 256073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ggtagaagccagggttcggc 350 |||||||||||||||||||| Sbjct: 191393 ggtagaagccagggttcggc 191374
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 87790 cggcggcgccgccgccgcgc 87771
>dbj|AK057053.1| Homo sapiens cDNA FLJ32491 fis, clone SKNSH1000308 Length = 2036 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ggtagaagccagggttcggc 350 |||||||||||||||||||| Sbjct: 1542 ggtagaagccagggttcggc 1523
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 tcggcggcgccgccgccgcgccgt 369 ||||| |||||||||||||||||| Sbjct: 102172 tcggccgcgccgccgccgcgccgt 102195
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 26272834 tcggcggcgccgccgccgcg 26272815
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 20276482 cggcggcgccgccgccgcgc 20276463 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||| |||||||| || | |||||||||||||||||| Sbjct: 17737939 acatgatggagcaggagtcgacgttctcgtcgctgaacat 17737900
>gb|DQ019837.1| Burkholderia pseudomallei clone BPtf0001 putative AraC/XylS family transcription factor gene, partial cds Length = 839 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cttggcgtcgtgctcgtcgc 215 |||||||||||||||||||| Sbjct: 589 cttggcgtcgtgctcgtcgc 608
>emb|BX818292.1|CNS0AE86 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 646 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 230 tcacatgacggagcaggcgttggggttctcgtcgct 265 |||||| |||| |||||| || |||||||||||||| Sbjct: 493 tcacataacggtgcaggctttagggttctcgtcgct 458
>dbj|AP004232.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0051H17 Length = 187471 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 182860 cggcggcgccgccgccgcgc 182841
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cggcggcgccgccgccgcgc 366 |||||||||||||||||||| Sbjct: 42515 cggcggcgccgccgccgcgc 42496
>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455H11 Length = 101607 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 47462 tcggcggcgccgccgccgcg 47443
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||| |||||||| || | |||||||||||||||||| Sbjct: 119474 acatgatggagcaggagtcgacgttctcgtcgctgaacat 119435
>gb|AC008545.3|AC008545 Homo sapiens chromosome 5 clone CTC-500L4, complete sequence Length = 90493 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 agcctgggcttggcgtcgtg 207 |||||||||||||||||||| Sbjct: 9373 agcctgggcttggcgtcgtg 9392
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 16420 ttcggcggcgccgccgccgc 16401
>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0690H04 Length = 137319 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 98670 ttcggcggcgccgccgccgc 98651
>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0414C05 Length = 123105 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 106993 ttcggcggcgccgccgccgc 106974
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 69695 ttcggcggcgccgccgccgc 69714
>dbj|AP005533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0018M09 Length = 157377 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 120574 ttcggcggcgccgccgccgc 120593
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 42365 ttcggcggcgccgccgccgc 42384
>dbj|AK121700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073F21, full insert sequence Length = 2324 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 1875 ctcacatcaccgagcagctgttcgggttctcgtcgctgaa 1836
>dbj|AK109879.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-C09, full insert sequence Length = 1431 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 230 tcggcggcgccgccgccgcg 249
>dbj|AK105759.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D05, full insert sequence Length = 2027 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 1592 ctcacatcaccgagcagctgttcgggttctcgtcgctgaa 1553
>dbj|AK100890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130A16, full insert sequence Length = 1469 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 cggcgccgccgccgcgccgt 369 |||||||||||||||||||| Sbjct: 591 cggcgccgccgccgcgccgt 572
>dbj|AK064240.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-B01, full insert sequence Length = 1582 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ttcggcggcgccgccgccgc 364 |||||||||||||||||||| Sbjct: 461 ttcggcggcgccgccgccgc 442
>dbj|AK060145.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A06, full insert sequence Length = 1027 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 232 acatgacggagcaggcgttggggttctcgtcgctgaacat 271 |||||| |||||||| || | |||||||||||||||||| Sbjct: 603 acatgatggagcaggagtcgacgttctcgtcgctgaacat 564
>dbj|AK058578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F04, full insert sequence Length = 1249 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 369 tcggcggcgccgccgccgcg 388
>emb|AL360260.1|IRO043465 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 43465 Length = 1411 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 ggtagaagccagggttcggc 350 |||||||||||||||||||| Sbjct: 901 ggtagaagccagggttcggc 882
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 gttcggcggcgccgccgccg 363 |||||||||||||||||||| Sbjct: 1183848 gttcggcggcgccgccgccg 1183867
>dbj|AB028180.1| Oryza sativa mRNA for OsNAC1 protein, complete cds Length = 1294 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ggcggcgccgccgccgcgcc 367 |||||||||||||||||||| Sbjct: 828 ggcggcgccgccgccgcgcc 809
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 ttcggcggcgccgccgccgcgccg 368 ||||||| |||||||||||||||| Sbjct: 4702139 ttcggcgccgccgccgccgcgccg 4702162
>emb|AL928756.4|CNS08CBT Oryza sativa chromosome 12, . BAC OSJNBb0077O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132703 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 77437 ctcacatcaccgagcagctgtttgggttctcgtcgctgaa 77398
>emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC OSJNBa0039D03 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 125593 Score = 40.1 bits (20), Expect = 6.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 229 ctcacatgacggagcaggcgttggggttctcgtcgctgaa 268 ||||||| || |||||| ||| ||||||||||||||||| Sbjct: 50155 ctcacatcaccgagcagctgttcgggttctcgtcgctgaa 50116
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tcggcggcgccgccgccgcg 365 |||||||||||||||||||| Sbjct: 40285 tcggcggcgccgccgccgcg 40266 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,663,264 Number of Sequences: 3902068 Number of extensions: 2663264 Number of successful extensions: 71091 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 185 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64365 Number of HSP's gapped (non-prelim): 6682 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
