ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 51 7e-07
2OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 49 3e-06
3OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (... 49 5e-06
4OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 47 1e-05
5OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42... 47 2e-05
6OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 46 2e-05
7OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.... 31 0.77
8OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yel... 31 0.77
9OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.... 30 1.7
10Y1066_METJA (Q58466) Hypothetical protein MJ1066 28 8.5
11NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (AN... 28 8.5

>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (AtOPR1) (FS-AT-I)
          Length = 372

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KYDR TFYTSDP+VGYTDYPFLE
Sbjct: 347 KYDRPTFYTSDPVVGYTDYPFLE 369



to top

>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KY+R TFYTSDPIVGYTDYPFLE
Sbjct: 351 KYNRDTFYTSDPIVGYTDYPFLE 373



to top

>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)|
           (LeOPR2)
          Length = 355

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 19/23 (82%), Positives = 22/23 (95%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KY+R TFYT+DPI+GYTDYPFLE
Sbjct: 330 KYNRSTFYTNDPIIGYTDYPFLE 352



to top

>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KY+R TFYT DP+VGYTDYPFL+
Sbjct: 363 KYNRKTFYTQDPVVGYTDYPFLQ 385



to top

>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase
           2) (AtOPR2)
          Length = 374

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KY+R TFYTSDP+VGYTDYP LE
Sbjct: 349 KYNRSTFYTSDPVVGYTDYPSLE 371



to top

>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFL 148
           KY+R TFYT DP+VGYTDYPFL
Sbjct: 364 KYNRKTFYTQDPVVGYTDYPFL 385



to top

>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 392

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPF 151
           K+DR TFYT     GY DYPF
Sbjct: 361 KWDRATFYTKMSPKGYIDYPF 381



to top

>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)|
          Length = 399

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 15/23 (65%), Positives = 15/23 (65%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPFLE 145
           KYDR TFYT     GYTDYP  E
Sbjct: 368 KYDRSTFYTMS-AEGYTDYPTYE 389



to top

>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old|
           yellow enzyme homolog)
          Length = 382

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 213 KYDRMTFYTSDPIVGYTDYPF 151
           K+DR +FY      GYTDYPF
Sbjct: 354 KWDRSSFYLPKTEKGYTDYPF 374



to top

>Y1066_METJA (Q58466) Hypothetical protein MJ1066|
          Length = 386

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 57  GHPCPLDEVLQHTFHYDL 110
           GHPC +DE+L+    YDL
Sbjct: 134 GHPCEMDEILKIARDYDL 151



to top

>NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (ANAC009)|
          Length = 418

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -1

Query: 197 PSTPRTPSLDTPITPSSNDHICRFFLRLGQVVMKRMLKNLI 75
           PS P     D+P++P+ +  ICR F +     ++ +  + +
Sbjct: 149 PSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALSHSFV 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,355,803
Number of Sequences: 219361
Number of extensions: 607367
Number of successful extensions: 1501
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1500
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top