ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44 30 2.7
2AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase I... 30 2.7
3CTRO_MOUSE (P49025) Citron Rho-interacting kinase (EC 2.7.11.1) ... 30 3.5
4VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprot... 30 3.5
5AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 1... 30 4.6
6LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Le... 29 7.8
7HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2... 29 7.8

>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44|
          Length = 258

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 489 EEEEEDGHRQDKDE--GLKMKLFQRFHHHHAHDSENEVDEVEELARKLG 349
           EE EE G ++ K E  GLK K+ ++ HH    D+   V+ V E  +K G
Sbjct: 93  EEVEEGGEKKKKKEKKGLKEKIEEKIHHKE-EDTSVPVEVVTEPEKKKG 140



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>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)|
            (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase
            class VI type 11C)
          Length = 1132

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 127  YFFFLRIPRYITTWVYVLLCLFVSLFARV 41
            YF F ++   ++TW+ ++L +F+SLF  +
Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085



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>CTRO_MOUSE (P49025) Citron Rho-interacting kinase (EC 2.7.11.1) (CRIK)|
           (Rho-interacting, serine/threonine-protein kinase 21)
          Length = 2055

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 492 AEEEEEDGH-RQDKDEGLKMKLFQRFHHHHAHDSENEVDEVEELARK 355
           AE E E  H R+D  EG+K KL +       H  EN+V  +E + R+
Sbjct: 668 AERELEKLHNREDSSEGIKKKLVEA--EERRHSLENKVKRLETMERR 712



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>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;|
           Nonstructural protein NS-M; Glycoprotein G1]
          Length = 1441

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
 Frame = -2

Query: 133 ISYFFFLRIPRYITTWVYVLLCLFVSL--------FARVGRLYEQQCDVF 8
           I++++F+ I  Y  TW  +++ L + L        F+ +  +Y ++CD++
Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403



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>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)|
           (Fragment)
          Length = 347

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 127 YFFFLRIPRYITTWVYVLLCLFVSLFARV 41
           YF F ++   ++TW+ ++L +F+SLF  +
Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313



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>LEGB_PEA (P14594) Legumin B [Contains: Legumin B alpha chain (Legumin B|
           acidic chain); Legumin B beta chain (Legumin B basic
           chain)] (Fragment)
          Length = 338

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = -3

Query: 489 EEEEEDGHRQDKDEGLKMKLFQRFHHHHAHDSENEVDEVEE 367
           +EEEE  H Q K+E  + +  QR   H   + E+E +E EE
Sbjct: 52  QEEEEQSHSQRKEEE-EEEQEQRHRKHSKKEDEDEDEEEEE 91



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>HMW2_MYCGE (P47460) Cytadherence high molecular weight protein 2 (Cytadherence|
            accessory protein 2)
          Length = 1805

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/49 (24%), Positives = 29/49 (59%)
 Frame = -3

Query: 483  EEEDGHRQDKDEGLKMKLFQRFHHHHAHDSENEVDEVEELARKLGEAIV 337
            +E+D  R+D++   + K F++ +       + E++E+E++ R L ++ V
Sbjct: 1038 KEQDQQRKDQEINWRFKQFEKEYTDFDEAKKRELEELEKIRRSLSQSNV 1086


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,473,715
Number of Sequences: 219361
Number of extensions: 938166
Number of successful extensions: 3755
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3643
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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