>GLMU_STRSZ (Q8GQP7) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 460

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = +3

Query: 153 RLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGLDDGVQLGPHA 314
           R+ + S I  GS I D+ L  G V         V +S ++G  L DGV +GP+A
Sbjct: 285 RIGSRSVITNGSYILDSRLGEGVV---------VSQSVIEGSVLADGVTVGPYA 329

>NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            [Contains: Notch 2 extracellular truncation; Notch 2
            intracellular domain]
          Length = 2471

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +2

Query: 2    LQLSCFA*FALQHGADQNHTCLL--FCLSAGRYHYCTC 109
            L +SC A  ALQ G    H C     C++AG  H+C C
Sbjct: 1101 LNVSCKA-AALQKGVPVEHLCQHSGICINAGNTHHCQC 1137

>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch 2)|
            (Motch B) [Contains: Notch 2 extracellular truncation;
            Notch 2 intracellular domain]
          Length = 2470

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +2

Query: 2    LQLSCFA*FALQHGADQNHTCLL--FCLSAGRYHYCTC 109
            L +SC A  ALQ G    H C     C++AG  H+C C
Sbjct: 1099 LNVSCKA-AALQKGVPVEHLCQHSGICINAGNTHHCQC 1135

>GLMU_ANASP (Q8YQB2) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 451

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +3

Query: 129 IIKHQDSIRLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGLDDGVQLGP 308
           II+ Q  +R  T   IQ GS I   +L   S     G + +V  S +    + DG ++GP
Sbjct: 269 IIEPQTHLRGSTV--IQSGSRIGPGSLIENSQ---LGANVTVHYSVVTDSTIQDGTKIGP 323

Query: 309 HALVPLHVVVGLQLAVG 359
           +A +  H  VG    +G
Sbjct: 324 YAHLRGHAQVGANCRIG 340

>DADA1_PSEAE (Q9HTQ0) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)|
          Length = 432

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 135 KHQDSIRLITTSYIQEGSLISDAALWTG 218
           + ++++ +ITT    EG  IS A  WTG
Sbjct: 327 RRRETLEMITTDLYPEGGDISQATFWTG 354

>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)|
          Length = 501

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 13/65 (20%)
 Frame = +2

Query: 38  HGADQNHTC----LLFCLSAGRYHYCT---------CISTLHTHN*ASGLNQIDHNIIHT 178
           H  ++++ C      FC  AG +H+           C+    + N  S L+Q  H  +HT
Sbjct: 347 HSGEKHYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQ--HQGVHT 404

Query: 179 GGEPY 193
           G +PY
Sbjct: 405 GAKPY 409

>ZN235_MOUSE (Q61116) Zinc finger protein 235 (Zinc finger protein 93) (Zfp-93)|
          Length = 645

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 155 IDHNIIHTGGEPY*RRCIMDR*RLNWSWTRSISRSIMPG 271
           +DH  IHTG +PY  RC +   R  WS +    +S+  G
Sbjct: 469 LDHQRIHTGEKPY--RCEVCGKRFPWSLSLHSHQSVHTG 505

>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible|
           leucine zipper protein 4)
          Length = 780

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +3

Query: 231 GAGHDQSVGRSCLDGRGLDDGVQLGPHALVP 323
           GAG  QSV    + G G    V  GPHA+VP
Sbjct: 474 GAGQPQSVPPPQMGGSGPLSAVPGGPHAVVP 504

>ASK2_ARATH (P43292) Serine/threonine-protein kinase ASK2 (EC 2.7.11.1)|
          Length = 353

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 126 RIIKHQDSIRLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGL--DDGVQ 299
           R+++H+D+  L+   YI+ G  I                D++V R  ++ R L   + ++
Sbjct: 19  RLLRHKDTKELVAMKYIERGRKI----------------DENVAREIINHRSLKHPNIIR 62

Query: 300 LGPHALVPLHVVVGLQLAVG 359
                L P H+ + ++ A G
Sbjct: 63  FKEVILTPTHLAIVMEYASG 82

>NU5H_NYCOV (Q5DUY0) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 1849

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 297 GRRHPAHVHPGMIDLLIDRVQL 232
           G RHPA + P MI+ L+D + +
Sbjct: 17  GHRHPADIKPSMINSLLDSMSI 38

>GLMU_STRR6 (Q8DQ18) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 459

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/77 (24%), Positives = 37/77 (48%)
 Frame = +3

Query: 129 IIKHQDSIRLITTSYIQEGSLISDAALWTGSV*IGAGHDQSVGRSCLDGRGLDDGVQLGP 308
           I+K Q  I   T   +  G+ + D+ +  G+V         +  S ++   + DGV +GP
Sbjct: 279 ILKGQTKIGAETV--LTNGTYVVDSTIGAGAV---------ITNSMIEESSVADGVTVGP 327

Query: 309 HALVPLHVVVGLQLAVG 359
           +A +  +  +G Q+ +G
Sbjct: 328 YAHIRPNSSLGAQVHIG 344

>ZFP3_MOUSE (Q8BLB0) Zinc finger protein 3 (Zfp-3)|
          Length = 497

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +2

Query: 89  RYHYCTCISTLHTHN*ASGLNQIDHNIIHTGGEPY 193
           RYH C+       H+  SGL  I H  IHTG +PY
Sbjct: 274 RYHECSECGKAFKHS--SGL--IRHQKIHTGEKPY 304


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,541,165
Number of Sequences: 219361
Number of extensions: 904305
Number of successful extensions: 4285
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4281
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)