Clone Name | rbart57e09 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1) | 34 | 0.097 | 2 | CR9CA_BACTO (Q45733) Pesticidal crystal protein cry9Ca (Insectic... | 28 | 5.3 | 3 | Y2235_STRCO (Q9Z4V7) Hypothetical protein SCO2235 (ORFU1E) | 28 | 5.3 | 4 | ACT_CRYNV (P48465) Actin | 28 | 6.9 | 5 | ACTN_STYCL (P53475) Actin, muscle | 27 | 9.1 | 6 | ACTM_STYCL (P26198) Actin, muscle | 27 | 9.1 |
---|
>CP2S1_MOUSE (Q9DBX6) Cytochrome P450 2S1 (EC 1.14.14.1) (CYPIIS1)| Length = 501 Score = 33.9 bits (76), Expect = 0.097 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = +2 Query: 200 GISQAWQQANTLSNLILLQLETPFTTVANHIGTAIFFLVIMTPG*SVKTHQRLYQRRTPQ 379 GIS W QA + + +L L P T + +H+GT F + V+ HQ +Q P Sbjct: 212 GISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQ-----QVQKHQGRFQTSGPA 266 Query: 380 TD 385 D Sbjct: 267 RD 268
>CR9CA_BACTO (Q45733) Pesticidal crystal protein cry9Ca (Insecticidal| delta-endotoxin CryIXC(a)) (Crystaline entomocidal protoxin) (130 kDa crystal protein) Length = 1157 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 241 LNIITTRDPFHHCCKSYWHGHLL-LGYNDSRVICEDSSEIVSTKNTTNRP 387 L I + R P YW GH L Y + + EDS +++T T P Sbjct: 353 LTISSNRFPVSSNFMDYWSGHTLRRSYLNDSAVQEDSYGLITTTRATINP 402
>Y2235_STRCO (Q9Z4V7) Hypothetical protein SCO2235 (ORFU1E)| Length = 87 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%) Frame = +3 Query: 3 NKIDSRFHVTSTRTNAVIM---DFTAWSCT 83 N+ + H+TS + NAV+M DFTAW+ T Sbjct: 20 NEDHAPVHITSRKGNAVLMSEEDFTAWTET 49
>ACT_CRYNV (P48465) Actin| Length = 375 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 211 GLATSKYPVKLNIITTRDPFHHCCKSYWHGHLLLGYNDSRVICEDSSEIVS 363 G+ T KYP++ I+T D + WH YN+ RV ED +++ Sbjct: 63 GILTLKYPIEHGIVTNWDDM----EKIWHHTF---YNELRVAPEDDPVLLT 106
>ACTN_STYCL (P53475) Actin, muscle| Length = 378 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 211 GLATSKYPVKLNIITTRDPFHHCCKSYWHGHLLLGYNDSRVICEDSSEIVS 363 G+ T KYP++ IIT D + WH + YN+ RV E+ +++ Sbjct: 66 GILTLKYPIEHGIITNWDDM----EKIWHHTM---YNELRVAPEEHPTLLT 109
>ACTM_STYCL (P26198) Actin, muscle| Length = 378 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 211 GLATSKYPVKLNIITTRDPFHHCCKSYWHGHLLLGYNDSRVICEDSSEIVS 363 G+ T KYP++ IIT D + WH + YN+ RV E+ +++ Sbjct: 66 GILTLKYPIEHGIITNWDDM----EKIWHHTM---YNELRVAPEEHPTLLT 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,054,741 Number of Sequences: 219361 Number of extensions: 1023976 Number of successful extensions: 2961 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2890 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2961 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)