Clone Name | rbart57f05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 167 bits (84), Expect = 3e-38 Identities = 102/108 (94%) Strand = Plus / Plus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66828 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 66887 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 66888 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 66935
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 167 bits (84), Expect = 3e-38 Identities = 102/108 (94%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21267531 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 21267472 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 21267471 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 21267424 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||||| | |||||| || Sbjct: 21178169 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccag 21178228 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 21178229 cacgttggccttgatggcggtgca 21178252 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| || Sbjct: 21171455 cttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgag 21171514 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 21171515 cacgttggccttgatggcggtgca 21171538 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 21174901 cttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgag 21174960 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||| ||||||||| Sbjct: 21174961 cacgttggccttgacggcggtgca 21174984 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 21148328 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21148387 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21148388 gacggcggtgca 21148399 Score = 58.0 bits (29), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatg---cc 374 |||||||||| |||||||||||||||||| | || ||||| ||||| || |||| || Sbjct: 21143567 cttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatccc 21143626 Query: 375 tagcacgtcggccttgatggcggtgca 401 || |||| |||||||||||||||||| Sbjct: 21143627 aagaacgttggccttgatggcggtgca 21143653 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 21151621 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 21151680 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21151681 gacggcggtgca 21151692 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 21155736 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 21155795 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21155796 gacggcggtgca 21155807 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 21139212 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 21139271 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 21139272 cacggcggtgca 21139283
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 167 bits (84), Expect = 3e-38 Identities = 102/108 (94%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21278795 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 21278736 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 21278735 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 21278688 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||||| | |||||| || Sbjct: 21189433 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccag 21189492 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 21189493 cacgttggccttgatggcggtgca 21189516 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| || Sbjct: 21182719 cttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgag 21182778 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 21182779 cacgttggccttgatggcggtgca 21182802 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 21186165 cttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgag 21186224 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||| ||||||||| Sbjct: 21186225 cacgttggccttgacggcggtgca 21186248 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 21159592 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21159651 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21159652 gacggcggtgca 21159663 Score = 58.0 bits (29), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatg---cc 374 |||||||||| |||||||||||||||||| | || ||||| ||||| || |||| || Sbjct: 21154831 cttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatccc 21154890 Query: 375 tagcacgtcggccttgatggcggtgca 401 || |||| |||||||||||||||||| Sbjct: 21154891 aagaacgttggccttgatggcggtgca 21154917 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 21162885 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 21162944 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21162945 gacggcggtgca 21162956 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 21167000 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 21167059 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 21167060 gacggcggtgca 21167071 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 21150476 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 21150535 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 21150536 cacggcggtgca 21150547
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 145 bits (73), Expect = 1e-31 Identities = 85/89 (95%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 415 Query: 354 ggggaggttgatgtggatgcctagcacgt 382 ||||||||||| || |||||| ||||||| Sbjct: 414 ggggaggttgaggttgatgcccagcacgt 386
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||||| | |||||| || Sbjct: 366 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccag 307 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 306 cacgttggccttgatggcggtgca 283
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||||| | |||||| || Sbjct: 27537 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccag 27478 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 27477 cacgttggccttgatggcggtgca 27454 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| || Sbjct: 34251 cttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgag 34192 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 34191 cacgttggccttgatggcggtgca 34168 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 30805 cttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgag 30746 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||| ||||||||| Sbjct: 30745 cacgttggccttgacggcggtgca 30722 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 57378 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 57319 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 57318 gacggcggtgca 57307 Score = 58.0 bits (29), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatg---cc 374 |||||||||| |||||||||||||||||| | || ||||| ||||| || |||| || Sbjct: 62139 cttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatccc 62080 Query: 375 tagcacgtcggccttgatggcggtgca 401 || |||| |||||||||||||||||| Sbjct: 62079 aagaacgttggccttgatggcggtgca 62053 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 54085 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 54026 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 54025 gacggcggtgca 54014 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 49970 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 49911 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 49910 gacggcggtgca 49899 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 66494 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 66435 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 66434 cacggcggtgca 66423
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||||| | |||||| || Sbjct: 435 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccag 376 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 375 cacgttggccttgatggcggtgca 352
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| || Sbjct: 372 cttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgag 313 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 312 cacgttggccttgatggcggtgca 289
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| || Sbjct: 459 cttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgag 400 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 399 cacgttggccttgatggcggtgca 376
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 438 ggggaggttga 428
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 26823978 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 26823919 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 26823918 ggggaggttga 26823908 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 26833569 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 26833510 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 26833509 cacgttggccttgatggcggtgca 26833486 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gcatccccttttctttgtgggagat 254 |||||||||||||||||| |||||| Sbjct: 16736465 gcatccccttttctttgtaggagat 16736489
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 2521 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 2462 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 2461 ggggaggttga 2451 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 12112 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 12053 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 12052 cacgttggccttgatggcggtgca 12029
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 90031 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 89972 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 89971 ggggaggttga 89961 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 99622 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 99563 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 99562 cacgttggccttgatggcggtgca 99539
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 438 ggggaggttga 428
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 93.7 bits (47), Expect = 4e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| |||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 423 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 364 Query: 354 ggggaggttga 364 ||||||||||| Sbjct: 363 ggggaggttga 353
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| || |||| |||||||||| ||||||||||||||||||||| || Sbjct: 390 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 331 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||| | || |||||| || | || | |||||||||| ||||| Sbjct: 330 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgca 283
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 299 tgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggatgggga 358 |||||||||| || |||| |||||||||| ||||||||||||||||||||| || ||||| Sbjct: 385 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 326 Query: 359 ggttgatgtggatgcc 374 |||||| || |||||| Sbjct: 325 ggttgaggttgatgcc 310
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 299 tgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggatgggga 358 |||||||||| || |||| |||||||||| ||||||||||||||||||||| || ||||| Sbjct: 460 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 401 Query: 359 ggttgatgtggatgcc 374 |||||| || |||||| Sbjct: 400 ggttgaggttgatgcc 385
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| || |||| |||||||||| ||||||||||||||||||||| || Sbjct: 147637 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 147578 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||| | || |||||| || | || | |||||||||| ||||| Sbjct: 147577 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgca 147530 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 299 tgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggatgggga 358 |||||||||| || |||| |||||||||| ||||||||||||||||||||| || ||||| Sbjct: 144432 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 144373 Query: 359 ggttgatgtggatgcc 374 |||||| || |||||| Sbjct: 144372 ggttgaggttgatgcc 144357
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 87.7 bits (44), Expect = 3e-14 Identities = 92/108 (85%) Strand = Plus / Minus Query: 294 gcacatgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggat 353 |||| |||||||||| || |||| |||||||||| ||||||||||||||||||||| || Sbjct: 27717011 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 27716952 Query: 354 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||||||| | || |||||| || | || | |||||||||| ||||| Sbjct: 27716951 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgca 27716904 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 299 tgaagccggtcgggacgcccttgccgcagaagttgaggatgaggctgaggtggatgggga 358 |||||||||| || |||| |||||||||| ||||||||||||||||||||| || ||||| Sbjct: 27713806 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 27713747 Query: 359 ggttgatgtggatgcc 374 |||||| || |||||| Sbjct: 27713746 ggttgaggttgatgcc 27713731
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 342 cttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgag 283 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||| ||||||||| Sbjct: 282 cacgttggccttgacggcggtgca 259
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || |||||||| || | |||||| || Sbjct: 427 cttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgag 368 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||| ||||||||| Sbjct: 367 cacgttggccttgacggcggtgca 344
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 79.8 bits (40), Expect = 6e-12 Identities = 73/84 (86%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| |||||||||||| | || |||||| || Sbjct: 439 cttgccgcagttgttgaggatgaggctgaggtcgatggggaggttaaggttgatgccgag 380 Query: 378 cacgtcggccttgatggcggtgca 401 | || |||||||| ||||||||| Sbjct: 379 gatgttggccttgacggcggtgca 356
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 189908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 189849 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 189848 ggccttgatggcggtgca 189831 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 gccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 374 ||||||| |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 198932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 198879
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 26975 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 26916 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 26915 ggccttgatggcggtgca 26898 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 gccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 374 ||||||| |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 35999 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 35946
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 123908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 123849 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 123848 ggccttgatggcggtgca 123831 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 gccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 374 ||||||| |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 132932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 132879
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 189908 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 189849 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 189848 ggccttgatggcggtgca 189831 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 321 gccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 374 ||||||| |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 198932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 198879
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 72746 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 72805 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 72806 ggccttgatggcggtgca 72823 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 321 gccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 374 ||||||| |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 63724 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 63777
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 324 gcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtc 383 |||| ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| Sbjct: 480 gcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgtt 421 Query: 384 ggccttgatggcggtgca 401 |||||||||||||||||| Sbjct: 420 ggccttgatggcggtgca 403
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 440 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 381 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 380 cacgttggccttgatggcggtgca 357
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 357 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 298 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 297 gacggcggtgca 286
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 440 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 381 Query: 378 cacgtcggccttgatggcggtgca 401 ||||| |||||||||||||||||| Sbjct: 380 cacgttggccttgatggcggtgca 357
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 63.9 bits (32), Expect = 4e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 310 gggacgcccttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtgg 369 ||||||| | |||||||| |||||| || ||||||||||| |||||| ||||||| || | Sbjct: 549 gggacgcgcctgccgcagtagttgacgaggaggctgaggttgatgggcaggttgaggttg 490 Query: 370 atgcctagcacgtcggccttgatggcggtgca 401 ||||| || |||| |||| ||| | ||||||| Sbjct: 489 atgcccaggacgttggccctgaggacggtgca 458
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 60.0 bits (30), Expect = 6e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 320 tgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagca 379 |||||||| ||||||||||||| ||||| | ||| | ||||| ||||||||| || | Sbjct: 437 tgccgcagttgttgaggatgaggttgaggctaaggggcacgttgaggtggatgccgagga 378 Query: 380 cgtcggccttgatggcggtgca 401 ||| |||||||||||||||||| Sbjct: 377 cgttggccttgatggcggtgca 356
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 58.0 bits (29), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatg---cc 374 |||||||||| |||||||||||||||||| | || ||||| ||||| || |||| || Sbjct: 402 cttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatccc 343 Query: 375 tagcacgtcggccttgatggcggtgca 401 || |||| |||||||||||||||||| Sbjct: 342 aagaacgttggccttgatggcggtgca 316
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 58.0 bits (29), Expect = 2e-05 Identities = 73/87 (83%), Gaps = 3/87 (3%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatg---cc 374 |||||||||| |||||||||||||||||| | || ||||| ||||| || |||| || Sbjct: 481 cttgccgcagttgttgaggatgaggctgagatcgacggggatgttgaggttgatgatccc 422 Query: 375 tagcacgtcggccttgatggcggtgca 401 || |||| |||||||||||||||||| Sbjct: 421 aagaacgttggccttgatggcggtgca 395
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 357 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 298 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 297 gacggcggtgca 286
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 56.0 bits (28), Expect = 9e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| |||||||||||||||||||| || ||| ||||||| | ||| || || Sbjct: 444 cttgccgcagtggttgaggatgaggctgaggtcgacgggcaggttgagcttgattccgag 385 Query: 378 cacgtcggccttgatggcggtgca 401 || || |||||||||||||||| Sbjct: 384 gacctctcccttgatggcggtgca 361
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 56.0 bits (28), Expect = 9e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 318 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 377 |||||||||| ||||||||||||| ||||| | ||| | |||| ||||||||| || Sbjct: 445 cttgccgcagttgttgaggatgaggttgaggctaaggggcatattgaggtggatgccgag 386 Query: 378 cacgtcggccttgatggcggtgca 401 |||| |||||||||||||||||| Sbjct: 385 gacgttggccttgatggcggtgca 362
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Minus Query: 360 gttgatgtggatgcctagcacgtcggccttgatggcggtgca 401 ||||| ||||||||| || |||| |||||||||||||||||| Sbjct: 335 gttgaggtggatgccgaggacgttggccttgatggcggtgca 294
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Minus Query: 320 tgccgcagaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagca 379 |||||||| ||||||||||||| ||||| | ||| | || || ||||||||| || | Sbjct: 450 tgccgcagttgttgaggatgaggttgaggctaaggggcacgtggaggtggatgccgagga 391 Query: 380 cgtcggccttgatggcggtgca 401 ||| |||||||||||||||||| Sbjct: 390 cgttggccttgatggcggtgca 369
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 48.1 bits (24), Expect = 0.022 Identities = 60/72 (83%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 372 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 313 Query: 390 gatggcggtgca 401 || ||||||||| Sbjct: 312 gacggcggtgca 301
>emb|BX323057.3| Human DNA sequence from clone RP11-954J6 on chromosome X Contains the 5' end of the TMLHE gene epsilon trimethyllysine hydroxylase, the 3' end of a novel gene and a CpG island, complete sequence Length = 79439 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 ttcaaaattcaataattaggaaa 34 ||||||||||||||||||||||| Sbjct: 54058 ttcaaaattcaataattaggaaa 54036
>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 193425 Score = 46.1 bits (23), Expect = 0.088 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 13 tcaaaattcaataattaggaaaacataattt 43 ||||||||||||||||| ||||||||||||| Sbjct: 62080 tcaaaattcaataatta-gaaaacataattt 62109
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 137 aaacaatacaaaacaactaaagcaaagcaaa 167 |||||| |||||||||| ||||||||||||| Sbjct: 3653 aaacaaaacaaaacaacaaaagcaaagcaaa 3683
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 137 aaacaatacaaaacaactaaagcaaagcaaa 167 |||||| |||||||||| ||||||||||||| Sbjct: 71203 aaacaaaacaaaacaacaaaagcaaagcaaa 71233
>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2 Length = 240000 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 12 ttcaaaattcaataattaggaaa 34 ||||||||||||||||||||||| Sbjct: 19308 ttcaaaattcaataattaggaaa 19286
>emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from BAC 139I22 map 3q21 region D3S3607-D3S1587, complete sequence Length = 184983 Score = 46.1 bits (23), Expect = 0.088 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Plus Query: 13 tcaaaattcaataattaggaaaacataattt 43 ||||||||||||||||| ||||||||||||| Sbjct: 39619 tcaaaattcaataatta-gaaaacataattt 39648
>emb|CT574593.2| Pan troglodytes chromosome X clone RP43-059H19 map Xq28, complete sequence Length = 151142 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 12 ttcaaaattcaataattaggaaa 34 ||||||||||||||||||||||| Sbjct: 113301 ttcaaaattcaataattaggaaa 113323
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 aaacaatacaaaacaactaaagcaaagcaaa 167 |||||| |||||||||| ||||||||||||| Sbjct: 8499 aaacaaaacaaaacaacaaaagcaaagcaaa 8469
>emb|AL845455.7| Mouse DNA sequence from clone RP23-325E4 on chromosome 2, complete sequence Length = 143689 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 234 ccccttttctttgtgggagatca 256 ||||||||||||||||||||||| Sbjct: 49671 ccccttttctttgtgggagatca 49649
>gb|AE014309.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 6 of 11 of the complete sequence Length = 250029 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 taaagcaaagcaaataattgaa 175 |||||||||||||||||||||| Sbjct: 101057 taaagcaaagcaaataattgaa 101078
>ref|XM_644188.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (324.t00005) partial mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 aaagcaaagcaaataattgaac 176 |||||||||||||||||||||| Sbjct: 295 aaagcaaagcaaataattgaac 316
>ref|XM_644246.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (315.t00009) partial mRNA Length = 849 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 aaagcaaagcaaataattgaac 176 |||||||||||||||||||||| Sbjct: 295 aaagcaaagcaaataattgaac 316
>ref|XM_645518.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (208.t00001) partial mRNA Length = 1953 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 155 aaagcaaagcaaataattgaac 176 |||||||||||||||||||||| Sbjct: 73 aaagcaaagcaaataattgaac 94
>emb|AL603713.6| Human DNA sequence from clone RP11-17C16 on chromosome 13, complete sequence Length = 83989 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 taaagcaaagcaaataattgaa 175 |||||||||||||||||||||| Sbjct: 79702 taaagcaaagcaaataattgaa 79723
>gb|AY105945.1| Zea mays PCO115682 mRNA sequence Length = 947 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 ggccttgatggcggtgcaaagg 405 |||||||||||||||||||||| Sbjct: 557 ggccttgatggcggtgcaaagg 536
>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence Length = 185417 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gtggatggggaggttgatgtggatg 372 ||||||||||| ||||||||||||| Sbjct: 19421 gtggatggggatgttgatgtggatg 19445
>gb|AC101915.7| Mus musculus chromosome 1, clone RP24-388P13, complete sequence Length = 207724 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 aggaaaacataatttgtcacgataa 53 ||||||||||||||||||| ||||| Sbjct: 86700 aggaaaacataatttgtcatgataa 86724
>ref|XM_745244.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g05870) partial mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 aggtggatggggaggttgatg 366 ||||||||||||||||||||| Sbjct: 719 aggtggatggggaggttgatg 739
>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence Length = 245991 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 aaacaactaaagcaaagcaaa 167 ||||||||||||||||||||| Sbjct: 97992 aaacaactaaagcaaagcaaa 97972
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR04A24, complete sequence Length = 166677 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gtggatggggaggttgatgtggatg 372 ||||||||||| ||||||||||||| Sbjct: 24856 gtggatggggatgttgatgtggatg 24880
>gb|AC084866.5| Homo sapiens BAC clone RP11-6E9 from 4, complete sequence Length = 196852 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ggatgaggctgaggtggatgg 355 ||||||||||||||||||||| Sbjct: 109562 ggatgaggctgaggtggatgg 109582
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 230 gcatccccttttctttgtgggagat 254 |||||||||||||||||| |||||| Sbjct: 113520 gcatccccttttctttgtaggagat 113544
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gtggatggggaggttgatgtggatg 372 ||||||||||| ||||||||||||| Sbjct: 53014 gtggatggggatgttgatgtggatg 53038
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054 (D135)), complete sequence Length = 81053 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gtggatggggaggttgatgtggatg 372 ||||||||||| ||||||||||||| Sbjct: 2382 gtggatggggatgttgatgtggatg 2406
>gb|AC004115.1|AC004115 Drosophila melanogaster (P1 DS02374 (D136)) DNA sequence, complete sequence Length = 80101 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 gtggatggggaggttgatgtggatg 372 ||||||||||| ||||||||||||| Sbjct: 79878 gtggatggggatgttgatgtggatg 79902
>gb|AC153551.4| Mus musculus 10 BAC RP23-383A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216106 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 143 tacaaaacaactaaagcaaagcaaa 167 ||||||||||| ||||||||||||| Sbjct: 85653 tacaaaacaacaaaagcaaagcaaa 85629
>gb|BC085504.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:6404318), partial cds Length = 2687 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1604 gaggatgaggctgaggtgga 1585
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 402 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 343 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 342 cacggcggtgca 331
>ref|XM_516360.1| PREDICTED: Pan troglodytes similar to KIAA0342 protein (LOC460261), mRNA Length = 3315 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 3025 gaggctgaggtggatgggga 3044
>gb|AC009341.7| Drosophila melanogaster clone BACR07G13, complete sequence Length = 183723 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atgcatgcatgacatggacg 220 |||||||||||||||||||| Sbjct: 90416 atgcatgcatgacatggacg 90397
>gb|AY673603.1| Homo sapiens matrix metalloproteinase 20 (enamelysin) (MMP20) gene, complete cds Length = 52428 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 33858 cccttttctttgtgggagat 33877
>gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromosome unknown, complete sequence Length = 194692 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acaatacaaaacaactaaag 158 |||||||||||||||||||| Sbjct: 120651 acaatacaaaacaactaaag 120632
>ref|XM_705670.1| Candida albicans SC5314 hypothetical protein (CaO19.9398), mRNA Length = 672 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tgcatctttcaaaattcaat 24 |||||||||||||||||||| Sbjct: 30 tgcatctttcaaaattcaat 49
>ref|XM_705632.1| Candida albicans SC5314 hypothetical protein (CaO19.1840), mRNA Length = 672 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tgcatctttcaaaattcaat 24 |||||||||||||||||||| Sbjct: 30 tgcatctttcaaaattcaat 49
>ref|XM_813626.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511725.80) partial mRNA Length = 6783 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aaagtaaaatgcaatggcca 106 |||||||||||||||||||| Sbjct: 2076 aaagtaaaatgcaatggcca 2057
>ref|XM_446736.1| Candida glabrata CBS138, CAGL0G08602g partial mRNA Length = 2793 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gataacaacaccaacaacaa 68 |||||||||||||||||||| Sbjct: 328 gataacaacaccaacaacaa 347
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence Length = 209936 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ttcaataattaggaaaacat 38 |||||||||||||||||||| Sbjct: 105449 ttcaataattaggaaaacat 105468
>ref|XM_849546.1| PREDICTED: Canis familiaris similar to matrix metalloproteinase 20 preproprotein (LOC611829), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1217 cccttttctttgtgggagat 1236
>ref|XM_536408.2| PREDICTED: Canis familiaris similar to Growth hormone inducible transmembrane protein (Dermal papilla derived protein 2), transcript variant 1 (LOC479266), mRNA Length = 2436 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 caaaattcaataattaggaa 33 |||||||||||||||||||| Sbjct: 1954 caaaattcaataattaggaa 1935
>ref|XM_846854.1| PREDICTED: Canis familiaris similar to Growth hormone inducible transmembrane protein (Dermal papilla derived protein 2), transcript variant 3 (LOC479266), mRNA Length = 2525 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 caaaattcaataattaggaa 33 |||||||||||||||||||| Sbjct: 2043 caaaattcaataattaggaa 2024
>gb|AC149303.10| Medicago truncatula clone mth2-76a20, complete sequence Length = 141028 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataacaacaccaacaacaag 69 |||||||||||||||||||| Sbjct: 73088 ataacaacaccaacaacaag 73107
>ref|NM_174391.2| Bos taurus matrix metalloproteinase 20 (enamelysin) (MMP20), mRNA Length = 2123 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1215 cccttttctttgtgggagat 1234
>emb|AL442643.2| Human DNA sequence from clone RP11-564H19 on chromosome 13, complete sequence Length = 167477 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctttcaaaattcaataatta 29 |||||||||||||||||||| Sbjct: 58965 ctttcaaaattcaataatta 58984
>emb|AL138680.15| Human DNA sequence from clone RP11-110K8 on chromosome 13 Contains the 5' end of the EFHA1 gene for EF hand domain family, member A1, a farnesyltransferase, CAAX box, alpha (FNTA)(FPTA, PGGT1A) pseudogene and a CpG island, complete sequence Length = 95093 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 aaagcaaataattgaacgta 179 |||||||||||||||||||| Sbjct: 60118 aaagcaaataattgaacgta 60099
>emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin Length = 1674 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>gb|BC099678.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:106088 IMAGE:6311681), complete cds Length = 2800 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1667 gaggatgaggctgaggtgga 1648
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 gataacaacaccaacaacaa 68 |||||||||||||||||||| Sbjct: 808682 gataacaacaccaacaacaa 808701
>ref|NM_004771.3| Homo sapiens matrix metallopeptidase 20 (enamelysin) (MMP20), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>emb|AJ748324.1| Sulfolobus islandicus plasmid pHVE14 Length = 35422 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aattaggaaaacataatttg 44 |||||||||||||||||||| Sbjct: 6423 aattaggaaaacataatttg 6404
>emb|AJ748321.1| Sulfolobus islandicus plasmid pKEF9 Length = 28930 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aattaggaaaacataatttg 44 |||||||||||||||||||| Sbjct: 6403 aattaggaaaacataatttg 6384
>gb|BC025496.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:38107 IMAGE:5320239), complete cds Length = 2705 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1641 gaggatgaggctgaggtgga 1622
>gb|AC025035.15| Homo sapiens 12 BAC RP11-121E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165440 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ctttcaaaattcaataattaggaa 33 ||||||||||||||| |||||||| Sbjct: 163513 ctttcaaaattcaattattaggaa 163490
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aagcaaagcaaataattgaa 175 |||||||||||||||||||| Sbjct: 173038 aagcaaagcaaataattgaa 173057
>gb|AC146333.35| Medicago truncatula clone mth2-8d3, complete sequence Length = 122694 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 tatgcatctttcaaaattca 22 |||||||||||||||||||| Sbjct: 59634 tatgcatctttcaaaattca 59615
>dbj|AK096678.1| Homo sapiens cDNA FLJ39359 fis, clone PEBLM2004290 Length = 2439 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 1612 gaggctgaggtggatgggga 1631
>gb|AC090016.11| Homo sapiens 12q BAC RP11-730K16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 121817 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 ctttcaaaattcaataattaggaa 33 ||||||||||||||| |||||||| Sbjct: 79 ctttcaaaattcaattattaggaa 56
>dbj|AK145193.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930017D13 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2773 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1723 gaggatgaggctgaggtgga 1704
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 162399 gaggctgaggtggatgggga 162380
>gb|AC021678.13| Homo sapiens chromosome 8, clone RP11-380I10, complete sequence Length = 181731 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 taattaggaaaacataatttgtca 47 ||||||||||||||||||| |||| Sbjct: 61 taattaggaaaacataattggtca 38
>dbj|AK154965.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113D13 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2723 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1669 gaggatgaggctgaggtgga 1650
>ref|XM_940627.1| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10713 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 4231 gaggctgaggtggatgggga 4250
>ref|XM_047357.5| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10839 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 4357 gaggctgaggtggatgggga 4376
>dbj|AK159315.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015I18 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1670 gaggatgaggctgaggtgga 1651
>dbj|AK159310.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015H08 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2685 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1629 gaggatgaggctgaggtgga 1610
>dbj|AK155342.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630221F09 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>gb|AC019031.7| Homo sapiens chromosome 8, clone RP11-563O19, complete sequence Length = 157076 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 taattaggaaaacataatttgtca 47 ||||||||||||||||||| |||| Sbjct: 8159 taattaggaaaacataattggtca 8182
>dbj|AK160891.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732415E22 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1677 gaggatgaggctgaggtgga 1658
>dbj|AK154178.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630006K22 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 4655 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1770 gaggatgaggctgaggtgga 1751
>dbj|AK170371.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101H10 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2715 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1666 gaggatgaggctgaggtgga 1647
>gb|BC024586.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:5066189), partial cds Length = 1986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 916 gaggatgaggctgaggtgga 897
>gb|BC036169.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:4987705), partial cds Length = 2191 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1127 gaggatgaggctgaggtgga 1108
>dbj|AK034795.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430039M12 product:SYNAPTIC VESICLE MEMBRANE PROTEIN VAT-1 HOMOLOG (FRAGMENT), full insert sequence Length = 2735 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>emb|BX470224.5| Zebrafish DNA sequence from clone DKEY-13N15 in linkage group 5, complete sequence Length = 244492 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 aaattcaataattaggaaaa 35 |||||||||||||||||||| Sbjct: 33705 aaattcaataattaggaaaa 33686
>ref|XM_394624.2| PREDICTED: Apis mellifera similar to ENSANGP00000020463 (LOC411150), mRNA Length = 2127 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aacaacaccaacaacaagcg 71 |||||||||||||||||||| Sbjct: 1271 aacaacaccaacaacaagcg 1290
>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence Length = 169313 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 5500 gaggctgaggtggatgggga 5481
>ref|NM_213905.1| Sus scrofa matrix metalloproteinase (MMP20), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>gb|AC000066.1|AC000066 Homo sapiens BAC clone CTA-293F11 from 7q21-7q22, complete sequence Length = 94960 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acaatacaaaacaactaaag 158 |||||||||||||||||||| Sbjct: 81071 acaatacaaaacaactaaag 81052
>emb|AJ010770.1|HSA010770 Homo sapiens hyperion gene, exons 1-50 Length = 170008 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acaatacaaaacaactaaag 158 |||||||||||||||||||| Sbjct: 95180 acaatacaaaacaactaaag 95161
>gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete sequence Length = 258558 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 atgcatgcatgacatggacg 220 |||||||||||||||||||| Sbjct: 79305 atgcatgcatgacatggacg 79286
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 aagcaaagcaaataattgaa 175 |||||||||||||||||||| Sbjct: 232167 aagcaaagcaaataattgaa 232186
>dbj|AP000851.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-817J15, complete sequences Length = 172981 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 46569 cccttttctttgtgggagat 46550
>emb|CT010588.10| Mouse DNA sequence from clone RP23-150H18 on chromosome 12, complete sequence Length = 158004 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 atcatgcatgcatgacatgg 217 |||||||||||||||||||| Sbjct: 60838 atcatgcatgcatgacatgg 60857
>ref|NM_012037.1| Mus musculus vesicle amine transport protein 1 homolog (T californica) (Vat1), mRNA Length = 2735 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase precursor mRNA, complete cds Length = 2123 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1215 cccttttctttgtgggagat 1234
>gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mRNA, complete cds Length = 3424 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cccttttctttgtgggagat 254 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>gb|AC115744.9| Mus musculus chromosome 12, clone RP23-479M19, complete sequence Length = 211776 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 atcatgcatgcatgacatgg 217 |||||||||||||||||||| Sbjct: 118751 atcatgcatgcatgacatgg 118770
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 2058 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 1999 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 1998 cacggcggtgca 1987
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 40.1 bits (20), Expect = 5.4 Identities = 59/72 (81%) Strand = Plus / Minus Query: 330 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 389 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 446 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 387 Query: 390 gatggcggtgca 401 | ||||||||| Sbjct: 386 cacggcggtgca 375
>emb|AL590996.12| Mouse DNA sequence from clone RP23-328K2 on chromosome 11, complete sequence Length = 139242 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gaggatgaggctgaggtgga 352 |||||||||||||||||||| Sbjct: 38533 gaggatgaggctgaggtgga 38552
>dbj|AB002340.3| Homo sapiens mRNA for KIAA0342 protein, partial cds Length = 8859 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gaggctgaggtggatgggga 358 |||||||||||||||||||| Sbjct: 2374 gaggctgaggtggatgggga 2393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,186,920 Number of Sequences: 3902068 Number of extensions: 4186920 Number of successful extensions: 107264 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 106804 Number of HSP's gapped (non-prelim): 454 length of query: 405 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 383 effective length of database: 17,147,199,772 effective search space: 6567377512676 effective search space used: 6567377512676 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)