ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57g10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chro... 54 4e-04
2emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chr... 54 4e-04
3ref|NM_197444.1| Oryza sativa (japonica cultivar-group) putative... 46 0.096
4emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N2... 46 0.096
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.096
6gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen... 46 0.096
7dbj|AK063104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.096
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.096
9gb|AC166820.2| Mus musculus BAC clone RP24-287O2 from chromosome... 44 0.38
10gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosom... 44 0.38
11gb|AF244687.1|AF244687 Zea mays glutathione S-transferase GST 22... 44 0.38
12gb|AY104131.1| Zea mays PCO099552 mRNA sequence 44 0.38
13gb|AC183544.3| Pan troglodytes BAC clone CH251-284N17 from chrom... 42 1.5
14emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on chrom... 42 1.5
15emb|AL360233.21| Human DNA sequence from clone RP11-198D23 on ch... 42 1.5
16gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, comp... 42 1.5
17gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, comple... 42 1.5
18gb|AC126456.3| Homo sapiens BAC clone RP11-304P11 from 2, comple... 42 1.5
19gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.9
20gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome... 40 5.9
21gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosom... 40 5.9
22gb|AC132333.3| Mus musculus BAC clone RP24-226I7 from chromosome... 40 5.9
23gb|AC140191.2| Mus musculus BAC clone RP24-375E1 from chromosome... 40 5.9
24gb|AC125314.3| Mus musculus BAC clone RP24-361P7 from chromosome... 40 5.9
25gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome... 40 5.9
26emb|Z92844.3|HS435C23 Human DNA sequence from clone RP3-435C23 o... 40 5.9
27emb|AL512442.10| Human DNA sequence from clone RP11-105A24 on ch... 40 5.9
28emb|AL360015.25| Human DNA sequence from clone RP11-344F20 on ch... 40 5.9
29emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M1... 40 5.9
30emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, B... 40 5.9
31emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.9
32gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, co... 40 5.9
33gb|AC026726.7| Homo sapiens chromosome 5 clone CTD-2249K22, comp... 40 5.9
34gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome... 40 5.9
35dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
36gb|AF244699.1|AF244699 Zea mays glutathione S-transferase GST 34... 40 5.9
37gb|AY064480.1| Triticum aestivum glutathione-S-transferase Cla47... 40 5.9
38dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
39dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
40gb|AC148982.4| Mus musculus BAC clone RP23-174I22 from 1, comple... 40 5.9
41gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, comple... 40 5.9 
>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete
              sequence
          Length = 176004

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 2      caaaaaggaaactaaaaatcaatttat 28
              |||||||||||||||||||||||||||
Sbjct: 153809 caaaaaggaaactaaaaatcaatttat 153835
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>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete
             sequence
          Length = 200480

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 2     caaaaaggaaactaaaaatcaatttat 28
             |||||||||||||||||||||||||||
Sbjct: 60634 caaaaaggaaactaaaaatcaatttat 60608
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>ref|NM_197444.1| Oryza sativa (japonica cultivar-group) putative glutathione
           S-transferase (OSJNBb0005J14.23), mRNA
          Length = 768

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 374 caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgcggccagct 433
           ||||||| ||| || |||| ||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 697 caggcatggcgtccaccacggccggatgcgcgcagaagcgatccgcccaagcagccaggt 638

                  
Query: 434 taggaac 440
           | |||||
Sbjct: 637 ttggaac 631
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>emb|AL035686.15|HS965N20 Human DNA sequence from clone RP5-965N20 on chromosome 20q13.13-13.2
              Contains ESTs, STSs and GSSs, complete sequence
          Length = 127197

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 2      caaaaaggaaactaaaaatcaatttat 28
              ||||||||||||||||||| |||||||
Sbjct: 106041 caaaaaggaaactaaaaattaatttat 106067
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 374      caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgcggccagct 433
                ||||||| ||| || |||| ||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 19915637 caggcatggcgtccaccacggccggatgcgcgcagaagcgatccgcccaagcagccaggt 19915696

                       
Query: 434      taggaac 440
                | |||||
Sbjct: 19915697 ttggaac 19915703
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>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                         
Query: 374   caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgcggccagct 433
             ||||||| ||| || |||| ||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 70406 caggcatggcgtccaccacggccggatgcgcgcagaagcgatccgcccaagcagccaggt 70347

                    
Query: 434   taggaac 440
             | |||||
Sbjct: 70346 ttggaac 70340
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>dbj|AK063104.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C12, full
           insert sequence
          Length = 881

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 374 caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgcggccagct 433
           ||||||| ||| || |||| ||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 724 caggcatggcgtccaccacggccggatgcgcgcagaagcgatccgcccaagcagccaggt 665

                  
Query: 434 taggaac 440
           | |||||
Sbjct: 664 ttggaac 658
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 374      caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgcggccagct 433
                ||||||| ||| || |||| ||||| || |||||||| ||||||||||| || ||||| |
Sbjct: 19926913 caggcatggcgtccaccacggccggatgcgcgcagaagcgatccgcccaagcagccaggt 19926972

                       
Query: 434      taggaac 440
                | |||||
Sbjct: 19926973 ttggaac 19926979
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>gb|AC166820.2| Mus musculus BAC clone RP24-287O2 from chromosome 15, complete sequence
          Length = 137033

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 2     caaaaaggaaactaaaaatcaa 23
             ||||||||||||||||||||||
Sbjct: 57626 caaaaaggaaactaaaaatcaa 57605
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>gb|AC157521.2| Mus musculus BAC clone RP23-103M13 from chromosome 15, complete
            sequence
          Length = 194306

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 2    caaaaaggaaactaaaaatcaa 23
            ||||||||||||||||||||||
Sbjct: 8628 caaaaaggaaactaaaaatcaa 8607
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>gb|AF244687.1|AF244687 Zea mays glutathione S-transferase GST 22 mRNA, partial cds
          Length = 803

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 403 gcgcagaaccgatccgcccacgcggccagc 432
           ||||||||||| ||||||||||| ||||||
Sbjct: 590 gcgcagaaccgctccgcccacgccgccagc 561
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>gb|AY104131.1| Zea mays PCO099552 mRNA sequence
          Length = 831

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 403 gcgcagaaccgatccgcccacgcggccagc 432
           ||||||||||| ||||||||||| ||||||
Sbjct: 628 gcgcagaaccgctccgcccacgccgccagc 599
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>gb|AC183544.3| Pan troglodytes BAC clone CH251-284N17 from chromosome x, complete
             sequence
          Length = 161059

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2     caaaaaggaaactaaaaatcaattt 26
             |||||||| ||||||||||||||||
Sbjct: 64855 caaaaagggaactaaaaatcaattt 64831
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>emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on chromosome 6 Contains the 3'
             end of a novel gene, complete sequence
          Length = 55224

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    gtactttggaacaattcctac 49
             |||||||||||||||||||||
Sbjct: 40757 gtactttggaacaattcctac 40737
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>emb|AL360233.21| Human DNA sequence from clone RP11-198D23 on chromosome 10 Contains part
              of the PARD3 gene for par-3 partitioning defective 3
              homolog (C.elegans) and a transcription elongation factor
              B(SIII) (TCEB2) pseudogene, complete sequence
          Length = 109816

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 2      caaaaaggaaactaaaaatcaattt 26
              |||||||| ||||||||||||||||
Sbjct: 105310 caaaaagggaactaaaaatcaattt 105334
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>gb|AC079071.9| Homo sapiens chromosome 8, clone RP11-43G18, complete sequence
          Length = 157811

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 148    tatttctaataacagtattga 168
              |||||||||||||||||||||
Sbjct: 141851 tatttctaataacagtattga 141871
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>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence
          Length = 166731

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     aaaaaggaaactaaaaatcaa 23
             |||||||||||||||||||||
Sbjct: 77929 aaaaaggaaactaaaaatcaa 77949
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>gb|AC126456.3| Homo sapiens BAC clone RP11-304P11 from 2, complete sequence
          Length = 117907

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     aaaaaggaaactaaaaatcaa 23
             |||||||||||||||||||||
Sbjct: 11344 aaaaaggaaactaaaaatcaa 11364
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 376     ggcatcgcgcccgccaccgc 395
               ||||||||||||||||||||
Sbjct: 3949297 ggcatcgcgcccgccaccgc 3949316
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>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence
          Length = 155751

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 61     taattacgtagctgcaaagtagta 84
              ||||||| ||||||||||||||||
Sbjct: 109867 taattacttagctgcaaagtagta 109844
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>gb|AC132331.3| Mus musculus BAC clone RP24-217D10 from chromosome 12, complete sequence
          Length = 176940

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ataattacgtagctgcaaag 79
              ||||||||||||||||||||
Sbjct: 153468 ataattacgtagctgcaaag 153487
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>gb|AC132333.3| Mus musculus BAC clone RP24-226I7 from chromosome 7, complete sequence
          Length = 170540

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaaaggaaactaaaaatcaa 23
             ||||||||||||||||||||
Sbjct: 38161 aaaaggaaactaaaaatcaa 38180
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>gb|AC140191.2| Mus musculus BAC clone RP24-375E1 from chromosome 7, complete sequence
          Length = 164310

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      aaaaggaaactaaaaatcaa 23
              ||||||||||||||||||||
Sbjct: 134764 aaaaggaaactaaaaatcaa 134783
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>gb|AC125314.3| Mus musculus BAC clone RP24-361P7 from chromosome 1, complete sequence
          Length = 121141

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aatttatgtactttggaaca 41
             ||||||||||||||||||||
Sbjct: 12456 aatttatgtactttggaaca 12475
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>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence
          Length = 223306

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    tgcaaagtagtagaggccag 92
             ||||||||||||||||||||
Sbjct: 59719 tgcaaagtagtagaggccag 59738
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>emb|Z92844.3|HS435C23 Human DNA sequence from clone RP3-435C23 on chromosome Xp21-22,
             complete sequence
          Length = 158849

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     aaaaaggaaactaaaaatca 22
             ||||||||||||||||||||
Sbjct: 41589 aaaaaggaaactaaaaatca 41570
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>emb|AL512442.10| Human DNA sequence from clone RP11-105A24 on chromosome 13 Contains a
             polymerase (RNA) III (DNA directed) polypeptide K (POLR3K)
             pseudogene, complete sequence
          Length = 113884

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaaaggaaactaaaaatca 22
             ||||||||||||||||||||
Sbjct: 87663 aaaaaggaaactaaaaatca 87682
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>emb|AL360015.25| Human DNA sequence from clone RP11-344F20 on chromosome 6 Contains a
              CGI-35 pseudogene, complete sequence
          Length = 153072

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     cacaaataattacgtagctg 74
              ||||||||||||||||||||
Sbjct: 102809 cacaaataattacgtagctg 102828
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>emb|AL021395.16|HS269M15 Human DNA sequence from clone RP1-269M15 on chromosome 20q12-13.12
             Contains the PPIAL gene for peptidylprolyl isomerase A
             (cyclophilin A)-like pseudogene, the 5' end of the PTPRT
             gene for protein tyrosine phosphatase receptor type T, a
             novel gene and two CpG Islands, complete sequence
          Length = 177562

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaaaggaaactaaaaatca 22
             ||||||||||||||||||||
Sbjct: 15715 aaaaaggaaactaaaaatca 15734
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>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17
          Length = 109016

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     aatcaatttatgtactttgg 37
              ||||||||||||||||||||
Sbjct: 104918 aatcaatttatgtactttgg 104937
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>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24
          Length = 105306

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   aatcaatttatgtactttgg 37
            ||||||||||||||||||||
Sbjct: 8081 aatcaatttatgtactttgg 8100
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>gb|AC023983.11| Homo sapiens chromosome 18, clone RP11-621L6, complete sequence
          Length = 190225

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aaactaaaaatcaatttatg 29
             ||||||||||||||||||||
Sbjct: 70055 aaactaaaaatcaatttatg 70074
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>gb|AC026726.7| Homo sapiens chromosome 5 clone CTD-2249K22, complete sequence
          Length = 156825

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   cagccagcaggctacttatt 255
             ||||||||||||||||||||
Sbjct: 65154 cagccagcaggctacttatt 65135
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>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence
          Length = 243976

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     aactaaaaatcaatttatgt 30
              ||||||||||||||||||||
Sbjct: 149412 aactaaaaatcaatttatgt 149393
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 11       aactaaaaatcaatttatgt 30
                ||||||||||||||||||||
Sbjct: 27962361 aactaaaaatcaatttatgt 27962380
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>gb|AF244699.1|AF244699 Zea mays glutathione S-transferase GST 34 mRNA, complete cds
          Length = 900

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                               
Query: 374 caggcatcgcgcccgccaccgccgggtgggcgcagaaccgatccgcccacgc 425
           |||| |||||| || |||| |||||||||||||| | ||| || ||||||||
Sbjct: 655 cagggatcgcgtccaccacggccgggtgggcgcacagccggtcagcccacgc 604
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>gb|AY064480.1| Triticum aestivum glutathione-S-transferase Cla47 mRNA, complete
           cds
          Length = 901

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 gaaccgatccgcccacgcggccag 431
           |||||| |||||||||||||||||
Sbjct: 652 gaaccgctccgcccacgcggccag 629
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>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0453E03
          Length = 159980

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 11     aactaaaaatcaatttatgt 30
              ||||||||||||||||||||
Sbjct: 125719 aactaaaaatcaatttatgt 125738
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    aactaaaaatcaatttatgt 30
             ||||||||||||||||||||
Sbjct: 51695 aactaaaaatcaatttatgt 51714
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>gb|AC148982.4| Mus musculus BAC clone RP23-174I22 from 1, complete sequence
          Length = 195580

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     aatttatgtactttggaaca 41
              ||||||||||||||||||||
Sbjct: 124302 aatttatgtactttggaaca 124283
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>gb|AC132482.4| Mus musculus BAC clone RP23-27C11 from 12, complete sequence
          Length = 175487

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ataattacgtagctgcaaag 79
             ||||||||||||||||||||
Sbjct: 13609 ataattacgtagctgcaaag 13628


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,130,407
Number of Sequences: 3902068
Number of extensions: 3130407
Number of successful extensions: 62595
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62435
Number of HSP's gapped (non-prelim): 160
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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