ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009306.1| Triticum aestivum clone wlm1.pk0017.b7:fis, full ... 763 0.0
2dbj|AK104090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
3dbj|AK061318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 7e-80
4gb|AF461732.1| Zea mays uncoupling protein mRNA, complete cds; n... 274 2e-70
5gb|AY105357.1| Zea mays PCO091508 mRNA sequence 274 2e-70
6gb|BT016716.1| Zea mays clone Contig549 mRNA sequence 266 6e-68
7gb|AY644461.1| Saccharum officinarum mitochondrial uncoupling pr... 242 9e-61
8gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 153 6e-34
11dbj|AB049998.1| Oryza sativa (japonica cultivar-group) OsUCP2 ge... 153 6e-34
12dbj|AB097119.1| Oryza sativa (japonica cultivar-group) OsUCP2 ge... 133 6e-28
13gb|AF472619.1| Lycopersicon esculentum putative uncoupling prote... 86 1e-13
14dbj|AB189672.1| Dracunculus vulgaris DvUCPa mRNA for uncoupling ... 80 7e-12
15emb|Y11220.1|STUCPMRNA Solanum tuberosum mRNA for mitochondrial ... 80 7e-12
16gb|AY644460.1| Saccharum officinarum mitochondrial uncoupling pr... 74 5e-10
17dbj|AB088762.1| Helicodiceros muscivorus HmUCPa mRNA for mitocho... 72 2e-09
18dbj|AK103874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
19dbj|AK102326.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
20ref|NM_115271.3| Arabidopsis thaliana ATPUMP1 (UNCOUPLING PROTEI... 58 3e-05
21gb|AY091185.1| Arabidopsis thaliana putative uncoupling protein ... 58 3e-05
22gb|AY056272.1| Arabidopsis thaliana putative uncoupling protein ... 58 3e-05
23dbj|AK221112.1| Arabidopsis thaliana mRNA for uncoupling protein... 58 3e-05
24emb|BX822713.1|CNS0A60R Arabidopsis thaliana Full-length cDNA Co... 58 3e-05
25gb|AF146226.1|AF146226 Arabidopsis thaliana putative uncoupling ... 58 3e-05
26dbj|AB024733.1| Symplocarpus foetidus mRNA for SfUCPa, complete cds 54 4e-04
27emb|AJ001264.1|ATMTUNCOU Arabidopsis thaliana mRNA for mitochond... 52 0.002
28emb|AJ223983.1|ATPUMP Arabidopsis thaliana mRNA for plant uncoup... 52 0.002
29dbj|AB024734.1| Symplocarpus foetidus mRNA for SfUCPb, complete cds 50 0.007
30dbj|AB042429.1| Triticum aestivum WhUCP1b mRNA for uncoupling pr... 48 0.026
31dbj|AB042428.1| Triticum aestivum WhUCP1a mRNA for uncoupling pr... 48 0.026
32ref|NM_125287.3| Arabidopsis thaliana ATUCP2 (UNCOUPLING PROTEIN... 46 0.10
33gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete s... 46 0.10
34gb|AF452027.1|AF452027 Glycine max uncoupling protein 1a gene, p... 46 0.10
35emb|BX830962.1|CNS0A0RZ Arabidopsis thaliana Full-length cDNA Co... 46 0.10
36emb|BX830653.1|CNS0A0NL Arabidopsis thaliana Full-length cDNA Co... 46 0.10
37gb|AY088200.1| Arabidopsis thaliana clone 42926 mRNA, complete s... 46 0.10
38dbj|AB021706.1| Arabidopsis thaliana mRNA for uncoupling protein... 46 0.10
39gb|AY109789.1| Zea mays CL29469_-1 mRNA sequence 46 0.10
40gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.41
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
42emb|BX822677.1|CNS0A4PL Arabidopsis thaliana Full-length cDNA Co... 44 0.41
43dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
44dbj|AB049997.1| Oryza sativa (japonica cultivar-group) OsUCP1 ge... 44 0.41
45gb|DQ139858.1| Coreius heterodon microsatellite CH14 sequence 42 1.6
46gb|AE016828.2| Coxiella burnetii RSA 493, complete genome 42 1.6
47emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, B... 42 1.6
48emb|BX829442.1|CNS0A1J8 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
49gb|AF387640.1| Coxiella burnetii dTDP-glucose-4,6 dehydratase, d... 42 1.6
50emb|Y18291.1|ATH18291 Arabidopsis thaliana ucp gene, exons 1-9 42 1.6
51emb|AJ002586.1|STAJ2586 Solanum tuberosum gene for mitochondrial... 42 1.6
52gb|AF016656.2| Caenorhabditis elegans cosmid C35A11, complete se... 40 6.4
53ref|XM_369753.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.4
54gb|AY601381.1| Apis mellifera AFLP marker a22.330e genomic sequence 40 6.4
55emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chro... 40 6.4
56gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosom... 40 6.4
57gb|AC024135.2| Caenorhabditis elegans cosmid C25A6, complete seq... 40 6.4
58gb|AE014183.1| Mus musculus piebald deletion region section 11 o... 40 6.4
59gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswel... 40 6.4
60gb|AY119525.1| Drosophila melanogaster GH15728 full insert cDNA 40 6.4
61gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswel... 40 6.4
62emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in ... 40 6.4
63ref|NM_139371.1| Drosophila melanogaster CG13917-RA (CG13917), mRNA 40 6.4
64gb|AE010180.1| Pyrococcus furiosus DSM 3638, section 55 of 173 o... 40 6.4
65gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9... 40 6.4
66ref|XM_215757.3| PREDICTED: Rattus norvegicus frizzled-related p... 40 6.4
67dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 40 6.4
68gb|AC006609.1|AC006609 Caenorhabditis elegans clone C25A6, compl... 40 6.4
69gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 ... 40 6.4
70emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in... 40 6.4
71gb|AC122542.3| Mus musculus BAC clone RP24-572J16 from 9, comple... 40 6.4
72dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.4
73emb|AL808117.6| Mouse DNA sequence from clone RP23-240N3 on chro... 40 6.4 
>gb|BT009306.1| Triticum aestivum clone wlm1.pk0017.b7:fis, full insert mRNA sequence
          Length = 1376

 Score =  763 bits (385), Expect = 0.0
 Identities = 456/476 (95%), Gaps = 3/476 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ccaacacaaatttagcaacactttgagatctccgaactacctcagcatttgtttaaggtc 60
            |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1182 ccaacacaaatttaacaacactttgagatctccgaactacttcagcatttgtttaaggtc 1123

                                                                        
Query: 61   ctgtcaagagcgacaaaaatttattacagtttctcacggttgaggtctcaaatttgtcct 120
            ||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 1122 ctgtcaagaccgacaaaattttattatagtttctcacagttgaggtctcaaatttgtcct 1063

                                                                        
Query: 121  ttgtacctcaa-ctcccaagggttaacgccttatgtaggagaaaacaaatgtgcacattg 179
            ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 1062 ttgtacctcaaactcccaagggttaacgtcttatgtaggagaaaacaaatgcgcacattg 1003

                                                                        
Query: 180  ttgttgtataccaccctctacaaaacc-atatcatctcatcgctaatttgcaggctttct 238
            ||||||||||||||||||||||||||| |||||||||| ||  |||||||||||||||||
Sbjct: 1002 ttgttgtataccaccctctacaaaacccatatcatctcgtctttaatttgcaggctttct 943

                                                                        
Query: 239  cacaaaggcctt-ctgaacctgctccagtgtcaagaacataatcacgttccatgatccca 297
            |||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 942  cacaaaggcctttctgaacctgctccagtgtcaagaacatgatcacattccatgatccca 883

                                                                        
Query: 298  gtctagcaaagtttggaaggaagcctttgtaaaatgccagaggtccatcattctttaggg 357
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 882  gtctagcaaagtttggaagaaagcctttgtaaaatgccagaggtccatcattctttaggg 823

                                                                        
Query: 358  tcttcacaaaacaatcaatagtgttcttgtaggcagagtcacccatcattcttgacttaa 417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822  tcttcacaaaacaatcaatagtgttcttgtaggcagagtcacccatcattcttgacttaa 763

                                                                    
Query: 418  ccacatcgactggagaaccaacacagacagcanagaagccagcgcccaaaccagac 473
            |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 762  ccacatcgacgggagaaccaacacaaacagcaaagaagccagcgcccaaaccagac 707
to top
>dbj|AK104090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B06, full
           insert sequence
          Length = 1179

 Score =  305 bits (154), Expect = 7e-80
 Identities = 207/225 (92%)
 Strand = Plus / Minus

                                                                       
Query: 248 cttctgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaa 307
           |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 946 cttctggacctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaa 887

                                                                       
Query: 308 gtttggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaa 367
           |||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 886 gtttgggaggaagcctttgtaaaatgccagaggtccatcattcttcagcgtcttcacgaa 827

                                                                       
Query: 368 acaatcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgac 427
           ||||||||||||  |  ||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 826 acaatcaatagtacttgtgtaggccgagtcacccatcattcttgacttgaccacatccac 767

                                                        
Query: 428 tggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
           |||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 766 tggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 722
to top
>dbj|AK061318.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D12, full
           insert sequence
          Length = 1263

 Score =  305 bits (154), Expect = 7e-80
 Identities = 207/225 (92%)
 Strand = Plus / Minus

                                                                       
Query: 248 cttctgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaa 307
           |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 948 cttctggacctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaa 889

                                                                       
Query: 308 gtttggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaa 367
           |||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 888 gtttgggaggaagcctttgtaaaatgccagaggtccatcattcttcagcgtcttcacgaa 829

                                                                       
Query: 368 acaatcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgac 427
           ||||||||||||  |  ||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct: 828 acaatcaatagtacttgtgtaggccgagtcacccatcattcttgacttgaccacatccac 769

                                                        
Query: 428 tggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
           |||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 768 tggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 724
to top
>gb|AF461732.1| Zea mays uncoupling protein mRNA, complete cds; nuclear gene for
           mitochondrial product
          Length = 1243

 Score =  274 bits (138), Expect = 2e-70
 Identities = 191/209 (91%)
 Strand = Plus / Minus

                                                                       
Query: 252 tgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagttt 311
           ||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 960 tgaacctgctccaatgtcaagaacataatcacattccaagatcccagtcttgcaaagttt 901

                                                                       
Query: 312 ggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaa 371
           || |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 900 ggcaggaagcctttgtaaaatgccaaagggccatcattctttagcgtcttcacaaaacaa 841

                                                                       
Query: 372 tcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactgga 431
           || | |||| | |||||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 840 tcgagagtgcttttgtaggctgagtcacccatcattctcgacttaaccacatcaactggg 781

                                        
Query: 432 gaaccaacacagacagcanagaagccagc 460
           ||||||||||| |||||| ||||||||||
Sbjct: 780 gaaccaacacaaacagcaaagaagccagc 752
to top
>gb|AY105357.1| Zea mays PCO091508 mRNA sequence
          Length = 1422

 Score =  274 bits (138), Expect = 2e-70
 Identities = 191/209 (91%)
 Strand = Plus / Minus

                                                                       
Query: 252 tgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagttt 311
           ||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 962 tgaacctgctccaatgtcaagaacataatcacattccaagatcccagtcttgcaaagttt 903

                                                                       
Query: 312 ggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaa 371
           || |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||
Sbjct: 902 ggcaggaagcctttgtaaaatgccaaagggccatcattctttagcgtcttcacaaaacaa 843

                                                                       
Query: 372 tcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactgga 431
           || | |||| | |||||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 842 tcgagagtgcttttgtaggctgagtcacccatcattctcgacttaaccacatcaactggg 783

                                        
Query: 432 gaaccaacacagacagcanagaagccagc 460
           ||||||||||| |||||| ||||||||||
Sbjct: 782 gaaccaacacaaacagcaaagaagccagc 754
to top
>gb|BT016716.1| Zea mays clone Contig549 mRNA sequence
          Length = 1326

 Score =  266 bits (134), Expect = 6e-68
 Identities = 190/209 (90%)
 Strand = Plus / Minus

                                                                       
Query: 252 tgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagttt 311
           ||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 985 tgaacctgctccaatgtcaagaacataatcacattccaagatcccagtcttgcaaagttt 926

                                                                       
Query: 312 ggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaa 371
           || |||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||
Sbjct: 925 ggcaggaagcctttgtaaaatgccaaagggccatcgttctttagcgtcttcacaaaacaa 866

                                                                       
Query: 372 tcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactgga 431
           || | |||| | |||||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 865 tcgagagtgcttttgtaggctgagtcacccatcattctcgacttaaccacatcaactggg 806

                                        
Query: 432 gaaccaacacagacagcanagaagccagc 460
           ||||||||||| |||||| ||||||||||
Sbjct: 805 gaaccaacacaaacagcaaagaagccagc 777
to top
>gb|AY644461.1| Saccharum officinarum mitochondrial uncoupling protein 2 mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1468

 Score =  242 bits (122), Expect = 9e-61
 Identities = 187/209 (89%)
 Strand = Plus / Minus

                                                                        
Query: 252  tgaacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagttt 311
            ||||||||||| | |||||||||||||||||| ||||| ||||| ||||| |||||||||
Sbjct: 1036 tgaacctgctctaatgtcaagaacataatcacattccaagatccaagtcttgcaaagttt 977

                                                                        
Query: 312  ggaaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaa 371
            || |||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||
Sbjct: 976  ggcaggaagcctttgtaaaatgccaaagggccatcattcttaagtgtcttcacaaaacaa 917

                                                                        
Query: 372  tcaatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactgga 431
            || | |||| | |||||||| ||||||||||||||||| |||||||||||||| ||||| 
Sbjct: 916  tcgagagtgcttttgtaggctgagtcacccatcattctcgacttaaccacatcaactggg 857

                                         
Query: 432  gaaccaacacagacagcanagaagccagc 460
            ||||| ||||| |||||| ||||||||||
Sbjct: 856  gaaccgacacaaacagcaaagaagccagc 828
to top
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  153 bits (77), Expect = 6e-34
 Identities = 86/89 (96%)
 Strand = Plus / Minus

                                                                         
Query: 255   acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
             ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 60497 acctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaagtttggg 60438

                                          
Query: 315   aggaagcctttgtaaaatgccagaggtcc 343
             |||||||||||||||||||||||||||||
Sbjct: 60437 aggaagcctttgtaaaatgccagaggtcc 60409



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                         
Query: 343   catcattctttagggtcttcacaaaacaatcaatagtgttcttgtaggcagagtcaccca 402
             |||||||||| || |||||||| ||||||||||||||  |  ||||||| ||||||||||
Sbjct: 59190 catcattcttcagcgtcttcacgaaacaatcaatagtacttgtgtaggccgagtcaccca 59131

                          
Query: 403   tcattcttgactt 415
             |||||||||||||
Sbjct: 59130 tcattcttgactt 59118



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 417   accacatcgactggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
             |||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 58482 accacatccactggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 58427
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  153 bits (77), Expect = 6e-34
 Identities = 86/89 (96%)
 Strand = Plus / Minus

                                                                            
Query: 255      acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
                ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 28333759 acctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaagtttggg 28333700

                                             
Query: 315      aggaagcctttgtaaaatgccagaggtcc 343
                |||||||||||||||||||||||||||||
Sbjct: 28333699 aggaagcctttgtaaaatgccagaggtcc 28333671



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 343      catcattctttagggtcttcacaaaacaatcaatagtgttcttgtaggcagagtcaccca 402
                |||||||||| || |||||||| ||||||||||||||  |  ||||||| ||||||||||
Sbjct: 28332452 catcattcttcagcgtcttcacgaaacaatcaatagtacttgtgtaggccgagtcaccca 28332393

                             
Query: 403      tcattcttgactt 415
                |||||||||||||
Sbjct: 28332392 tcattcttgactt 28332380



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 417      accacatcgactggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
                |||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 28331744 accacatccactggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 28331689



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 18      acactttgagatctccgaacta 39
               ||||||||||||||||||||||
Sbjct: 8438750 acactttgagatctccgaacta 8438729
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  153 bits (77), Expect = 6e-34
 Identities = 86/89 (96%)
 Strand = Plus / Minus

                                                                            
Query: 255      acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
                ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 28316208 acctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaagtttggg 28316149

                                             
Query: 315      aggaagcctttgtaaaatgccagaggtcc 343
                |||||||||||||||||||||||||||||
Sbjct: 28316148 aggaagcctttgtaaaatgccagaggtcc 28316120



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                            
Query: 343      catcattctttagggtcttcacaaaacaatcaatagtgttcttgtaggcagagtcaccca 402
                |||||||||| || |||||||| ||||||||||||||  |  ||||||| ||||||||||
Sbjct: 28314901 catcattcttcagcgtcttcacgaaacaatcaatagtacttgtgtaggccgagtcaccca 28314842

                             
Query: 403      tcattcttgactt 415
                |||||||||||||
Sbjct: 28314841 tcattcttgactt 28314829



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 417      accacatcgactggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
                |||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 28314193 accacatccactggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 28314138



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 18      acactttgagatctccgaacta 39
               ||||||||||||||||||||||
Sbjct: 8509513 acactttgagatctccgaacta 8509492
to top
>dbj|AB049998.1| Oryza sativa (japonica cultivar-group) OsUCP2 gene for uncoupling
            protein, complete cds
          Length = 3939

 Score =  153 bits (77), Expect = 6e-34
 Identities = 86/89 (96%)
 Strand = Plus / Minus

                                                                        
Query: 255  acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
            ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| 
Sbjct: 3520 acctgctccagtgtcaagaacattatcacattccatgatcccagtctagcaaagtttggg 3461

                                         
Query: 315  aggaagcctttgtaaaatgccagaggtcc 343
            |||||||||||||||||||||||||||||
Sbjct: 3460 aggaagcctttgtaaaatgccagaggtcc 3432



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 65/73 (89%)
 Strand = Plus / Minus

                                                                        
Query: 343  catcattctttagggtcttcacaaaacaatcaatagtgttcttgtaggcagagtcaccca 402
            |||||||||| || |||||||| ||||||||||||||  |  ||||||| ||||||||||
Sbjct: 2216 catcattcttcagcgtcttcacgaaacaatcaatagtacttgtgtaggccgagtcaccca 2157

                         
Query: 403  tcattcttgactt 415
            |||||||||||||
Sbjct: 2156 tcattcttgactt 2144



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 417  accacatcgactggagaaccaacacagacagcanagaagccagcgcccaaaccaga 472
            |||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||
Sbjct: 1509 accacatccactggagaaccaacacagacagcgaagaagcccgcgcccagaccaga 1454
to top
>dbj|AB097119.1| Oryza sativa (japonica cultivar-group) OsUCP2 gene for uncoupling
           protein, exon 8, partial sequence
          Length = 810

 Score =  133 bits (67), Expect = 6e-28
 Identities = 76/79 (96%)
 Strand = Plus / Minus

                                                                       
Query: 265 gtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttggaaggaagcctt 324
           ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 810 gtgtcaagaacattatcacattccatgatcccagtctagcaaagtttgggaggaagcctt 751

                              
Query: 325 tgtaaaatgccagaggtcc 343
           |||||||||||||||||||
Sbjct: 750 tgtaaaatgccagaggtcc 732
to top
>gb|AF472619.1| Lycopersicon esculentum putative uncoupling protein mRNA, complete
            cds
          Length = 1429

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 318  aagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatcaata 377
            |||||||| || || |||| ||| ||||||||||| |  ||||| ||||||||||||| |
Sbjct: 1018 aagcctttatagaaagccaaaggcccatcattcttcaatgtcttgacaaaacaatcaaga 959

                                                           
Query: 378  gtgttcttgtaggcagagtcacccatcattcttgacttaaccacatc 424
            ||||| ||||| || || || ||||||||||||||||| ||||||||
Sbjct: 958  gtgtttttgtatgcggaatctcccatcattcttgactttaccacatc 912
to top
>dbj|AB189672.1| Dracunculus vulgaris DvUCPa mRNA for uncoupling protein a, complete
            cds
          Length = 1123

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 148/184 (80%)
 Strand = Plus / Minus

                                                                        
Query: 255  acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
            |||||||||| |||||||||||| || || |||||||| || || | | |||| ||||| 
Sbjct: 1057 acctgctccaatgtcaagaacattataacattccatgaccctagccgaccaaaatttggg 998

                                                                        
Query: 315  aggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatca 374
            | ||| || ||||| ||||| ||||| |||||||| || |  ||||| | ||||||||||
Sbjct: 997  atgaatcccttgtagaatgcaagaggaccatcatttttaaatgtcttgataaaacaatca 938

                                                                        
Query: 375  atagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggagaa 434
            |  ||| | |||||||  ||||| ||||||||||| || || |||||||| || || |||
Sbjct: 937  agtgtgcttttgtaggttgagtctcccatcattctagattttaccacatcaacaggggaa 878

                
Query: 435  ccaa 438
            ||||
Sbjct: 877  ccaa 874
to top
>emb|Y11220.1|STUCPMRNA Solanum tuberosum mRNA for mitochondrial uncoupling protein
          Length = 1434

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 97/116 (83%)
 Strand = Plus / Minus

                                                                        
Query: 318  aagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatcaata 377
            ||||||||||| || |||| ||||||||||||||| |  || || ||||||||||||| |
Sbjct: 1010 aagcctttgtagaaagccaaaggtccatcattcttcaatgttttgacaaaacaatcaaga 951

                                                                    
Query: 378  gtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggaga 433
            || || ||||| || || || ||||||||||| ||||| |||||||| || |||||
Sbjct: 950  gtatttttgtatgcggaatctcccatcattctcgactttaccacatcaacaggaga 895
to top
>gb|AY644460.1| Saccharum officinarum mitochondrial uncoupling protein 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1240

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 148/185 (80%)
 Strand = Plus / Minus

                                                                       
Query: 254 aacctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgg 313
           |||||| ||||| || |||||||| ||||| |||||||| || |  | |  |||||||| 
Sbjct: 946 aacctgttccagagttaagaacattatcacattccatgacccaatccgacaaaagtttgc 887

                                                                       
Query: 314 aaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatc 373
           || ||| || |||||||| ||   |||||| ||||||||||| |||||  ||||||||||
Sbjct: 886 aatgaaccccttgtaaaaagcaccaggtccgtcattctttagtgtcttggcaaaacaatc 827

                                                                       
Query: 374 aatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggaga 433
           || |||  |  |||| |  || ||||||||||||||||| || |||||||| ||||||||
Sbjct: 826 aagagtacttctgtacgttgaatcacccatcattcttgatttcaccacatccactggaga 767

                
Query: 434 accaa 438
            ||||
Sbjct: 766 gccaa 762
to top
>dbj|AB088762.1| Helicodiceros muscivorus HmUCPa mRNA for mitochondrial uncoupling
           protein, complete cds
          Length = 1209

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 147/184 (79%)
 Strand = Plus / Minus

                                                                       
Query: 255 acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
           |||||||||| |||||| ||||| || || |||||||| || || | | |||| ||||| 
Sbjct: 897 acctgctccaatgtcaaaaacattataacattccatgaccctagccgaccaaaatttggg 838

                                                                       
Query: 315 aggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatca 374
           | ||| || ||||| ||||| ||||| |||||||| || |  ||||| | ||||||||||
Sbjct: 837 atgaatcccttgtagaatgcaagaggaccatcatttttaaatgtcttgataaaacaatca 778

                                                                       
Query: 375 atagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggagaa 434
           |  ||| | |||||||  ||||| ||||||||||| || || |||||||| || || |||
Sbjct: 777 agtgtgcttttgtaggttgagtctcccatcattctagattttaccacatcaacaggggaa 718

               
Query: 435 ccaa 438
           ||||
Sbjct: 717 ccaa 714
to top
>dbj|AK103874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149M03, full
            insert sequence
          Length = 1451

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 149/185 (80%), Gaps = 2/185 (1%)
 Strand = Plus / Minus

                                                                        
Query: 255  acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaa-gtttgg 313
            |||||||||||||| || ||||| ||||| |||||||| |||| |   ||||| ||||| 
Sbjct: 1053 acctgctccagtgttaaaaacattatcacattccatga-cccaatgcggcaaaagtttgc 995

                                                                        
Query: 314  aaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatc 373
            || ||| ||||| ||||| ||  || |||||||||||||||  |||||  ||||||| ||
Sbjct: 994  aatgaaccctttataaaaagcaggaagtccatcattctttaatgtctttgcaaaacagtc 935

                                                                        
Query: 374  aatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggaga 433
             |  ||  ||||||| |  | |||||||||||||||||| || |||||||| ||||||||
Sbjct: 934  tagtgtactcttgtacgttgcgtcacccatcattcttgatttcaccacatccactggaga 875

                 
Query: 434  accaa 438
             ||||
Sbjct: 874  gccaa 870
to top
>dbj|AK102326.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090K13, full
           insert sequence
          Length = 1405

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 149/185 (80%), Gaps = 2/185 (1%)
 Strand = Plus / Minus

                                                                       
Query: 255 acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaa-gtttgg 313
           |||||||||||||| || ||||| ||||| |||||||| |||| |   ||||| ||||| 
Sbjct: 990 acctgctccagtgttaaaaacattatcacattccatga-cccaatgcggcaaaagtttgc 932

                                                                       
Query: 314 aaggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatc 373
           || ||| ||||| ||||| ||  || |||||||||||||||  |||||  ||||||| ||
Sbjct: 931 aatgaaccctttataaaaagcaggaagtccatcattctttaatgtctttgcaaaacagtc 872

                                                                       
Query: 374 aatagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggaga 433
            |  ||  ||||||| |  | |||||||||||||||||| || |||||||| ||||||||
Sbjct: 871 tagtgtactcttgtacgttgcgtcacccatcattcttgatttcaccacatccactggaga 812

                
Query: 434 accaa 438
            ||||
Sbjct: 811 gccaa 807
to top
>ref|NM_115271.3| Arabidopsis thaliana ATPUMP1 (UNCOUPLING PROTEIN PUMP2); binding /
           oxidative phosphorylation uncoupler AT3G54110 (ATPUMP1)
           mRNA, complete cds
          Length = 1324

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 929 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 874
to top
>gb|AY091185.1| Arabidopsis thaliana putative uncoupling protein (At3g54110) mRNA,
           complete cds
          Length = 952

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 731 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 676
to top
>gb|AY056272.1| Arabidopsis thaliana putative uncoupling protein ucp/PUMP
           (At3g54110) mRNA, complete cds
          Length = 1274

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 912 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 857
to top
>dbj|AK221112.1| Arabidopsis thaliana mRNA for uncoupling protein, complete cds,
           clone: RAFL22-89-G11
          Length = 768

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 366 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 311
to top
>emb|BX822713.1|CNS0A60R Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB5ZB01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1285

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 928 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 873
to top
>gb|AF146226.1|AF146226 Arabidopsis thaliana putative uncoupling protein PUMP2 (UCP2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 921

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaacacagacagcanagaa 454
           ||||||||||||||||||||||| ||||| ||||| || |  ||||||||| ||||
Sbjct: 731 cccatcattcttgacttaaccacgtcgacaggagagccgatgcagacagcaaagaa 676
to top
>dbj|AB024733.1| Symplocarpus foetidus mRNA for SfUCPa, complete cds
          Length = 1525

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 150/191 (78%)
 Strand = Plus / Minus

                                                                        
Query: 255  acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
            ||||||||||  ||||| ||||| ||||| ||||| ||||| |  | | |||||||||| 
Sbjct: 1157 acctgctccaaggtcaaaaacatgatcacattccacgatcctaaccgaccaaagtttggg 1098

                                                                        
Query: 315  aggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatca 374
            |  || || |||||||| || ||| | |||||||| || |  ||||| |  |||||||||
Sbjct: 1097 ataaaccccttgtaaaaagcaagaagcccatcatttttcaatgtcttgatgaaacaatca 1038

                                                                        
Query: 375  atagtgttcttgtaggcagagtcacccatcattcttgacttaaccacatcgactggagaa 434
            |  ||| | |||||||| || || ||||||||||| ||||| | |||||| || ||||||
Sbjct: 1037 aatgtgcttttgtaggctgaatctcccatcattctagacttcatcacatcaacaggagaa 978

                       
Query: 435  ccaacacagac 445
            || | ||||||
Sbjct: 977  ccgatacagac 967
to top
>emb|AJ001264.1|ATMTUNCOU Arabidopsis thaliana mRNA for mitochondrial uncoupling protein
          Length = 1240

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 399 cccatcattcttgacttaaccacatcgactggagaacc 436
           ||||||||||||||||||||||| || || ||||||||
Sbjct: 893 cccatcattcttgacttaaccacgtcaacaggagaacc 856
to top
>emb|AJ223983.1|ATPUMP Arabidopsis thaliana mRNA for plant uncoupling mitochondrial
           protein (PUMP)
          Length = 1225

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 399 cccatcattcttgacttaaccacatcgactggagaacc 436
           ||||||||||||||||||||||| || || ||||||||
Sbjct: 881 cccatcattcttgacttaaccacgtcaacaggagaacc 844
to top
>dbj|AB024734.1| Symplocarpus foetidus mRNA for SfUCPb, complete cds
          Length = 2991

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 127/161 (78%)
 Strand = Plus / Minus

                                                                        
Query: 255  acctgctccagtgtcaagaacataatcacgttccatgatcccagtctagcaaagtttgga 314
            ||||||||||  ||||| ||||| ||||| ||||| ||||| |  | | |||||||||| 
Sbjct: 1058 acctgctccaaggtcaaaaacatgatcacattccacgatcctaaccgaccaaagtttggg 999

                                                                        
Query: 315  aggaagcctttgtaaaatgccagaggtccatcattctttagggtcttcacaaaacaatca 374
            |  || || |||||||| || ||||| |||||||| || |  ||||| |  |||||||||
Sbjct: 998  ataaaccccttgtaaaaagcaagaggcccatcatttttcaacgtcttgatgaaacaatca 939

                                                     
Query: 375  atagtgttcttgtaggcagagtcacccatcattcttgactt 415
            |  ||| | |||||||| || || ||||||||||| |||||
Sbjct: 938  aatgtgcttttgtaggctgaatctcccatcattctagactt 898
to top
>dbj|AB042429.1| Triticum aestivum WhUCP1b mRNA for uncoupling protein, complete cds
          Length = 971

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaa 438
           |||||||||||||| || |||||||| |||||||| ||||
Sbjct: 764 cccatcattcttgatttcaccacatccactggagatccaa 725
to top
>dbj|AB042428.1| Triticum aestivum WhUCP1a mRNA for uncoupling protein, complete cds
          Length = 974

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 399 cccatcattcttgacttaaccacatcgactggagaaccaa 438
           |||||||||||||| || |||||||| |||||||| ||||
Sbjct: 767 cccatcattcttgatttcaccacatccactggagatccaa 728
to top
>ref|NM_125287.3| Arabidopsis thaliana ATUCP2 (UNCOUPLING PROTEIN 2); oxidative
           phosphorylation uncoupler AT5G58970 (ATUCP2) transcript
           variant AT5G58970.1 mRNA, complete cds
          Length = 1736

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaaccaacacagacagcana 451
           |||||| ||||||||||| || || |||||||| | ||||||||| |  ||||||||  |
Sbjct: 984 agagtctcccatcattctagatttcaccacatcaattggagaaccgatgcagacagcgaa 925

                 
Query: 452 gaagcc 457
           ||||||
Sbjct: 924 gaagcc 919
to top
>gb|AC152936.21| Medicago truncatula clone mth2-47n14, complete sequence
          Length = 130801

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 273   aacataatcacgttccatgatcccagtctagcaaagtttggaaggaagcctttgtaaaat 332
             ||||||||||||||||| ||||| || |   |||| ||||| ||||| ||||| ||||| 
Sbjct: 82629 aacataatcacgttccaagatcctagccgtccaaaatttgggaggaaccctttataaaac 82570

                        
Query: 333   gccagaggtcc 343
             |||| ||||||
Sbjct: 82569 gccaaaggtcc 82559
to top
>gb|AF452027.1|AF452027 Glycine max uncoupling protein 1a gene, partial cds; nuclear gene for
            mitochondrial product
          Length = 1888

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 365  aaaacaatcaatagtgttcttgtaggcagagtcacccatcattcttgacttaacc 419
            |||||||||||  |||||| ||||   ||| || |||||||||||||||||||||
Sbjct: 1445 aaaacaatcaagggtgttcctgtaactagaatctcccatcattcttgacttaacc 1391
to top
>emb|BX830962.1|CNS0A0RZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZD01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1277

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaaccaacacagacagcana 451
           |||||| ||||||||||| || || |||||||| | ||||||||| |  ||||||||  |
Sbjct: 921 agagtctcccatcattctagatttcaccacatcaattggagaaccgatgcagacagcgaa 862

                 
Query: 452 gaagcc 457
           ||||||
Sbjct: 861 gaagcc 856
to top
>emb|BX830653.1|CNS0A0NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS10ZC06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaaccaacacagacagcana 451
           |||||| ||||||||||| || || |||||||| | ||||||||| |  ||||||||  |
Sbjct: 978 agagtctcccatcattctagatttcaccacatcaattggagaaccgatgcagacagcgaa 919

                 
Query: 452 gaagcc 457
           ||||||
Sbjct: 918 gaagcc 913
to top
>gb|AY088200.1| Arabidopsis thaliana clone 42926 mRNA, complete sequence
          Length = 1227

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaaccaacacagacagcana 451
           |||||| ||||||||||| || || |||||||| | ||||||||| |  ||||||||  |
Sbjct: 915 agagtctcccatcattctagatttcaccacatcaattggagaaccgatgcagacagcgaa 856

                 
Query: 452 gaagcc 457
           ||||||
Sbjct: 855 gaagcc 850
to top
>dbj|AB021706.1| Arabidopsis thaliana mRNA for uncoupling protein, complete cds
          Length = 1088

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaaccaacacagacagcana 451
           |||||| ||||||||||| || || |||||||| | ||||||||| |  ||||||||  |
Sbjct: 759 agagtctcccatcattctagatttcaccacatcaattggagaaccgatgcagacagcgaa 700

                 
Query: 452 gaagcc 457
           ||||||
Sbjct: 699 gaagcc 694
to top
>gb|AY109789.1| Zea mays CL29469_-1 mRNA sequence
          Length = 655

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 396 tcacccatcattcttgacttaaccacatcgactggagaaccaa 438
           ||||||||||||||||| || |||||||| || ||||| ||||
Sbjct: 378 tcacccatcattcttgatttcaccacatccaccggagagccaa 420
to top
>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0069E11,
              complete sequence
          Length = 136959

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 18     acactttgagatctccgaacta 39
              ||||||||||||||||||||||
Sbjct: 117676 acactttgagatctccgaacta 117655
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 255      acctgctccagtgtcaagaacataatcacgttccatga 292
                |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 43222094 acctgctccagtgttaaaaacattatcacattccatga 43222057
to top
>emb|BX822677.1|CNS0A4PL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB58ZB03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1254

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 399 cccatcattcttgacttaaccacatcgactggagaacc 436
           |||||||||||||||| |||||| | ||| ||||||||
Sbjct: 891 cccatcattcttgactgaaccacgtggacaggagaacc 854
to top
>dbj|AP003228.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0020E09
          Length = 149195

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 255    acctgctccagtgtcaagaacataatcacgttccatga 292
              |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 109549 acctgctccagtgttaaaaacattatcacattccatga 109512
to top
>dbj|AB049997.1| Oryza sativa (japonica cultivar-group) OsUCP1 gene for uncoupling
            protein, complete cds
          Length = 4368

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 255  acctgctccagtgtcaagaacataatcacgttccatga 292
            |||||||||||||| || ||||| ||||| ||||||||
Sbjct: 3949 acctgctccagtgttaaaaacattatcacattccatga 3912
to top
>gb|DQ139858.1| Coreius heterodon microsatellite CH14 sequence
          Length = 358

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 gagaaaacaaatgtgcacatt 178
           |||||||||||||||||||||
Sbjct: 289 gagaaaacaaatgtgcacatt 309
to top
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome
          Length = 1995281

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    aacgccttatgtaggagaaaa 164
              |||||||||||||||||||||
Sbjct: 630843 aacgccttatgtaggagaaaa 630863
to top
>emb|AL132957.1|ATF24B22 Arabidopsis thaliana DNA chromosome 3, BAC clone F24B22
          Length = 100285

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 399   cccatcattcttgacttaacc 419
             |||||||||||||||||||||
Sbjct: 25721 cccatcattcttgacttaacc 25701
to top
>emb|BX829442.1|CNS0A1J8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB14ZC02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1237

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 392 agagtcacccatcattcttgacttaaccacatcgactggagaacc 436
           |||||| ||||||||||| || || |||||||| | |||||||||
Sbjct: 937 agagtctcccatcattctagatttcaccacatcaattggagaacc 893
to top
>gb|AF387640.1| Coxiella burnetii dTDP-glucose-4,6 dehydratase, dehydratase-like
             protein, bifunctional ADP-heptose synthetase,
             UDP-glucose-6-dehydrogenase, UDP-glucose-4-epimerase,
             TPP-dependent acetoin dehydrogenase subunit a/b fusion
             protein, GDP-4-keto-6 deoxymannose epimerase/reductase,
             GDP-D-mannose dehydratase, glycosyl transferase,
             S-adenosyl-dependent methyl transferase, pyruvate
             dehydrogenase beta subunit, pyruvate dehydrogenase alpha
             subunit, glycosyl transferase, membrane sensor protein,
             membrane sensor protein, sulfotransferase, ATP
             sulfurylase, CysQ, keto acyl carrier protein reductase,
             transport protein permease, and LPS/O-antigen export
             permease genes, complete cds; tRNA-Lys gene, complete
             sequence; and unknown genes
          Length = 38584

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   aacgccttatgtaggagaaaa 164
             |||||||||||||||||||||
Sbjct: 13648 aacgccttatgtaggagaaaa 13668
to top
>emb|Y18291.1|ATH18291 Arabidopsis thaliana ucp gene, exons 1-9
          Length = 4869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  cccatcattcttgacttaacc 419
            |||||||||||||||||||||
Sbjct: 2840 cccatcattcttgacttaacc 2820
to top
>emb|AJ002586.1|STAJ2586 Solanum tuberosum gene for mitochondrial uncoupling protein
          Length = 6428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 363  acaaaacaatcaatagtgttcttgtaggcagagtcacccatcattcttgactt 415
            ||||||||||||| ||| || ||||| || || || ||||||||||| |||||
Sbjct: 5455 acaaaacaatcaagagtatttttgtatgcggaatctcccatcattctcgactt 5403
to top
>gb|AF016656.2| Caenorhabditis elegans cosmid C35A11, complete sequence
          Length = 39947

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     ccaacacaaatttagcaacacttt 24
             |||||| |||||||||||||||||
Sbjct: 39050 ccaacaaaaatttagcaacacttt 39027
to top
>ref|XM_369753.1| Magnaporthe grisea 70-15 hypothetical protein (MG06268.4) partial
           mRNA
          Length = 1878

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 379 tgttcttgtaggcagagtca 398
           ||||||||||||||||||||
Sbjct: 613 tgttcttgtaggcagagtca 594
to top
>gb|AY601381.1| Apis mellifera AFLP marker a22.330e genomic sequence
          Length = 465

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 427 ctggagaaccaacacagaca 446
           ||||||||||||||||||||
Sbjct: 101 ctggagaaccaacacagaca 82
to top
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete
             sequence
          Length = 207863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 260   ctccagtgtcaagaacataatcac 283
             ||||||||| ||||||||||||||
Sbjct: 85107 ctccagtgtaaagaacataatcac 85084
to top
>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete
            sequence
          Length = 166747

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 260  ctccagtgtcaagaacataatcac 283
            ||||||||| ||||||||||||||
Sbjct: 2468 ctccagtgtaaagaacataatcac 2445
to top
>gb|AC024135.2| Caenorhabditis elegans cosmid C25A6, complete sequence
          Length = 2561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   ccaacacaaatttagcaacacttt 24
           |||||| |||||||||||||||||
Sbjct: 103 ccaacaaaaatttagcaacacttt 80
to top
>gb|AE014183.1| Mus musculus piebald deletion region section 11 of 11 of the complete
              sequence
          Length = 249616

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 260    ctccagtgtcaagaacataatcac 283
              ||||||||| ||||||||||||||
Sbjct: 245209 ctccagtgtaaagaacataatcac 245186
to top
>gb|AC010038.5| Drosophila melanogaster 3L BAC RP98-14O14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 172175

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ctgaacctgctccagtgtca 270
              ||||||||||||||||||||
Sbjct: 123948 ctgaacctgctccagtgtca 123967
to top
>gb|AY119525.1| Drosophila melanogaster GH15728 full insert cDNA
          Length = 6500

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  ctgaacctgctccagtgtca 270
            ||||||||||||||||||||
Sbjct: 3630 ctgaacctgctccagtgtca 3611
to top
>gb|AC093192.2| Drosophila melanogaster 3L BAC RP98-48J18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 166862

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   ctgaacctgctccagtgtca 270
             ||||||||||||||||||||
Sbjct: 70806 ctgaacctgctccagtgtca 70787
to top
>emb|BX601644.6| Zebrafish DNA sequence from clone DKEY-21O13 in linkage group 9,
             complete sequence
          Length = 217065

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   aatgtgcacattgttgttgt 186
             ||||||||||||||||||||
Sbjct: 42337 aatgtgcacattgttgttgt 42318
to top
>ref|NM_139371.1| Drosophila melanogaster CG13917-RA (CG13917), mRNA
          Length = 6482

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  ctgaacctgctccagtgtca 270
            ||||||||||||||||||||
Sbjct: 3630 ctgaacctgctccagtgtca 3611
to top
>gb|AE010180.1| Pyrococcus furiosus DSM 3638, section 55 of 173 of the complete
            genome
          Length = 12802

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 241  caaaggccttctgaacctgc 260
            ||||||||||||||||||||
Sbjct: 1129 caaaggccttctgaacctgc 1110
to top
>gb|AC153363.4| Mus musculus BAC clone RP23-5I6 from chromosome 9, complete sequence
          Length = 185444

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   tgtaggcagagtcacccatc 404
             ||||||||||||||||||||
Sbjct: 51640 tgtaggcagagtcacccatc 51659
to top
>ref|XM_215757.3| PREDICTED: Rattus norvegicus frizzled-related protein (predicted)
            (Frzb_predicted), mRNA
          Length = 3159

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  agaaaacaaatgtgcacatt 178
            ||||||||||||||||||||
Sbjct: 2735 agaaaacaaatgtgcacatt 2716
to top
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    caaaggccttctgaacctgc 260
              ||||||||||||||||||||
Sbjct: 819123 caaaggccttctgaacctgc 819104
to top
>gb|AC006609.1|AC006609 Caenorhabditis elegans clone C25A6, complete sequence
          Length = 2461

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 1   ccaacacaaatttagcaacacttt 24
           |||||| |||||||||||||||||
Sbjct: 103 ccaacaaaaatttagcaacacttt 80
to top
>gb|AE003472.1| Drosophila melanogaster chromosome 3L, section 6 of 83 of the complete
             sequence
          Length = 303191

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   ctgaacctgctccagtgtca 270
             ||||||||||||||||||||
Sbjct: 62193 ctgaacctgctccagtgtca 62174
to top
>emb|AL935037.9| Zebrafish DNA sequence from clone CH211-188E8 in linkage group 1,
             complete sequence
          Length = 141034

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   attctttagggtcttcacaa 366
             ||||||||||||||||||||
Sbjct: 56314 attctttagggtcttcacaa 56295
to top
>gb|AC122542.3| Mus musculus BAC clone RP24-572J16 from 9, complete sequence
          Length = 175952

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   tgtaggcagagtcacccatc 404
             ||||||||||||||||||||
Sbjct: 27075 tgtaggcagagtcacccatc 27056
to top
>dbj|AP005433.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-945C19, complete
              sequence
          Length = 146000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    agtttggaaggaagcctttg 326
              ||||||||||||||||||||
Sbjct: 140784 agtttggaaggaagcctttg 140765
to top
>emb|AL808117.6| Mouse DNA sequence from clone RP23-240N3 on chromosome 2, complete
              sequence
          Length = 245266

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    tgccagaggtccatcattct 351
              ||||||||||||||||||||
Sbjct: 137973 tgccagaggtccatcattct 137992


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,730,359
Number of Sequences: 3902068
Number of extensions: 4730359
Number of successful extensions: 84650
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 84412
Number of HSP's gapped (non-prelim): 237
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top