ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart57e02 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 102 bits (253), Expect = 5e-22 Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 2/80 (2%) Frame = -2 Query: 422 FYDDADCAAN--WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNLYYGVIQVVQKAA 249 + D C N W+ WDKWTAAYP+ + Y+GL A ++ +VHPKN+YYGV V QK Sbjct: 219 YESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKKD 278 Query: 248 NYGGVMVWERYEDKRTNYSS 189 NYGG+M+W+RY DK+TNYSS Sbjct: 279 NYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 87.0 bits (214), Expect = 2e-17 Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 8/92 (8%) Frame = -2 Query: 422 FYDDADCAANW------QRQWDKWTAAYPSAQIYLGLPASEQ--KVGYVHPKNLYYGVIQ 267 FYDDA C+ N QW+KWTA YP + +YLGL A+ K V K LYY ++ Sbjct: 213 FYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLP 272 Query: 266 VVQKAANYGGVMVWERYEDKRTNYSSYAIQWA 171 VQKA NYGG+M+W+R+ DK+T Y WA Sbjct: 273 NVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 75.5 bits (184), Expect = 5e-14 Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Frame = -2 Query: 419 YDDADCAANWQRQWDKWTAAYPSAQIYLGLPAS-EQKVGYVHPKNLYYGVIQVVQKAANY 243 + D C + + W+KW AA+P +++Y+GL AS EQ ++ K+LYY ++Q V+ NY Sbjct: 211 FGDEQCTMSPRYSWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNY 270 Query: 242 GGVMVWERYEDKRTNYS 192 GG+ +++RY DK+ NY+ Sbjct: 271 GGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 60.5 bits (145), Expect = 2e-09 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Frame = -2 Query: 422 FYDDADCAA------NWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQ 267 FY++ C N W++WT + + +I+LGLPA+ + G YV P L ++ Sbjct: 208 FYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILP 267 Query: 266 VVQKAANYGGVMVWERYEDKRTNYSS 189 ++K+ YGGVM+W ++ D + YSS Sbjct: 268 EIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Frame = -2 Query: 422 FYDDADCA------ANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQ 267 FY++ C+ N W+KWT + + + +LGLPA+ + G Y+ P L ++ Sbjct: 211 FYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILP 270 Query: 266 VVQKAANYGGVMVWERYEDKRTNYSS 189 ++K+ YGGVM+W ++ D + YSS Sbjct: 271 TLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 59.3 bits (142), Expect = 4e-09 Identities = 29/85 (34%), Positives = 54/85 (63%), Gaps = 7/85 (8%) Frame = -2 Query: 422 FYDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQV 264 FY++ +C + N++R+W++WT+ P+ ++Y+GLPA++ G Y+ + L V+ Sbjct: 205 FYNNPECEFMSNSENFKRRWNQWTSI-PAKKLYIGLPAAKTAAGNGYIPKQVLMSQVLPF 263 Query: 263 VQKAANYGGVMVWERYEDKRTNYSS 189 ++ ++ YGGVM+W R D + YSS Sbjct: 264 LKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 57.0 bits (136), Expect = 2e-08 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 8/86 (9%) Frame = -2 Query: 422 FYDDADC------AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQ 267 FY++ C N W++WT++ S ++GLPAS G ++ L ++ Sbjct: 210 FYNNPPCQYSSGNTNNLLNSWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILP 269 Query: 266 VVQKAANYGGVMVWERYEDKRTNYSS 189 V++++ YGGVM+W +Y D ++ YSS Sbjct: 270 VIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 53.5 bits (127), Expect = 2e-07 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%) Frame = -2 Query: 410 ADCAANWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVIQVVQKAANYG 240 AD A N W++WTA +P++++Y+GLPA+ + G++ L V+ ++ ++NYG Sbjct: 212 ADNADNLLSSWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYG 270 Query: 239 GVMVWERYED 210 GVM+W + D Sbjct: 271 GVMLWSKAFD 280
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 52.0 bits (123), Expect = 6e-07 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 9/87 (10%) Frame = -2 Query: 422 FYDDADCAA------NWQRQWDKWTAAYPSAQIYLGLPASEQKV---GYVHPKNLYYGVI 270 FY++ C N W++WT++ + Q++LG+PAS+ G + L V+ Sbjct: 202 FYNNPQCQYSNGNINNLVNAWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVL 260 Query: 269 QVVQKAANYGGVMVWERYEDKRTNYSS 189 ++ + YGGVM+W+R+ D ++ YS+ Sbjct: 261 PAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%) Frame = -2 Query: 380 WDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWERYEDK 207 W++WT++ + Q++LG+PAS G ++ L V+ ++ ++ YGGVM+W+R+ D Sbjct: 228 WNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDG 286 Query: 206 RTNYSSYAI 180 ++ YS I Sbjct: 287 QSGYSGAII 295
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 48.5 bits (114), Expect = 6e-06 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%) Frame = -2 Query: 422 FYDDADC-----AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQV 264 FY++ C A N W++WT + QI+LGLPAS G ++ L V+ Sbjct: 206 FYNNPPCQYDTSADNLLSSWNQWTTVQAN-QIFLGLPASTDAAGSGFIPADALTSQVLPT 264 Query: 263 VQKAANYGGVMVWERYEDKRTNYSS 189 ++ +A YGGVM+W + D + YSS Sbjct: 265 IKGSAKYGGVMLWSKAYD--SGYSS 287
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 46.2 bits (108), Expect = 3e-05 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 8/86 (9%) Frame = -2 Query: 422 FYDDADC------AANWQRQWDKWTAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQ 267 FY++ C A N + W++W A + +I+LGLPA++ G ++ L V+ Sbjct: 203 FYNNPPCQYSGGSADNLKNYWNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLP 261 Query: 266 VVQKAANYGGVMVWERYEDKRTNYSS 189 ++ + YGGVM+W ++ D YSS Sbjct: 262 LINGSPKYGGVMLWSKFYD--NGYSS 285
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 45.4 bits (106), Expect = 5e-05 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%) Frame = -2 Query: 422 FYDDADC---AANWQR---QWDKWT-AAYP-SAQIYLGLPASEQKV---GYVHPKNLYYG 276 FY+D C N QR W WT + YP ++L LPAS+ GY+ P L Sbjct: 213 FYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQ 272 Query: 275 VIQVVQKA-ANYGGVMVWERYEDKRTNYSSYAIQW 174 V+ + Y G+ +W R DK T YS+ I++ Sbjct: 273 VLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>CHIT_YEAST (P29029) Endochitinase precursor (EC 3.2.1.14) (Soluble cell wall| protein 2) Length = 562 Score = 37.7 bits (86), Expect = 0.011 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 8/75 (10%) Frame = -2 Query: 422 FYDDADCAANWQRQWDKW------TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQ 267 FY++ C+ + Q WD W + + +++LGLP S G Y+ +L I Sbjct: 213 FYNNY-CSVSGQFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIA 271 Query: 266 VVQKAANYGGVMVWE 222 + ++++GG+ +W+ Sbjct: 272 DIASSSSFGGIALWD 286
>CHI1_CANAL (P46876) Chitinase 1 precursor (EC 3.2.1.14)| Length = 462 Score = 37.0 bits (84), Expect = 0.019 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%) Frame = -2 Query: 422 FYDDADCAANWQRQWDKWT--AAYPSAQIYLGLPASEQKV--GYVHPKNLYYGVIQVVQK 255 FY++ C+ N Q W+ W+ A S ++YLGLP S G+V + V+ ++ Sbjct: 203 FYNNY-CSLNQQFNWNSWSNYARGKSIKLYLGLPGSSSSAGSGFVGLSTV-QRVVASIKG 260 Query: 254 AANYGGVMVWE 222 +++GG+ +W+ Sbjct: 261 DSSFGGISIWD 271
>CHI2_CANAL (P40953) Chitinase 2 precursor (EC 3.2.1.14)| Length = 583 Score = 35.4 bits (80), Expect = 0.055 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 5/72 (6%) Frame = -2 Query: 422 FYDDADCAANWQRQWDKWTAAYPSA-----QIYLGLPASEQKVGYVHPKNLYYGVIQVVQ 258 FY++ C+ N Q +D W+ SA ++++G+PA+ GYV L I+ ++ Sbjct: 210 FYNNY-CSINGQFNYDTWSKFADSAPNKNIKLFVGVPATSNIAGYVDTSKL-SSAIEEIK 267 Query: 257 KAANYGGVMVWE 222 +++ GV +W+ Sbjct: 268 CDSHFAGVSLWD 279
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 32.3 bits (72), Expect = 0.46 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 380 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 WD W T+ + +I +P S G YV L V + K ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVWD 293
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)| Length = 860 Score = 32.3 bits (72), Expect = 0.46 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 20/87 (22%) Frame = -2 Query: 422 FYDDADCAANWQRQW-----------DKWT-----AAYPSAQIYLGLPASEQ---KVGYV 300 FY++ C+A ++W D W + P A++++GLPAS+ K Y+ Sbjct: 232 FYNNPSCSA---KRWVTNPKSVTYTVDDWVKYIRKSGNPLAKLFIGLPASKSAAAKEDYL 288 Query: 299 HPKNLYYGVIQVVQK-AANYGGVMVWE 222 P V + K + +GG+MVWE Sbjct: 289 TPGEATKIVSTYMAKYPSTFGGMMVWE 315
>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)| Length = 540 Score = 30.8 bits (68), Expect = 1.4 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%) Frame = -2 Query: 380 WDKW---TAAYPSAQIYLGLPASEQKVG--YVHPKNLYYGVIQVVQKAANYGGVMVWE 222 WD W T+ + +I +P S G YV L V + + ++YGGV VW+ Sbjct: 236 WDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYVPMSTLQTIVPSLASEYSSYGGVSVWD 293
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.0 bits (66), Expect = 2.3 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = -1 Query: 393 LAEAVGQVDGGVSVGADLPRAAGVRAEGRL---RSSKEPLLRRHTGGAEGGQLWRGHGLG 223 L +A + GG + G + R A R+ RSS P RR GGA GG RG G Sbjct: 997 LCDAGTAISGGKAEG-EKGRRRSSPARSRIKQGRSSSFPGRRRPRGGAHGG---RGRGRA 1052 Query: 222 TLRGQADKLQQL 187 L+ A ++ L Sbjct: 1053 RLKSTASSIETL 1064
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 2.3 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like proteinase (EC 3.4 Length = 6758 Score = 29.3 bits (64), Expect = 3.9 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = -3 Query: 73 KYCQCGVVCFIYNNKTRDLC 14 K+CQCG V YN+ + D C Sbjct: 5797 KHCQCGTVATCYNSVSNDYC 5816
>Y590_METJA (Q58010) Hypothetical protein MJ0590| Length = 704 Score = 28.9 bits (63), Expect = 5.1 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -2 Query: 392 WQRQWDKWTAAYPSAQIYLGLPASEQKVGYVHPKNL 285 W R ++ +YP + +G +E KVGY KNL Sbjct: 2 WGRDYELKYISYPKSVAIIGASKTEGKVGYAIMKNL 37
>VGLE_VZVD (P09259) Glycoprotein E precursor (Glycoprotein GI)| Length = 623 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -2 Query: 296 PKNLYYGVIQVVQKAANYGGVMVWE-RYEDKRTNYSSYAIQW 174 P + GV++V++ Y GV +W R D + Y+++ + W Sbjct: 278 PPEIEPGVLKVLRTEKQYLGVYIWNMRGSDGTSTYATFLVTW 319
>FLGE_CAUCR (P35806) Flagellar hook protein flgE| Length = 591 Score = 28.9 bits (63), Expect = 5.1 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 311 PSALTPAARGRSAPTDTPPSTCPTASASW 397 P+A+T + G APT TPP+ P +W Sbjct: 404 PTAITIKSSGYIAPTVTPPAVQPPTPPTW 432
>FIMC_BORPE (P33410) Outer membrane usher protein fimC precursor| Length = 873 Score = 28.5 bits (62), Expect = 6.7 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -3 Query: 298 IQRTSTTASYRWCRRRPTMAGSWSGNVTRTSGQIT 194 +QR T+A Y + GSWSG SGQ+T Sbjct: 620 VQRAGTSAQY-------ALNGSWSGTYGEVSGQLT 647
>WDR50_DROME (Q9V7P1) Hypothetical WD-repeat protein l(2)k07824| Length = 506 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = -2 Query: 365 AAYPSAQIYLGLPASEQKVGYV 300 A +PSA +Y PA +KVG+V Sbjct: 453 AHFPSATVYSNFPAQNEKVGFV 474
>SYA_STAES (Q8CSA7) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 381 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 220 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>SYA_STAEQ (Q5HNT2) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 876 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -1 Query: 381 VGQVDGGVSVGADLPRAAGVRAE-GRLRSSKEPLLRRHTGGAEGGQLWRGHGLGT 220 VGQVDG VSV A +P++ + + G L + P++ GG GG+ G GT Sbjct: 807 VGQVDGKVSVIATVPKSLTNQVKAGDLIKNMTPII----GGKGGGRPDMAQGGGT 857
>RGL2_MOUSE (Q61193) Ral guanine nucleotide dissociation stimulator-like 2| (RalGDS-like factor) (RAS-associated protein RAB2L) Length = 778 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 293 LDERNRPSALTPAARGRSAPTDTPPS 370 L +R RPSA TP + + + TPPS Sbjct: 731 LRQRRRPSAATPGSHSGPSASGTPPS 756 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,037,602 Number of Sequences: 219361 Number of extensions: 1035618 Number of successful extensions: 4142 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3842 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4127 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
