ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
2gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b0... 84 4e-13
3gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 2e-08
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
6gb|DQ463008.1| Sorghum bicolor cultivar inbred line PI302233 DNA... 62 1e-06
7gb|DQ463007.1| Sorghum bicolor cultivar inbred line LWA88 DNAJ d... 62 1e-06
8gb|DQ463006.1| Sorghum bicolor cultivar inbred line LWA67 DNAJ d... 62 1e-06
9gb|DQ463005.1| Sorghum bicolor cultivar inbred line LWA63 DNAJ d... 62 1e-06
10gb|DQ463004.1| Sorghum bicolor cultivar inbred line LWA59 DNAJ d... 62 1e-06
11gb|DQ463003.1| Sorghum bicolor cultivar inbred line LWA55 DNAJ d... 62 1e-06
12gb|DQ463002.1| Sorghum bicolor cultivar inbred line LWA42 DNAJ d... 62 1e-06
13gb|DQ463001.1| Sorghum bicolor cultivar inbred line LWA38 DNAJ d... 62 1e-06
14gb|DQ463000.1| Sorghum bicolor cultivar inbred line LWA29 DNAJ d... 62 1e-06
15gb|DQ462999.1| Sorghum bicolor cultivar inbred line LWA22 DNAJ d... 62 1e-06
16gb|DQ462998.1| Sorghum bicolor cultivar inbred line LWA17 DNAJ d... 62 1e-06
17gb|DQ462997.1| Sorghum bicolor cultivar inbred line LWA15 DNAJ d... 62 1e-06
18gb|DQ462996.1| Sorghum bicolor cultivar inbred line LWA13 DNAJ d... 62 1e-06
19gb|DQ462995.1| Sorghum bicolor cultivar inbred line PI585454 DNA... 62 1e-06
20gb|DQ462994.1| Sorghum bicolor cultivar inbred line PI267539 DNA... 62 1e-06
21gb|DQ462993.1| Sorghum bicolor cultivar inbred line PI267408 DNA... 62 1e-06
22gb|DQ462992.1| Sorghum bicolor cultivar inbred line PI221607 DNA... 62 1e-06
23gb|DQ462991.1| Sorghum bicolor cultivar inbred line PI152702 DNA... 62 1e-06
24gb|DQ462990.1| Sorghum bicolor cultivar inbred line NSL92371 DNA... 62 1e-06
25gb|DQ462989.1| Sorghum bicolor cultivar inbred line NSL87902 DNA... 62 1e-06
26gb|DQ462988.1| Sorghum bicolor cultivar inbred line NSL87666 DNA... 62 1e-06
27gb|DQ462987.1| Sorghum bicolor cultivar inbred line NSL77217 DNA... 62 1e-06
28gb|DQ462986.1| Sorghum bicolor cultivar inbred line NSL77034 DNA... 62 1e-06
29gb|DQ462985.1| Sorghum bicolor cultivar inbred line NSL56174 DNA... 62 1e-06
30gb|DQ462984.1| Sorghum bicolor cultivar inbred line NSL56003 DNA... 62 1e-06
31gb|DQ462983.1| Sorghum bicolor cultivar inbred line NSL55243 DNA... 62 1e-06
32gb|DQ462982.1| Sorghum bicolor cultivar inbred line NSL51365 DNA... 62 1e-06
33gb|DQ462981.1| Sorghum bicolor cultivar inbred line NSL51030 DNA... 62 1e-06
34gb|DQ462980.1| Sorghum bicolor cultivar inbred line NSL50875 DNA... 62 1e-06
35gb|DQ462979.1| Sorghum bicolor cultivar inbred line BTx623 DNAJ ... 62 1e-06
36gb|DQ463009.1| Sorghum propinquum DNAJ domain protein gene, exon... 56 8e-05
37emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 i... 44 0.32
38gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosom... 42 1.3
39gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 42 1.3
40ref|NM_190007.1| Oryza sativa (japonica cultivar-group), predic... 40 5.0
41ref|XM_717457.1| Candida albicans SC5314 putative patatin-like p... 40 5.0
42ref|XM_717319.1| Candida albicans SC5314 putative patatin-like p... 40 5.0
43gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosom... 40 5.0
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
45dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.0
46dbj|AK120263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.0
47emb|AL670941.11| Mouse DNA sequence from clone RP23-291M22 on ch... 40 5.0 
>dbj|AK068822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168H14, full
           insert sequence
          Length = 1217

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                       
Query: 293 cttccttttctgggcctcttgaagtttttggaatactgatgcttccaaatcgctgaaccc 352
           |||||||||||| ||||||||||||||  ||||||||||||||||||||||  |||| ||
Sbjct: 928 cttccttttctgagcctcttgaagtttacggaatactgatgcttccaaatcattgaatcc 869

                               
Query: 353 agttccatcaatggtgcttg 372
           ||||||| ||| | ||||||
Sbjct: 868 agttccaccaaggttgcttg 849
to top
>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence
          Length = 112592

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                          
Query: 307    cctcttgaagtttttggaatactgatgcttccaaatcgctgaacccagttccatcaatgg 366
              |||||||||||||| |||| || ||||||||||||||||| || ||||||||||||||| 
Sbjct: 101364 cctcttgaagttttcggaacaccgatgcttccaaatcgctaaatccagttccatcaatgt 101305

                    
Query: 367    tgcttg 372
              ||||||
Sbjct: 101304 tgcttg 101299
to top
>gb|AC118132.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0003A09, complete sequence
          Length = 167222

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 307   cctcttgaagtttttggaatactgatgcttccaaatcgctgaacccagttccatcaatgg 366
             |||||||||||||  ||||||||||||||||||||||  |||| ||||||||| ||| | 
Sbjct: 38496 cctcttgaagtttacggaatactgatgcttccaaatcattgaatccagttccaccaaggt 38555

                   
Query: 367   tgcttg 372
             ||||||
Sbjct: 38556 tgcttg 38561
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 307     cctcttgaagtttttggaatactgatgcttccaaatcgctgaacccagttccatcaatgg 366
               |||||||||||||  ||||||||||||||||||||||  |||| ||||||||| ||| | 
Sbjct: 1999735 cctcttgaagtttacggaatactgatgcttccaaatcattgaatccagttccaccaaggt 1999794

                     
Query: 367     tgcttg 372
               ||||||
Sbjct: 1999795 tgcttg 1999800
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 307     cctcttgaagtttttggaatactgatgcttccaaatcgctgaacccagttccatcaatgg 366
               |||||||||||||  ||||||||||||||||||||||  |||| ||||||||| ||| | 
Sbjct: 1999747 cctcttgaagtttacggaatactgatgcttccaaatcattgaatccagttccaccaaggt 1999806

                     
Query: 367     tgcttg 372
               ||||||
Sbjct: 1999807 tgcttg 1999812
to top
>gb|DQ463008.1| Sorghum bicolor cultivar inbred line PI302233 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463007.1| Sorghum bicolor cultivar inbred line LWA88 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463006.1| Sorghum bicolor cultivar inbred line LWA67 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463005.1| Sorghum bicolor cultivar inbred line LWA63 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463004.1| Sorghum bicolor cultivar inbred line LWA59 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463003.1| Sorghum bicolor cultivar inbred line LWA55 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463002.1| Sorghum bicolor cultivar inbred line LWA42 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463001.1| Sorghum bicolor cultivar inbred line LWA38 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463000.1| Sorghum bicolor cultivar inbred line LWA29 DNAJ domain protein
           gene, exons and partial cds
          Length = 869

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 860 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 818
to top
>gb|DQ462999.1| Sorghum bicolor cultivar inbred line LWA22 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462998.1| Sorghum bicolor cultivar inbred line LWA17 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462997.1| Sorghum bicolor cultivar inbred line LWA15 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462996.1| Sorghum bicolor cultivar inbred line LWA13 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462995.1| Sorghum bicolor cultivar inbred line PI585454 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462994.1| Sorghum bicolor cultivar inbred line PI267539 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462993.1| Sorghum bicolor cultivar inbred line PI267408 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462992.1| Sorghum bicolor cultivar inbred line PI221607 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462991.1| Sorghum bicolor cultivar inbred line PI152702 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462990.1| Sorghum bicolor cultivar inbred line NSL92371 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462989.1| Sorghum bicolor cultivar inbred line NSL87902 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462988.1| Sorghum bicolor cultivar inbred line NSL87666 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462987.1| Sorghum bicolor cultivar inbred line NSL77217 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462986.1| Sorghum bicolor cultivar inbred line NSL77034 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462985.1| Sorghum bicolor cultivar inbred line NSL56174 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462984.1| Sorghum bicolor cultivar inbred line NSL56003 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462983.1| Sorghum bicolor cultivar inbred line NSL55243 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462982.1| Sorghum bicolor cultivar inbred line NSL51365 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462981.1| Sorghum bicolor cultivar inbred line NSL51030 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462980.1| Sorghum bicolor cultivar inbred line NSL50875 DNAJ domain protein
           gene, exons and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ462979.1| Sorghum bicolor cultivar inbred line BTx623 DNAJ domain protein
           gene, exons 2, 3 and partial cds
          Length = 867

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 330 gatgcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 858 gatgcttccaaatcgctaaatccagttccatcaatgttgcttg 816
to top
>gb|DQ463009.1| Sorghum propinquum DNAJ domain protein gene, exons and partial cds
          Length = 876

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 333 gcttccaaatcgctgaacccagttccatcaatggtgcttg 372
           |||||||||||||| || ||||||||||||||| ||||||
Sbjct: 864 gcttccaaatcgctaaatccagttccatcaatgctgcttg 825
to top
>emb|BX005161.6| Zebrafish DNA sequence from clone CH211-168N16 in linkage group 20,
             complete sequence
          Length = 150884

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    tgtgatgggaagcacaagtatc 60
             ||||||||||||||||||||||
Sbjct: 52803 tgtgatgggaagcacaagtatc 52824
to top
>gb|AC163742.4| Mus musculus BAC clone RP23-383K19 from chromosome 14, complete sequence
          Length = 199109

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 46     ggaagcacaagtatccatatg 66
              |||||||||||||||||||||
Sbjct: 136128 ggaagcacaagtatccatatg 136108
to top
>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 196     attgccctgatgatactcaac 216
               |||||||||||||||||||||
Sbjct: 1802211 attgccctgatgatactcaac 1802231
to top
>ref|NM_190007.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 cacatttcttccttttctgg 305
           ||||||||||||||||||||
Sbjct: 808 cacatttcttccttttctgg 789
to top
>ref|XM_717457.1| Candida albicans SC5314 putative patatin-like phospholipase
           (CaO19_1504), mRNA
          Length = 2562

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  tcgtttcctttcacctctcc 94
           ||||||||||||||||||||
Sbjct: 741 tcgtttcctttcacctctcc 722
to top
>ref|XM_717319.1| Candida albicans SC5314 putative patatin-like phospholipase
           (CaO19_9080), mRNA
          Length = 2565

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 75  tcgtttcctttcacctctcc 94
           ||||||||||||||||||||
Sbjct: 741 tcgtttcctttcacctctcc 722
to top
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete
            sequence
          Length = 166272

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ccacatttcttccttttctg 304
            ||||||||||||||||||||
Sbjct: 2120 ccacatttcttccttttctg 2139
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      cacatttcttccttttctgg 305
                ||||||||||||||||||||
Sbjct: 40786603 cacatttcttccttttctgg 40786584
to top
>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   cacatttcttccttttctgg 305
             ||||||||||||||||||||
Sbjct: 89249 cacatttcttccttttctgg 89230
to top
>dbj|AK120263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047B18, full
            insert sequence
          Length = 2261

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 286  cacatttcttccttttctgg 305
            ||||||||||||||||||||
Sbjct: 2141 cacatttcttccttttctgg 2160
to top
>emb|AL670941.11| Mouse DNA sequence from clone RP23-291M22 on chromosome 4, complete
             sequence
          Length = 193162

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    caagtatgtgatgggaagca 52
             ||||||||||||||||||||
Sbjct: 89313 caagtatgtgatgggaagca 89332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,859,127
Number of Sequences: 3902068
Number of extensions: 2859127
Number of successful extensions: 54853
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54736
Number of HSP's gapped (non-prelim): 117
length of query: 374
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 352
effective length of database: 17,147,199,772
effective search space: 6035814319744
effective search space used: 6035814319744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top