>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0090F16, complete sequence
          Length = 147341

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                         
Query: 221   aggtactccgcggtgagaggcttgaagacgcgctgctggtctgaacctagcgcggccgcg 280
             |||||| |||| |||||||||||||||| ||| || | ||| ||  | ||||| ||||| 
Sbjct: 94224 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 94165

                                    
Query: 281   aggcgaggccatatgaaggcgct 303
             || || ||||||||| |||||||
Sbjct: 94164 agccgcggccatatgtaggcgct 94142

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 221      aggtactccgcggtgagaggcttgaagacgcgctgctggtctgaacctagcgcggccgcg 280
                |||||| |||| |||||||||||||||| ||| || | ||| ||  | ||||| ||||| 
Sbjct: 24728264 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 24728323

                                       
Query: 281      aggcgaggccatatgaaggcgct 303
                || || ||||||||| |||||||
Sbjct: 24728324 agccgcggccatatgtaggcgct 24728346

>emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 in linkage group 20,
             complete sequence
          Length = 128296

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 122   aacatggatgcatttggatttgc 144
             |||||||||||||||||||||||
Sbjct: 47497 aacatggatgcatttggatttgc 47475



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   atggatgcatttggatttgc 144
             ||||||||||||||||||||
Sbjct: 46879 atggatgcatttggatttgc 46860

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 221      aggtactccgcggtgagaggcttgaagacgcgctgctggtctgaacctagcgcggccgcg 280
                |||||| |||| |||||||||||||||| ||| || | ||| ||  | ||||| ||||| 
Sbjct: 25039934 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 25039993

                                       
Query: 281      aggcgaggccatatgaaggcgct 303
                || || ||||||||| |||||||
Sbjct: 25039994 agccgcggccatatgtaggcgct 25040016

>ref|XM_477237.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 218  ccaaggtactccgcggtgagaggcttgaagacgc 251
            ||||| ||| |||| |||||||||||||||||||
Sbjct: 1037 ccaagatacgccgccgtgagaggcttgaagacgc 1004

>gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q21-q23, complete
             sequence
          Length = 153053

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 33    atttattcaatggagaaacttttacaactc 62
             |||| ||||||||| |||||||||||||||
Sbjct: 35388 attttttcaatggaaaaacttttacaactc 35359

>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 33    atttattcaatggagaaacttttacaactc 62
             |||| ||||||||| |||||||||||||||
Sbjct: 84355 attttttcaatggaaaaacttttacaactc 84384

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 218     ccaaggtactccgcggtgagaggcttgaagacgc 251
               ||||| ||| |||| |||||||||||||||||||
Sbjct: 8092508 ccaagatacgccgccgtgagaggcttgaagacgc 8092475

>gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, complete sequence
          Length = 117710

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 141   ttgcaggagaagaattaatttagaga 166
             ||||||||| ||||||||||||||||
Sbjct: 92650 ttgcaggaggagaattaatttagaga 92675

>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 218   ccaaggtactccgcggtgagaggcttgaagacgc 251
             ||||| ||| |||| |||||||||||||||||||
Sbjct: 26280 ccaagatacgccgccgtgagaggcttgaagacgc 26247

>emb|AL451005.9| Human DNA sequence from clone RP11-92B10 on chromosome X Contains the
             5' end of a variant of the CUL4B gene for cullin 4B and
             the 5' end of a variant of the gene for MCT-1 protein
             (MCT-1), complete sequence
          Length = 26768

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 308   atccacgttcctgggtttccc 328
             |||||||||||||||||||||
Sbjct: 17593 atccacgttcctgggtttccc 17573

>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence
          Length = 180568

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 154   attaatttagagacgaggtct 174
             |||||||||||||||||||||
Sbjct: 27684 attaatttagagacgaggtct 27664

>gb|AC083873.3|AC083873 Homo sapiens chromosome 7 clone RP11-372E15, complete sequence
          Length = 161635

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    acaacaggaatccatcttcaa 121
              |||||||||||||||||||||
Sbjct: 153130 acaacaggaatccatcttcaa 153150

>gb|AY107924.1| Zea mays PCO099218 mRNA sequence
          Length = 625

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 215 agaccaaggtactccgcggtgagaggcttgaagacgc 251
           ||||| || |||||||| ||||||||||| |||||||
Sbjct: 384 agaccgagatactccgccgtgagaggcttaaagacgc 348

>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 135   ttggatttgcaggagaagaattaat 159
             ||||||||| |||||||||||||||
Sbjct: 28242 ttggatttggaggagaagaattaat 28266

>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 38     ttcaatggagaaacttttacaactc 62
              ||||||||| |||||||||||||||
Sbjct: 151426 ttcaatggaaaaacttttacaactc 151402

>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tttatttattcaatggagaa 49
             ||||||||||||||||||||
Sbjct: 63221 tttatttattcaatggagaa 63240

>ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (528.t00001)
           partial mRNA
          Length = 2586

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 atttggatttgcaggagaag 152
           ||||||||||||||||||||
Sbjct: 345 atttggatttgcaggagaag 364

>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a
             novel pseudogene, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    attcaatggagaaactttta 56
             ||||||||||||||||||||
Sbjct: 39215 attcaatggagaaactttta 39196

>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tttatttattcaatggagaa 49
             ||||||||||||||||||||
Sbjct: 62061 tttatttattcaatggagaa 62080

>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence
          Length = 161791

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aaggcaaactggagctttat 34
             ||||||||||||||||||||
Sbjct: 64903 aaggcaaactggagctttat 64884

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 30      tttatttattcaatggagaa 49
               ||||||||||||||||||||
Sbjct: 5376547 tttatttattcaatggagaa 5376566

>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   tttatttattcaatggagaa 49
            ||||||||||||||||||||
Sbjct: 3680 tttatttattcaatggagaa 3699

>emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-671J11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181987

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 155    ttaatttagagacgaggtct 174
              ||||||||||||||||||||
Sbjct: 120425 ttaatttagagacgaggtct 120406

>gb|AY110277.1| Zea mays CL615_-1 mRNA sequence
          Length = 982

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 296 aaggcgctgatgatccacgt 315
           ||||||||||||||||||||
Sbjct: 617 aaggcgctgatgatccacgt 636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,858,900
Number of Sequences: 3902068
Number of extensions: 2858900
Number of successful extensions: 57834
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57719
Number of HSP's gapped (non-prelim): 115
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)