Clone Name | rbart57f10 |
---|---|
Clone Library Name | barley_pub |
>SYI_ENTFA (Q836V1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 926 Score = 31.6 bits (70), Expect = 0.51 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = +3 Query: 24 WSFIYSMEKLLQLATQCNKPSRHALKQQESIFKTWM-HLDLQEKN*FRDEVLKTRRHAAH 200 WSF+ E+ +QLA P +E + TW +D FRD VLK A H Sbjct: 767 WSFLQEEEEYVQLA---EFPGYETFTNEEELMDTWAAFMD------FRDNVLKALEEARH 817 Query: 201 S 203 S Sbjct: 818 S 818
>SYL_PORGI (Q7MW49) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 925 Score = 30.4 bits (67), Expect = 1.1 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -2 Query: 228 EYLGLTRANYALRDAVFSRPR 166 ++LG + NY LRDA+FSR R Sbjct: 465 KHLGCVKVNYRLRDAIFSRQR 485
>Z585B_PONPY (Q5RB30) Zinc finger protein 585B| Length = 769 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 126 WMHLDLQEKN*FRDEVLKTRRH 191 W HLDL ++N +RD +L+T H Sbjct: 41 WQHLDLSQRNLYRDVMLETYSH 62
>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like| protein) Length = 769 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +3 Query: 126 WMHLDLQEKN*FRDEVLKTRRH 191 W HLDL ++N +RD +L+T H Sbjct: 41 WRHLDLSQRNLYRDVMLETYSH 62
>EURL_MOUSE (Q9D7G4) Protein EURL homolog| Length = 290 Score = 29.6 bits (65), Expect = 2.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 Query: 15 KANWSFIYSMEKLLQLATQCNKPSRHAL 98 K NW Y+ K L L ++C+K S+H L Sbjct: 93 KINWIVQYAQNKNLDLESECSKTSQHPL 120
>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 944 Score = 28.9 bits (63), Expect = 3.3 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -2 Query: 222 LGLTRANYALRDAVFSRPR 166 LG + NY LRDA+FSR R Sbjct: 470 LGRVKVNYRLRDAIFSRQR 488
>GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 subunit| Length = 364 Score = 28.5 bits (62), Expect = 4.3 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = +3 Query: 30 FIYSMEKLLQLATQCNKPSRHALKQQESIFKTWMHLDL 143 FI SM QL + NK +R +KQ IFKT +H DL Sbjct: 234 FIVSMSDYDQLDPEDNKYNR--MKQSYEIFKTIVHSDL 269
>DAX1_PIG (P79386) Nuclear receptor 0B1 (Nuclear receptor DAX-1)| Length = 471 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = +2 Query: 230 AVRGLKTRCWSEPSAAARRGHMKALMIHVPGFPGL 334 A++G +CWS + ++K ++ P PGL Sbjct: 361 AIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGL 395
>SYL_BACFR (Q64MG4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 943 Score = 27.7 bits (60), Expect = 7.4 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 237 LTAEYLGLTRANYALRDAVFSRPR 166 + A LG + N+ LRDA+FSR R Sbjct: 464 IKATGLGRVKVNFRLRDAIFSRQR 487
>Z585A_PONPY (Q5RDX1) Zinc finger protein 585A| Length = 737 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 126 WMHLDLQEKN*FRDEVLKTRRH 191 W HLD ++N +RD +L+T H Sbjct: 9 WRHLDPSQRNLYRDVMLETYSH 30
>Z585A_HUMAN (Q6P3V2) Zinc finger protein 585A| Length = 769 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = +3 Query: 126 WMHLDLQEKN*FRDEVLKTRRH 191 W HLD ++N +RD +L+T H Sbjct: 41 WRHLDPSQRNLYRDVMLETYSH 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,934,599 Number of Sequences: 219361 Number of extensions: 766484 Number of successful extensions: 1902 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1870 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1901 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)