ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart57f08 |
|---|---|
| Clone Library Name | barley_pub |
>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2| Length = 880 Score = 34.7 bits (78), Expect = 0.13 Identities = 17/71 (23%), Positives = 32/71 (45%) Frame = -3 Query: 400 DSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVI 221 + +++ +GS K ++ + P P A P T E++ + PP P+P+ Sbjct: 22 NKTIKETLQGSADAGKRKKLIIKKKGDDPSTPSPAASPKKETVAESDPSSKPPVMPLPLP 81 Query: 220 QEVGQSLGIAP 188 + GQS + P Sbjct: 82 DDSGQSPIVRP 92
>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 34.3 bits (77), Expect = 0.16 Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 20/92 (21%) Frame = -2 Query: 344 NPARATCTCPQ----------EEEAQGQAYVLYIPRD*RC-----SSTSCHSYPSDSGGR 210 NP+ ATC CP+ ++ + L RC CH +PS SGGR Sbjct: 4188 NPSGATCICPEGKYMMNGTCHDDSLLDDSCKLTCENGGRCILNEKGDLRCHCWPSYSGGR 4247 Query: 209 AVTWHSP*EAYGG-----STYGRSC*LCAIVF 129 H G ST GR +CA+ F Sbjct: 4248 CEVNHCSNYCQNGGTCIPSTLGRPTCICALGF 4279
>NFH_RAT (P16884) Neurofilament triplet H protein (200 kDa neurofilament| protein) (Neurofilament heavy polypeptide) (NF-H) Length = 1072 Score = 33.5 bits (75), Expect = 0.28 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 10/112 (8%) Frame = -3 Query: 442 PSKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKK----------RKPKA 293 P+K G +++A P + + S + KP +E+PA KK +KP+ Sbjct: 959 PAKLGVKEEAKPKEKAEDAKAKEPSKPSEKEKPKKEEVPAAPEKKDTKEEKTTESKKPEE 1018 Query: 292 KPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDPADSAP 137 KP + ED +P P ++ A + + D+ P++ AP Sbjct: 1019 KPKMEAKAKEEDKGLPQEPSKPKTEK-------AEKSSSTDQKDSQPSEKAP 1063
>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2| Length = 891 Score = 32.7 bits (73), Expect = 0.48 Identities = 17/71 (23%), Positives = 31/71 (43%) Frame = -3 Query: 400 DSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVI 221 + +++ +GS K ++ + P P A P T E+ + PP P+P+ Sbjct: 22 NKTIKETLQGSADAGKRKKLIIKKKGDDPSTPSPAASPKKETVAESAPSSKPPVMPLPLP 81 Query: 220 QEVGQSLGIAP 188 + GQS + P Sbjct: 82 GDSGQSPIVRP 92
>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1| Length = 2173 Score = 32.0 bits (71), Expect = 0.82 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 331 LPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDP 152 LP VP+ P KP++S SQ+ P P++ + S+ K DR E P Sbjct: 1040 LPPTVPEASAPPQKPLNSQSQK-------HLAPQPLLSPLSPSIEPTIRKTGQDRSQEAP 1092 Query: 151 ADSAPLSSDV*SIH 110 PLSS++ H Sbjct: 1093 --ETPLSSELEPFH 1104
>ZMPB_STRPN (Q9L7Q2) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)| Length = 1906 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -3 Query: 346 PILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDR 167 P +E P PK + KP T + E+ + A P PV +EVG + PE+ + Sbjct: 208 PKTEESPKEEPKS---EVKPTDDTLPKVEEGKEDSAEPAPV-EEVGGEVESKPEEKVAVK 263 Query: 166 LMEDPADSAPLSSDV 122 P+D S V Sbjct: 264 PESQPSDKPAEESKV 278
>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1| Length = 2171 Score = 31.2 bits (69), Expect = 1.4 Identities = 30/114 (26%), Positives = 45/114 (39%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTS 272 SP +KG P + + R + R + LP VP+ P KP++S S Sbjct: 998 SPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDACLPPTVPEAPAPPQKPLNSQS 1057 Query: 271 QETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSDV*SIH 110 Q+ P P++ + S+ K D E P APLSS++ H Sbjct: 1058 QK-------HLAPPPLLSPLLPSIKPTVRKTRQDGSQEAP--EAPLSSELEPFH 1102
>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor| with BRCT domains 1) Length = 2089 Score = 31.2 bits (69), Expect = 1.4 Identities = 30/114 (26%), Positives = 45/114 (39%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTS 272 SP +KG P + + R + R + LP VP+ P KP++S S Sbjct: 998 SPRRHQKGLLNCKMPPAEKASRIRAAEKVSRGDQESPDACLPPTVPEAPAPPQKPLNSQS 1057 Query: 271 QETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSDV*SIH 110 Q+ P P++ + S+ K D E P APLSS++ H Sbjct: 1058 QK-------HLAPPPLLSPLLPSIKPTVRKTRQDGSQEAP--EAPLSSELEPFH 1102
>ZMPB_STRR6 (Q8DQN5) Zinc metalloprotease zmpB precursor (EC 3.4.24.-)| Length = 1876 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/75 (29%), Positives = 32/75 (42%) Frame = -3 Query: 346 PILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDR 167 P +E P PK + KP T + E+ + A P PV +EVG + PE+ + Sbjct: 208 PKTEESPKEEPKS---EVKPTDDTLPKVEEGKEDSAEPAPV-EEVGGEVESKPEEKVAVK 263 Query: 166 LMEDPADSAPLSSDV 122 P+D S V Sbjct: 264 PESQPSDKPAEESKV 278
>IGA4_HAEIN (P45386) Immunoglobulin A1 protease precursor (EC 3.4.21.72) (IGA1| protease) Length = 1849 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Frame = -3 Query: 442 PSKKGTRKKATPVV-DSSVRRCTR----GSIKRDGFKPILQELPAHVPKKRKPKAKPMSS 278 PS+K + TPVV +++ + T ++++ + + Q PK+ +P AKP + Sbjct: 1265 PSEKTNAEPVTPVVSENTATQPTETEETAKVEKEKTQEVPQVASQESPKQEQPAAKPQAQ 1324 Query: 277 TSQETEDAQ 251 T + E A+ Sbjct: 1325 TKPQAEPAR 1333
>FOXB1_HUMAN (Q99853) Forkhead box protein B1 (Transcription factor FKH-5)| Length = 324 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -3 Query: 346 PILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSL 200 P L LPA +P +S TS +T +Q PATP + +L Sbjct: 270 PALPALPAPIPTLLSNSPPSLSPTSSQTATSQSSPATPSETLTSPASAL 318
>FOXB1_MOUSE (Q64732) Forkhead box protein B1 (Transcription factor FKH-5)| Length = 325 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = -3 Query: 346 PILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSL 200 P L LPA +P +S TS +T +Q PATP + +L Sbjct: 271 PALPALPAPIPTLLSNSPPSLSPTSSQTATSQSSPATPSETLTSPASAL 319
>FOG2_MOUSE (Q8CCH7) Zinc finger protein ZFPM2 (Zinc finger protein multitype| 2) (Friend of GATA protein 2) (Friend of GATA-2) (FOG-2) (mFOG-2) Length = 1151 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -3 Query: 349 KPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEK 182 + +LQ HVP + P+ M + TED+ + PAT + ++ QS P K Sbjct: 376 RELLQHQELHVPSGKLPRESDMEHSPSGTEDS-LQPATDLLARSDLSQSQKAMPTK 430
>VCX1_HUMAN (Q9H320) Variable charge X-linked protein 1 (VCX-B1 protein)| (Variably charged protein X-B1) (Variable charge protein on X with ten repeats) (VCX-10r) Length = 206 Score = 30.0 bits (66), Expect = 3.1 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDS--SVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSS 278 S PS +KK T V +VRR RG + G + + A + P Sbjct: 23 SSQPSPSDPKKKTTKVAKKGKAVRRGRRG---KKGAATKMAAVTAPEAESAPAAPGPSDQ 79 Query: 277 TSQETEDAQVPPATPI-------PVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSD 125 SQE ++PP P+ P+ QE ++ E + L ++ PLS + Sbjct: 80 PSQELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEVEEPLSQESQVEEPLSQE 137
>MK15_MOUSE (Q80Y86) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 7) Length = 549 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -3 Query: 286 MSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEK-LTVDRLMEDP 152 + S Q+T DA +PP TP + + + L AP+K L+ ++ ++ P Sbjct: 258 LGSRPQQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHP 303
>PTG3C_BACSU (P20166) PTS system glucose-specific EIICBA component (EIICBA-Glc)| (EII-Glc/EIII-Glc) [Includes: Glucose permease IIC component (PTS system glucose-specific EIIC component); Glucose-specific phosphotransferase enzyme IIB component (EC 2.7.1.6 Length = 699 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -3 Query: 364 KRDGFKPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAP 188 + DG K +Q++ A RKP+ +P +S +QE QV P+ E+G+ + ++P Sbjct: 502 RSDGLKTQMQDIIA----GRKPRPEPKTS-AQEEVGQQVEEVIAEPLQNEIGEEVFVSP 555
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 5/43 (11%) Frame = -3 Query: 346 PILQELPAHVPKKRKPKAKPMSSTSQETED-----AQVPPATP 233 P+ ++ P V KK P+AKP+SS +E + Q+P P Sbjct: 1184 PLEEKKPIPVDKKLPPEAKPLSSEGEEKHEILKAHVQIPEEEP 1226
>MCH_METTR (Q9RPD4) N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase| (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) (Fragment) Length = 260 Score = 29.6 bits (65), Expect = 4.1 Identities = 18/57 (31%), Positives = 30/57 (52%) Frame = -3 Query: 349 KPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKL 179 +P+ QELP + +S + +A PP P PV+ +V +S G++P+KL Sbjct: 65 EPLFQELPY----------EDSASRATIVLEAGAPP--PEPVVAKVAESCGVSPDKL 109
>PAN1_YEAST (P32521) Protein PAN1| Length = 1480 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -3 Query: 301 PKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDPADSAP 137 P A P+ + E + P PIP + +AP VD E P SAP Sbjct: 1324 PPAVPVPQANTSNEKSSPIPIAPIPPSVTQEPPVPLAPPLPAVDGFQEPPIPSAP 1378
>CCD12_HUMAN (Q8WUD4) Coiled-coil domain-containing protein 12| Length = 166 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/44 (40%), Positives = 27/44 (61%) Frame = -3 Query: 313 KKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEK 182 K+R P+AKP++ +E Q+ A P PVI+EV + +AP K Sbjct: 71 KRRVPQAKPVA--VEEKVKEQLEAAKPEPVIEEVDLA-NLAPRK 111
>PLMN_MOUSE (P20918) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Angiostatin; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 29.3 bits (64), Expect = 5.3 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = -3 Query: 283 SSTSQETEDAQVPPATPIPVIQEVGQSLG 197 SS S + D+ VPP PV+QE QS G Sbjct: 354 SSASPDQSDSSVPPEEQTPVVQECYQSDG 382
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = -3 Query: 343 ILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAP 188 +L PA P++ +P S T +E + ++ PP P P GQ G+ P Sbjct: 418 LLSRTPALSPQRPLTTQQPQSGTLKEPDSSKTPPQRPAPQ-GGPGQPQGMQP 468
>CSF1_HUMAN (P09603) Macrophage colony-stimulating factor 1 precursor (CSF-1)| (MCSF) (M-CSF) (Lanimostim) Length = 554 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/65 (33%), Positives = 26/65 (40%) Frame = -3 Query: 334 ELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMED 155 E P H K +P ST Q E PP TP+ +G S P + MED Sbjct: 238 EQPLHTVDPGSAKQRPPRSTCQSFE----PPETPVVKDSTIGGSPQPRPSVGAFNPGMED 293 Query: 154 PADSA 140 DSA Sbjct: 294 ILDSA 298
>CCNK_MOUSE (O88874) Cyclin-K| Length = 554 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/92 (29%), Positives = 33/92 (35%), Gaps = 14/92 (15%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDSSVRRCTRGSI-----KRDGFKPILQELPAHVPKKRKPKAKP 287 SP PS K+A V + T K + P L PAH P RKP P Sbjct: 325 SPQPSPPRQAKRAVVVSPKEENKATEPPPPPKIPKLEATHPPLP--PAHPPPDRKPPLAP 382 Query: 286 MSSTSQETEDAQV---------PPATPIPVIQ 218 ++ T + PPA P PV Q Sbjct: 383 ALGEAEATGPVETSDLPKVQIPPPAHPAPVHQ 414
>FOG2_HUMAN (Q8WW38) Zinc finger protein ZFPM2 (Zinc finger protein multitype| 2) (Friend of GATA protein 2) (FOG-2) (hFOG-2) Length = 1151 Score = 29.3 bits (64), Expect = 5.3 Identities = 16/49 (32%), Positives = 25/49 (51%) Frame = -3 Query: 349 KPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQS 203 + +LQ HVP + P+ M + TED+ + PAT + E+ QS Sbjct: 376 RELLQHQELHVPSGKLPRESDMEHSPSATEDS-LQPATDLLTRSELPQS 423
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Frame = -3 Query: 355 GFKPILQELPAHVPKKRKPKAKPMSSTSQET-EDAQVPPATPIPVIQEVGQSLGIAPEKL 179 G + ++Q+ VP+K+ P AKP+ + Q+ +VP P V+ + + + + +K Sbjct: 477 GMEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKK 536 Query: 178 TVDRLMEDPA 149 T + ++ A Sbjct: 537 TQAEIEQEMA 546
>IGF1_ONCKI (P17085) Insulin-like growth factor I precursor (IGF-I)| (Somatomedin) Length = 188 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = -3 Query: 439 SKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTS 272 +++ T TP V ++V+ RG+ +R A P K KPK KP+S S Sbjct: 119 AQRHTDMPRTPKVSTAVQNVDRGTERRT----------AQHPDKTKPKKKPLSGNS 164
>VCX3_HUMAN (Q9NNX9) Variable charge X-linked protein 3 (VCX-A protein)| (Variably charged protein X-A) (Variable charge protein on X with eight repeats) (VCX-8r) Length = 186 Score = 28.9 bits (63), Expect = 6.9 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDS--SVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSS 278 S PS +KK T V +VRR RG + G + + A + P Sbjct: 23 SSQPSPSDPKKKTTKVAKKGKAVRRGRRG---KKGAATKMAAVTAPEAESGPAAPGPSDQ 79 Query: 277 TSQETEDAQVPPATPI-------PVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSD 125 SQE ++PP P+ P+ QE ++ E + L ++ PLS + Sbjct: 80 PSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQE 137
>H11_GLYBA (P40263) Histone H1-I| Length = 233 Score = 28.9 bits (63), Expect = 6.9 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 16/94 (17%) Frame = -3 Query: 460 SFRSPAPSKKGTRKKATPVVDSS-------------VRRCTRGSIKRDGFKPILQELPAH 320 SF+ P P+KK R ++ P ++ V + + ++++ KP ++ A Sbjct: 120 SFKMPPPAKKVDRPESAPKKKATKTKTRVERKEKKVVAKKPKPAVEKKAAKPAAKKAAAK 179 Query: 319 VPKKR---KPKAKPMSSTSQETEDAQVPPATPIP 227 K+ KP AK ++ + + A P A P P Sbjct: 180 PAAKKAAAKPAAKKPAAKASPKKAAAKPKAKPTP 213
>ATG15_KLULA (Q6CU02) Putative lipase ATG15 (EC 3.1.1.3) (Autophagy-related| protein 15) Length = 531 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = -3 Query: 319 VPKKRKPKAKPMSSTSQETEDAQVPPATP 233 VPKK K + SSTS ET V P+ P Sbjct: 482 VPKKHKSSSSTASSTSAETSTLTVGPSPP 510
>MIS4_SCHPO (Q09725) Sister chromatid cohesion protein mis4 (SCC2 homolog)| Length = 1583 Score = 28.9 bits (63), Expect = 6.9 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 9/112 (8%) Frame = -3 Query: 463 LSFRSPAPSKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPM 284 LS P+ R A+PV+D V S D K ++Q K KP A + Sbjct: 86 LSAMITEPAMPAMRVNASPVLDQKVCNSDSLSELNDFTKSLIQPSMLMCEPKEKPDASSI 145 Query: 283 SSTSQETEDAQVPPATP--IPVIQEVGQSLGIAPEKLTVD-------RLMED 155 ++ +++ + P++ P V ++ + K + D RLMED Sbjct: 146 NTNRSSSDNGFLTPSSSPRSPSCSRVFNAVQLCSPKKSKDDITTPKKRLMED 197
>PAPO2_XENLA (P51005) Poly(A) polymerase alpha-B (EC 2.7.7.19) (PAP)| (Polynucleotide adenylyltransferase) Length = 484 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 301 PKAKPMSSTSQETE--DAQVPPATPIPVIQ 218 P A P S S T+ D V PATPIPVI+ Sbjct: 446 PGALPSSQRSSSTDLSDISVLPATPIPVIK 475
>SP110_HUMAN (Q9HB58) Sp110 nuclear body protein (Speckled 110 kDa)| (Transcriptional coactivator Sp110) (Interferon-induced protein 41/75) Length = 689 Score = 28.9 bits (63), Expect = 6.9 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Frame = -3 Query: 331 LPAHVPKKRK-----PK-AKPMSSTSQETE-----DAQVPPATPIPVIQEVGQSLGIAPE 185 LP H P + P+ ++P +S+ Q TE + P P+P + + G+S + + Sbjct: 139 LPHHKPPQPSCSPCAPRVSEPGTSSQQSTEILSESPSPSDPVLPLPALIQEGRSTSVTND 198 Query: 184 KLTVDRLMEDPADSAP 137 KLT E+ ++ P Sbjct: 199 KLTSKMNAEEDSEEMP 214
>VID21_ASPFU (Q4WP03) Chromatin modification-related protein vid21| Length = 1467 Score = 28.9 bits (63), Expect = 6.9 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 3/94 (3%) Frame = -3 Query: 403 VDSSVRRCTRGSIKRDGFKP--ILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPI 230 VD+SV +G + P + +LP+ +RKP+++P +Q +ED + PA+ Sbjct: 199 VDASVSPALKGLPPSEVAPPRAVSNQLPS---AQRKPESRPSLVLAQPSEDQPLSPASSA 255 Query: 229 -PVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLS 131 P + ++P+ + + E AD LS Sbjct: 256 GPYSNNTPAPVAVSPDTSPAEEVTEG-ADEVALS 288
>VCOM_ADE40 (P48753) Minor core protein (Protein V) (pV)| Length = 358 Score = 28.9 bits (63), Expect = 6.9 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%) Frame = -3 Query: 451 SPAPS-KKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSST 275 +P PS K T ++ PV + + +KR+ + + VPK++K + Sbjct: 141 NPTPSLKPATAQQILPVTE------IKRGVKRENKDELQPTMQLMVPKRQKLE----EVL 190 Query: 274 SQETEDAQVPPATPIPVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSDV 122 D V P + I+E+G LG+ TVD + A S+ +S+ V Sbjct: 191 ENMKVDPSVEPEVKVRPIKEIGPGLGVQ----TVDIQIPVRASSSTVSTAV 237
>PHF20_HUMAN (Q9BVI0) PHD finger protein 20 (Hepatocellular carcinoma-associated| antigen 58) (Glioma-expressed antigen 2) (Transcription factor TZP) (Novel zinc finger protein) Length = 1012 Score = 28.9 bits (63), Expect = 6.9 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = -3 Query: 454 RSPAPSKKGTRKKATP--VVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMS 281 R P+ S K +++ T V SS + K FK ++ P KK+K K KP Sbjct: 497 RGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKPKK-KKKKKKKTKPEC 555 Query: 280 STSQETEDAQVPPATP 233 S+E D P+ P Sbjct: 556 PCSEEISDTSQEPSPP 571
>VCXC_HUMAN (Q9H321) VCX-C protein (Variably charged protein X-C)| Length = 216 Score = 28.9 bits (63), Expect = 6.9 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 9/118 (7%) Frame = -3 Query: 451 SPAPSKKGTRKKATPVVDS--SVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSS 278 S PS +KK T V +VRR RG + G + + A + P Sbjct: 23 SSQPSPSDPKKKTTKVAKKGKAVRRGRRG---KKGAATKMAAVTAPEAESGPAAPGPSDQ 79 Query: 277 TSQETEDAQVPPATPI-------PVIQEVGQSLGIAPEKLTVDRLMEDPADSAPLSSD 125 SQE ++PP P+ P+ QE ++ E + L ++ PLS + Sbjct: 80 PSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQE 137
>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)| Length = 723 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = -3 Query: 340 LQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATP------IPVIQEVGQSLGIAPEKL 179 + LP ++R P PMS E E PPA+P V + +++ + E+L Sbjct: 451 IDRLPMRRRRRRAPPPPPMSEELSEPEVEAFPPASPPRRSFEEEVRDTIVEAIRLLQEEL 510 Query: 178 TV 173 TV Sbjct: 511 TV 512
>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)| Length = 608 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = -3 Query: 340 LQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATP------IPVIQEVGQSLGIAPEKL 179 + LP ++R P PMS E E PPA+P V + +++ + E+L Sbjct: 336 IDRLPMRRRRRRAPPPPPMSEELSEPEVEAFPPASPPRRSFEEEVRDTIVEAIRLLQEEL 395 Query: 178 TV 173 TV Sbjct: 396 TV 397
>TONB_PSEAE (Q51368) Protein tonB| Length = 342 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/49 (34%), Positives = 21/49 (42%) Frame = -3 Query: 349 KPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEVGQS 203 KP+ +P PK +PK KP S E P + P VGQS Sbjct: 180 KPVENAIPKAKPKP-EPKPKPEPEPSTEASSQPSPSSAAPPPAPTVGQS 227
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%) Frame = -3 Query: 313 KKRKPKAKPMSSTSQETEDAQVPPA---TPIPVIQEVGQSLGIAP 188 +K+KP KP S Q+T+ A P A TP P + + G L P Sbjct: 65 EKKKPSPKPQPSPQQQTK-ASAPSAGGETPRPAVPKPGPGLKPGP 108
>DNB2_ADE05 (P03265) Early E2A DNA-binding protein| Length = 529 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/86 (23%), Positives = 34/86 (39%) Frame = -3 Query: 439 SKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTSQETE 260 S++ +++ TP R R D P P P K++ + + S +++ Sbjct: 3 SREEEQRETTPERGRGAAR--RPPTMEDVSSPSPSPPPPRAPPKKRMRRRIESEDEEDSS 60 Query: 259 DAQVPPATPIPVIQEVGQSLGIAPEK 182 + P TP P L IAP+K Sbjct: 61 QDALVPRTPSPRPSTSAADLAIAPKK 86
>NOLC1_HUMAN (Q14978) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)| (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar and coiled-body phosphoprotein 1) Length = 699 Score = 28.5 bits (62), Expect = 9.1 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%) Frame = -3 Query: 337 QELPAHVPKKRKPKAKPMSS----TSQETEDAQVPPATPIPV-IQEVGQSLGIAPEKLTV 173 ++L A+ P +K K K SS +S+E E+ Q PPA V + VG G A K + Sbjct: 66 RKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKASE 125 Query: 172 DRLMEDPAD 146 E+ D Sbjct: 126 SSSSEESRD 134
>MK15_RAT (Q9Z2A6) Mitogen-activated protein kinase 15 (EC 2.7.11.24)| (Extracellular signal-regulated kinase 7) Length = 547 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -3 Query: 286 MSSTSQETEDAQVPPATPIPVIQEVGQSLGIAPEK-LTVDRLMEDP 152 + S ++T DA +PP TP + + + L AP+K L+ ++ ++ P Sbjct: 258 LGSRPRQTLDALLPPDTPPEALDLLKRLLAFAPDKRLSAEQALQHP 303
>JIP3_MOUSE (Q9ESN9) C-jun-amino-terminal kinase-interacting protein 3| (JNK-interacting protein 3) (JIP-3) (JNK MAP kinase scaffold protein 3) (Mitogen-activated protein kinase 8-interacting protein 3) (JNK/SAPK-associated protein 1) (JSAP1) (Sunday drive Length = 1337 Score = 28.5 bits (62), Expect = 9.1 Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%) Frame = -3 Query: 385 RCT--RGSIKRDGFKPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPIPVIQEV 212 RC R + G P+L + V K P ST + TE +VP P Sbjct: 855 RCNVPRSNCSSRGDTPVLDKGQGDVATTANGKVNPSQSTEEATEATEVPDPGP-----SE 909 Query: 211 GQSLGIAPEKLTVDRLMEDPADSAPLSS 128 ++ + P LT + + DPA + P SS Sbjct: 910 SEATTVRPGPLT-EHVFTDPAPT-PSSS 935
>ALO_YEAST (P54783) D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) (ALO)| (L-galactono-gamma-lactone oxidase) Length = 526 Score = 28.5 bits (62), Expect = 9.1 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -2 Query: 308 EEAQGQAYVLYIPRD*RCSSTSCHSYPSDSGGRAVTWHSP*EAYGGSTYGRSC 150 + A + + +++P + RCS+T+ S P D+ R T SP G YG C Sbjct: 342 QAAINKEFYVHVPMEVRCSNTTLPSEPLDTSKRTNT--SP-----GPVYGNVC 387
>TF3A_BUFAM (P34694) Transcription factor IIIA (Factor A) (TFIIIA)| Length = 339 Score = 28.5 bits (62), Expect = 9.1 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = -3 Query: 466 DLSFRSPAPSKKGTRKKATPVVDSSVRRCTRGSIKRDGFKPILQELPAHVPKKRKPKAKP 287 D F + P KK K PV + R G+KP + KK+KP P Sbjct: 268 DRHFNTHDPEKKKMVKPPRPVRSLASRL--------SGYKPKKSK------KKKKPSQTP 313 Query: 286 MSSTSQETEDAQVPPATPIPVIQEV 212 + ++ DA A P+PV++ + Sbjct: 314 AMESQEQQPDAS--KADPLPVLENL 336
>HSH2D_HUMAN (Q96JZ2) Hematopoietic SH2 domain-containing protein (Hematopoietic| SH2 protein) (Adaptor in lymphocytes of unknown function X) Length = 352 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 349 KPILQELPAHVPKKRKPKAKPMSSTSQETEDAQVPPATPI-PVIQEVGQSLGIAPEK 182 KP+L H K+RKP A+ T++E + PP +P+ Q++ +SL + PE+ Sbjct: 162 KPVL----CHQSKERKPSAEMNRITTKEA-TSSCPPKSPLGETRQKLWRSLKMLPER 213
>SN_HUMAN (Q9BZZ2) Sialoadhesin precursor (Sialic acid-binding Ig-like| lectin-1) (Siglec-1) (CD169 antigen) Length = 1709 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 18/59 (30%) Frame = -2 Query: 386 TVYSWLHQA*WLQANP-----------ARATCTCPQEEEAQG-------QAYVLYIPRD 264 T+Y+W H WLQ P A A Q ++AQG VLY P+D Sbjct: 1290 TLYTWYHNGRWLQEGPAASLSFLVATRAHAGAYSCQAQDAQGTRSSRPAALQVLYAPQD 1348
>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B| precursor (Low-density lipoprotein receptor-related protein-deleted in tumor) (LRP-DIT) Length = 4599 Score = 28.5 bits (62), Expect = 9.1 Identities = 25/92 (27%), Positives = 32/92 (34%), Gaps = 20/92 (21%) Frame = -2 Query: 344 NPARATCTCPQ----------EEEAQGQAYVLYIPRD*RC-----SSTSCHSYPSDSGGR 210 NP+ ATC CP+ ++ + L RC CH +PS SG R Sbjct: 4188 NPSGATCVCPEGKYLINGTCNDDSLLDDSCKLTCENGGRCILNEKGDLRCHCWPSYSGER 4247 Query: 209 AVTWHSP*EAYGGST-----YGRSC*LCAIVF 129 H G T GR CA+ F Sbjct: 4248 CEVNHCSNYCQNGGTCVPSVLGRPTCSCALGF 4279
>H1_DICDI (P54671) Histone H1| Length = 179 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 316 PKKRKPKAKPMSSTSQETEDAQVPPATP 233 P +KPKAK +T+ TE PPATP Sbjct: 103 PVAKKPKAK---TTATSTETTAAPPATP 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,955,830 Number of Sequences: 219361 Number of extensions: 1240519 Number of successful extensions: 4748 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4510 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4734 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
