>KTHY_PSEAE (Q9HZN8) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 210

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = -2

Query: 397 MESFVH-DVRRDLALPNLLVIQVGIATAQWQG------NKQGKWLDLVRKE--QRAVRVA 245
           +ESFV  D+R DL L   L +++G+A A  +G       +  ++ + VR+   QRA +  
Sbjct: 119 LESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAP 178

Query: 244 NLKYVDAMGLPIA 206
               V   GLP+A
Sbjct: 179 ERYQVLDAGLPLA 191

>NU4M_FELCA (P48916) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/40 (32%), Positives = 28/40 (70%)
 Frame = +3

Query: 36  ASHQVSYCYILNQIYSSVVLSTTNLRQTNHQSVDMYASAS 155
           A++Q++Y +++  ++  V+ S+  LRQT+ +S+  Y+S S
Sbjct: 253 ATNQMAYPFMMLSLWGMVMTSSICLRQTDLKSLIAYSSVS 292

>MOX2R_RAT (Q9ES58) Cell surface glycoprotein OX2 receptor precursor (CD200|
           cell surface glycoprotein receptor) (OX102 antigen)
          Length = 327

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 85  LLCCPQLIFAKLIIRAW-ICMRRRASC 162
           LLCCP +   K+I+  W I +R + SC
Sbjct: 55  LLCCPSISLTKVILITWTITLRGQPSC 81

>PO2F2_MOUSE (Q00196) POU domain, class 2, transcription factor 2|
           (Octamer-binding transcription factor 2) (Oct-2) (OTF-2)
           (Lymphoid-restricted immunoglobulin octamer-binding
           protein NF-A2)
          Length = 462

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 85  LLCCPQLIFAKLIIRAWICMRRRASCRAGP 174
           LL   QL   K +IR W C RR+   R  P
Sbjct: 311 LLIAEQLHMEKEVIRVWFCNRRQKEKRINP 340

>PO2F2_PIG (Q29013) POU domain, class 2, transcription factor 2|
           (Octamer-binding transcription factor 2) (Oct-2) (OTF-2)
           (Lymphoid-restricted immunoglobulin octamer-binding
           protein NF-A2)
          Length = 478

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 85  LLCCPQLIFAKLIIRAWICMRRRASCRAGP 174
           LL   QL   K +IR W C RR+   R  P
Sbjct: 328 LLIAEQLHMEKEVIRVWFCNRRQKEKRINP 357

>PO2F2_HUMAN (P09086) POU domain, class 2, transcription factor 2|
           (Octamer-binding transcription factor 2) (Oct-2) (OTF-2)
           (Lymphoid-restricted immunoglobulin octamer-binding
           protein NF-A2)
          Length = 478

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +1

Query: 85  LLCCPQLIFAKLIIRAWICMRRRASCRAGP 174
           LL   QL   K +IR W C RR+   R  P
Sbjct: 327 LLIAEQLHMEKEVIRVWFCNRRQKEKRINP 356

>GPI1_YEAST (P53306) Phosphatidylinositol N-acetylglucosaminyltransferase GPI1|
           subunit (EC 2.4.1.198)
          Length = 609

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +3

Query: 51  SYCYILNQIYSSVVLSTTNLRQTNHQSVDMYASASIL 161
           +YC  LN++Y  +  S  NLR T   SV  + S++ +
Sbjct: 144 AYCKALNELYPFIQTSQENLRGTMLNSVAAWCSSTCI 180


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,891,268
Number of Sequences: 219361
Number of extensions: 728079
Number of successful extensions: 2223
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2223
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)