ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart57g09 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 137 bits (344), Expect = 2e-32 Identities = 68/91 (74%), Positives = 72/91 (79%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 TNKIVDFIKFD VIKNREKHKG+FETIHVED+ GHQFATR+GNV Sbjct: 166 TNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 202 FTIGKG KPWVSLPKGKGIKL+IIEEQRKRD Sbjct: 226 FTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 132 bits (331), Expect = 6e-31 Identities = 65/90 (72%), Positives = 70/90 (77%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 TNKI DFIKFD VIKNREKHKG+FETIHV+DA GH+FATRLGNV Sbjct: 162 TNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRLGNV 221 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 FTIGKGTKPWVSLPKGKGIKLTI+EE +KR Sbjct: 222 FTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 132 bits (331), Expect = 6e-31 Identities = 63/90 (70%), Positives = 72/90 (80%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 +NKIVDFIKFD VIKNREKHKG+FET+H++D+QGH+FATRLGNV Sbjct: 166 SNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 FT+GKGTKPWVSLPKGKGIKLTIIE+ RKR Sbjct: 226 FTLGKGTKPWVSLPKGKGIKLTIIEDARKR 255
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 129 bits (324), Expect = 4e-30 Identities = 65/90 (72%), Positives = 70/90 (77%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 +NKIVDFIKFD VIKNREKHKG+FETIHV+DA GH+FATRLGNV Sbjct: 166 SNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 FTIGKGTKPWVSLPK KGIKL+IIEE RKR Sbjct: 226 FTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 129 bits (324), Expect = 4e-30 Identities = 63/89 (70%), Positives = 70/89 (78%) Frame = -2 Query: 471 NKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNVF 292 NKIV+FIKFD VIKNREKHKG+FETIH++D+ GH+FATRLGNV+ Sbjct: 167 NKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVY 226 Query: 291 TIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 TIGKGTKPWVSLPKGKGIKLTIIEE RKR Sbjct: 227 TIGKGTKPWVSLPKGKGIKLTIIEEARKR 255
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 96.7 bits (239), Expect(2) = 1e-26 Identities = 45/49 (91%), Positives = 47/49 (95%) Frame = -2 Query: 366 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 220 KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253 Score = 42.4 bits (98), Expect(2) = 1e-26 Identities = 20/39 (51%), Positives = 25/39 (64%) Frame = -1 Query: 475 DQQDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 359 DQQ+ LHQ HGDW ++ A WCDQ+QGEA G+ Sbjct: 170 DQQELRLHQGLMLAMCHGDW-RRNTAVWCDQQQGEAKGS 207
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 107 bits (267), Expect = 2e-23 Identities = 51/90 (56%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NREKH G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 107 bits (267), Expect = 2e-23 Identities = 51/90 (56%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NREKH G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNNFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 106 bits (264), Expect = 3e-23 Identities = 50/90 (55%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 103 bits (257), Expect = 2e-22 Identities = 49/90 (54%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI DFIKF+ VI NREKH G+F+ +HV+D+ G+ FATRL N+ Sbjct: 165 TGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSFDVVHVKDSIGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KPWVSLP+GKG++LTI EE+ KR Sbjct: 225 FVIGKGNKPWVSLPRGKGVRLTIAEERDKR 254
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 102 bits (255), Expect = 4e-22 Identities = 47/90 (52%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI++FIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 102 bits (254), Expect = 5e-22 Identities = 47/90 (52%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI++FIKFD VI NRE+H G+F+ +HV+DA G+ FATR+ N+ Sbjct: 165 TGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 102 bits (253), Expect = 7e-22 Identities = 46/90 (51%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI++FIKFD VI NRE+H G+F+ +HV+DA G+ FATR+ N+ Sbjct: 165 TGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 100 bits (250), Expect = 1e-21 Identities = 46/90 (51%), Positives = 61/90 (67%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 + KI D+IKFD + NRE+H G+F+ +H++D+QGH FATRL NV Sbjct: 166 SGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG KP++SLPKGKG+KL+I EE+ KR Sbjct: 226 FIIGKGNKPYISLPKGKGVKLSIAEERDKR 255
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 100 bits (249), Expect = 2e-21 Identities = 46/90 (51%), Positives = 60/90 (66%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI++FIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 100 bits (249), Expect = 2e-21 Identities = 46/90 (51%), Positives = 60/90 (66%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI++FIKFD VI NRE+H G+F+ +HV+DA G+ FATRL N+ Sbjct: 165 TGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 99.8 bits (247), Expect = 3e-21 Identities = 47/90 (52%), Positives = 60/90 (66%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI +FIKFD VI NRE+H G+F+ +HV+D+ G+ FATRL N+ Sbjct: 165 TGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG K WVS+P+GKGI+LTI EE+ KR Sbjct: 225 FVIGKGNKAWVSIPRGKGIRLTIAEERDKR 254
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 99.4 bits (246), Expect = 4e-21 Identities = 46/90 (51%), Positives = 59/90 (65%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 + KI FIKFD VI NRE+H G+F+ +HV+DA G+ FATR+ N+ Sbjct: 165 SGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGNSFATRISNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 98.2 bits (243), Expect = 9e-21 Identities = 46/90 (51%), Positives = 58/90 (64%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI FIKFD VI NRE+H G+ + +HV+DA G+ FATR+ N+ Sbjct: 165 TGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 97.4 bits (241), Expect = 2e-20 Identities = 45/90 (50%), Positives = 58/90 (64%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI FIKFD V+ NRE+H G+ + +HV+DA G+ FATR+ N+ Sbjct: 165 TGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNI 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 225 FVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 92.8 bits (229), Expect = 4e-19 Identities = 46/90 (51%), Positives = 56/90 (62%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 TNKI FIKFD I +RE H G+FE IHV+DA +FATRL NV Sbjct: 166 TNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 226 FVIGEAGKSWISLPKGKGVKLSITEERDRR 255
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 92.0 bits (227), Expect = 7e-19 Identities = 46/90 (51%), Positives = 56/90 (62%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 TNKI FIKFD I +RE H G+FE IHV+DA +FATRL NV Sbjct: 166 TNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 226 FVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 92.0 bits (227), Expect = 7e-19 Identities = 46/90 (51%), Positives = 56/90 (62%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 TNKI FIKFD I +RE H G+FE IHV+DA +FATRL NV Sbjct: 166 TNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 226 FVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 84.7 bits (208), Expect = 1e-16 Identities = 41/90 (45%), Positives = 55/90 (61%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI F+KF+ I +RE+H+G F+ +H++DA +QF TRL NV Sbjct: 166 TGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNV 225 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG+G K +SLPKGKGIKL+I EE+ R Sbjct: 226 FVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 84.3 bits (207), Expect = 1e-16 Identities = 40/90 (44%), Positives = 56/90 (62%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 + KI DFIKFD I ++E+H G F+ +H++D+ + F TRL NV Sbjct: 165 SGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGFDLVHIKDSLDNTFVTRLNNV 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG+ KP++SLPKGKGIKL+I EE+ +R Sbjct: 225 FVIGEQGKPYISLPKGKGIKLSIAEERDRR 254
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 82.0 bits (201), Expect = 7e-16 Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI FIKFD VI +REK +G F+ +H++DA + F TRL NV Sbjct: 166 TGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGFDLVHIKDALENTFVTRLSNV 225 Query: 294 FTIG-KGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IG + KPWVSLPKGKGIKL+I EE+ +R Sbjct: 226 FVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 78.6 bits (192), Expect = 8e-15 Identities = 40/90 (44%), Positives = 53/90 (58%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 T KI D +KF+ +I +RE+ G + IH++D+ GH FATR+ NV Sbjct: 165 TQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNV 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 205 F IGKG K VSLP G GI+L+I EE+ KR Sbjct: 225 FVIGKGNKALVSLPTGAGIRLSIAEERDKR 254
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 76.6 bits (187), Expect = 3e-14 Identities = 36/87 (41%), Positives = 52/87 (59%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDAQGHQFATRLGNV 295 + KI FI F+ + +REKH G+F+ +HV D GHQFATRL NV Sbjct: 165 SGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSFDIVHVTDTAGHQFATRLSNV 224 Query: 294 FTIGKGTKPWVSLPKGKGIKLTIIEEQ 214 F IGK ++ +VSLP GKG++ + ++E+ Sbjct: 225 FIIGKASQTFVSLPAGKGVRRSRVDER 251
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 331 T KI DFIKFD VI NRE+H G+F+ +HV+DA Sbjct: 147 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/48 (43%), Positives = 26/48 (54%) Frame = -2 Query: 474 TNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 331 T KI DFIKFD VI NRE+H G+F+ +HV+DA Sbjct: 147 TGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDA 194
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 33.5 bits (75), Expect = 0.29 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -2 Query: 387 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 247 +K R++H+G ++I+ D GH+F G+VF + KP +S +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977| Length = 199 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +1 Query: 286 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 375 NG H V + GGKL +G+L D LKGSL +L Sbjct: 36 NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) Length = 565 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -2 Query: 372 KHKGTFETIHVEDAQGHQFATRLGNV 295 KHKGT+ETI E+ GH+ TR+G V Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV| Length = 547 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -2 Query: 363 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 265 GTF T++VE+ G+ +V G G KPW Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +1 Query: 343 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLV 471 ++ LK + L+P D H N +VA T H + D+ D+++N V Sbjct: 72 IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEV 118
>TRPG_CRYNE (Q5KC22) Anthranilate synthase component 2 (EC 4.1.3.27)| (Anthranilate synthase component II) [Includes: Glutamine amidotransferase; Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS); N-(5'-phosphoribosyl)anthranilate isomerase (EC 5.3 Length = 752 Score = 28.5 bits (62), Expect = 9.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Frame = +1 Query: 223 NDGELDTLAL--GEAHPRLGALANGEHVAQTGGKLVTLGILN-----VDGLKGSLMLLPV 381 +DGEL+ + + G HPR + + + +A GKL LG+ VD L G + Sbjct: 46 SDGELERIVISPGPGHPRTDSGVSRDVIAWGMGKLPILGVCMGLECIVDLLGGEIAYAGE 105 Query: 382 LDHTNTPSVAPTSHHDDV 435 + H T V HD + Sbjct: 106 IKHGKTSLV----QHDSI 119
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 28.5 bits (62), Expect = 9.2 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +3 Query: 249 PWGGSPKAWCPCQW*TRCPDGWQTGDPGHPQRGWSQRFPYA 371 PWGG+P P PD W + D G P G P+A Sbjct: 324 PWGGTP---APAAGEGPTPDPWGSSDGGAPVSGPPSSDPWA 361
>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 316 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 456 KL LGI VDG+ L + P LD TP + HHD D+++D+ Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
>MRAW_BACCZ (Q636A8) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 316 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 456 KL LGI VDG+ L + P LD TP + HHD D+++D+ Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
>MRAW_BACC1 (P62468) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 316 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 456 KL LGI VDG+ L + P LD TP + HHD D+++D+ Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129
>MRAW_BACAN (Q81WC3) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 316 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDE 456 KL LGI VDG+ L + P LD TP + HHD D+++D+ Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQ 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,285,151 Number of Sequences: 219361 Number of extensions: 1380239 Number of successful extensions: 3906 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 3747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3875 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
