Clone Name | rbart57f03 |
---|---|
Clone Library Name | barley_pub |
>SURE_HELPY (O25584) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 267 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 145 ESRHYKIALGCPDDILWIALMILNSAVVKRNVLCNLHCPTSRGASTIHISSFSGPLE 315 E RHY+I G P D +++A+ L V V+ ++ ++ G TI+ + +G +E Sbjct: 61 EGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIE 117
>SURE_HELPJ (Q9ZKS0) 5'-nucleotidase surE (EC 3.1.3.5) (Nucleoside| 5'-monophosphate phosphohydrolase) Length = 267 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/57 (29%), Positives = 31/57 (54%) Frame = +1 Query: 145 ESRHYKIALGCPDDILWIALMILNSAVVKRNVLCNLHCPTSRGASTIHISSFSGPLE 315 E RHY+I G P D +++A+ L V V+ ++ ++ G TI+ + +G +E Sbjct: 61 EGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIE 117
>RTX1B_ACTPL (P26760) Toxin RTX-I translocation ATP-binding protein (RTX-I toxin| determinant B) (APX-IB) (HLY-IB) (Cytolysin IB) (CLY-IB) Length = 707 Score = 30.0 bits (66), Expect = 1.4 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = +1 Query: 40 VMGSTSIHMGWFRFLSPLLRKK 105 ++GS +MGW F+SP+LR++ Sbjct: 297 ILGSLPFYMGWSIFISPILRRR 318
>GMHA_SYNY3 (Q55797) Phosphoheptose isomerase (EC 5.3.1.-) (Sedoheptulose| 7-phosphate isomerase) Length = 194 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +1 Query: 166 ALGCPDDILWIALMILNSAVVKRNVLCNLHCPTSRGASTIHISSFSGPL 312 ALG P DILW L+++ NVL L C +G TI ++ +G L Sbjct: 102 ALGQPGDILW----GLSTSGKSTNVLHALKCAKDKGLHTIGMAGNNGGL 146
>PCX_DROME (P18490) Protein pecanex| Length = 3433 Score = 27.7 bits (60), Expect = 7.1 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Frame = +1 Query: 37 YVMGSTSIHMGWFRFLSPLLRKKWVY*LYLRCKIPPESRHYKIALGCPDDILWIALMILN 216 Y++ HM W F PLLR++ E +++ L P I+W + + Sbjct: 1873 YIVPQMRKHMPWLCFSRPLLRQR-------------EFGQFEV-LNAP-KIMWFEKLYIY 1917 Query: 217 SAVVKRNVLCNLHCPTSRGA-STIHISSFSGP 309 +V++RNVL L +S A S + ++ F P Sbjct: 1918 LSVLERNVLFPLLAISSLTADSQLIVAKFGLP 1949
>CYF_CYAPA (P48123) Apocytochrome f precursor| Length = 321 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = +1 Query: 259 PTSRGASTIHISSFSGPLEVFGILMLP 339 P +GA I + GPL V +LMLP Sbjct: 89 PIDKGAQQIQANGQKGPLNVGAVLMLP 115
>SHBG_RABIT (P15196) Sex hormone-binding globulin precursor (SHBG) (Sex| steroid-binding protein) (SBP) (Testis-specific androgen-binding protein) (ABP) Length = 398 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 106 WVY*LYLRCKIPPESRHYKIALGCPDDILWIALMILNSAVV 228 W + L L K P E +ALG P+D W++L + + VV Sbjct: 244 WAFSLDLELK-PSEGSGRLLALGTPEDPNWLSLHLQDQKVV 283 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,608,179 Number of Sequences: 219361 Number of extensions: 1175061 Number of successful extensions: 2517 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2516 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)