ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart57c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
2dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
3dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
4dbj|AK070440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
5ref|NM_190656.1| Oryza sativa (japonica cultivar-group), predic... 264 2e-67
6gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 143 6e-31
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
8dbj|AK107567.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
9dbj|AK072009.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 6e-31
10gb|AF390211.1| Nicotiana tabacum AER mRNA, complete cds 48 0.027
11gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 44 0.42
12emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome... 44 0.42
13emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 44 0.42
14gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC... 44 0.42
15ref|XM_479745.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
16ref|XM_466389.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
17gb|AC124507.4| Mus musculus BAC clone RP23-430B14 from chromosom... 42 1.6
18gb|BC005673.1| Mus musculus B-cell CLL/lymphoma 7C, mRNA (cDNA c... 42 1.6
19gb|AC022152.7| Homo sapiens chromosome 19 clone LLNLF-63E12, com... 42 1.6
20dbj|AK049064.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 1.6
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
23gb|AY007567.1| Mus musculus cardiotrophin-1 gene, promoter and c... 42 1.6
24dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
26dbj|AK099974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
27ref|NM_009746.2| Mus musculus B-cell CLL/lymphoma 7C (Bcl7c), mRNA 42 1.6
28ref|XM_479748.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
29ref|XM_479739.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
30ref|XM_472181.1| Oryza sativa (japonica cultivar-group), predic... 40 6.5
31gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
32gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
33gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
34gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, c... 40 6.5
35ref|XM_746299.1| Aspergillus fumigatus Af293 hypothetical protei... 40 6.5
36ref|XM_843792.1| PREDICTED: Canis familiaris similar to B-cell C... 40 6.5
37ref|XM_536901.2| PREDICTED: Canis familiaris similar to B-cell C... 40 6.5
38emb|CR536618.8| Mouse DNA sequence from clone RP24-143B12 on chr... 40 6.5
39gb|AE012201.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.5
40gb|AC020992.10| Homo sapiens chromosome 8, clone RP11-23H1, comp... 40 6.5
41gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
42dbj|AK051407.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.5
43gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.5
44gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.5
45dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
47dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
48dbj|AK110905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
49dbj|AK070381.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
50gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.5
51gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
52emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4,... 40 6.5
53gb|AC135118.3| Mus musculus BAC clone RP24-450N10 from 3, comple... 40 6.5 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  266 bits (134), Expect = 6e-68
 Identities = 179/194 (92%)
 Strand = Plus / Minus

                                                                            
Query: 287      cacgacacgtagcgcatgaacccgtcgtcgcggagcagcgccgccatggtgtccggggcg 346
                ||||||||| |  |||||||| ||  ||||||||||||||||||||||||||| ||||||
Sbjct: 36789733 cacgacacgaactgcatgaactcgctgtcgcggagcagcgccgccatggtgtcgggggcg 36789674

                                                                            
Query: 347      aggcacacctcgatgtccacgctgccgtccccggagcggcccgggaacgccgacatcttg 406
                |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 36789673 aggcacacctcgatgtccacgctgccgtccccggcgcgggcagggaacgccgacatcttg 36789614

                                                                            
Query: 407      ccgtcgaacttgttggcgcgcccgctgcgcaccgccagggggcggccccacccgaagtcg 466
                || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 36789613 ccatcgaacttgttggcgcggccgctccgcaccgcgagggggcggccccacccgaagtcg 36789554

                              
Query: 467      ttgccctcgtacat 480
                |||||||| |||||
Sbjct: 36789553 ttgccctcatacat 36789540
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>dbj|AP003442.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1096A10
          Length = 150976

 Score =  266 bits (134), Expect = 6e-68
 Identities = 179/194 (92%)
 Strand = Plus / Minus

                                                                        
Query: 287  cacgacacgtagcgcatgaacccgtcgtcgcggagcagcgccgccatggtgtccggggcg 346
            ||||||||| |  |||||||| ||  ||||||||||||||||||||||||||| ||||||
Sbjct: 5311 cacgacacgaactgcatgaactcgctgtcgcggagcagcgccgccatggtgtcgggggcg 5252

                                                                        
Query: 347  aggcacacctcgatgtccacgctgccgtccccggagcggcccgggaacgccgacatcttg 406
            |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 5251 aggcacacctcgatgtccacgctgccgtccccggcgcgggcagggaacgccgacatcttg 5192

                                                                        
Query: 407  ccgtcgaacttgttggcgcgcccgctgcgcaccgccagggggcggccccacccgaagtcg 466
            || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 5191 ccatcgaacttgttggcgcggccgctccgcaccgcgagggggcggccccacccgaagtcg 5132

                          
Query: 467  ttgccctcgtacat 480
            |||||||| |||||
Sbjct: 5131 ttgccctcatacat 5118
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>dbj|AP003279.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0529E05
          Length = 134982

 Score =  266 bits (134), Expect = 6e-68
 Identities = 179/194 (92%)
 Strand = Plus / Minus

                                                                          
Query: 287    cacgacacgtagcgcatgaacccgtcgtcgcggagcagcgccgccatggtgtccggggcg 346
              ||||||||| |  |||||||| ||  ||||||||||||||||||||||||||| ||||||
Sbjct: 116048 cacgacacgaactgcatgaactcgctgtcgcggagcagcgccgccatggtgtcgggggcg 115989

                                                                          
Query: 347    aggcacacctcgatgtccacgctgccgtccccggagcggcccgggaacgccgacatcttg 406
              |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 115988 aggcacacctcgatgtccacgctgccgtccccggcgcgggcagggaacgccgacatcttg 115929

                                                                          
Query: 407    ccgtcgaacttgttggcgcgcccgctgcgcaccgccagggggcggccccacccgaagtcg 466
              || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 115928 ccatcgaacttgttggcgcggccgctccgcaccgcgagggggcggccccacccgaagtcg 115869

                            
Query: 467    ttgccctcgtacat 480
              |||||||| |||||
Sbjct: 115868 ttgccctcatacat 115855
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>dbj|AK070440.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050J22, full
            insert sequence
          Length = 2097

 Score =  266 bits (134), Expect = 6e-68
 Identities = 179/194 (92%)
 Strand = Plus / Minus

                                                                        
Query: 287  cacgacacgtagcgcatgaacccgtcgtcgcggagcagcgccgccatggtgtccggggcg 346
            ||||||||| |  |||||||| ||  ||||||||||||||||||||||||||| ||||||
Sbjct: 1586 cacgacacgaactgcatgaactcgctgtcgcggagcagcgccgccatggtgtcgggggcg 1527

                                                                        
Query: 347  aggcacacctcgatgtccacgctgccgtccccggagcggcccgggaacgccgacatcttg 406
            |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 1526 aggcacacctcgatgtccacgctgccgtccccggcgcgggcagggaacgccgacatcttg 1467

                                                                        
Query: 407  ccgtcgaacttgttggcgcgcccgctgcgcaccgccagggggcggccccacccgaagtcg 466
            || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1466 ccatcgaacttgttggcgcggccgctccgcaccgcgagggggcggccccacccgaagtcg 1407

                          
Query: 467  ttgccctcgtacat 480
            |||||||| |||||
Sbjct: 1406 ttgccctcatacat 1393
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>ref|NM_190656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2139

 Score =  264 bits (133), Expect = 2e-67
 Identities = 169/181 (93%)
 Strand = Plus / Minus

                                                                        
Query: 300  gcatgaacccgtcgtcgcggagcagcgccgccatggtgtccggggcgaggcacacctcga 359
            |||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1438 gcatgaactcgctgtcgcggagcagcgccgccatggtgtcgggggcgaggcacacctcga 1379

                                                                        
Query: 360  tgtccacgctgccgtccccggagcggcccgggaacgccgacatcttgccgtcgaacttgt 419
            ||||||||||||||||||||| |||| | |||||||||||||||||||| ||||||||||
Sbjct: 1378 tgtccacgctgccgtccccggcgcgggcagggaacgccgacatcttgccatcgaacttgt 1319

                                                                        
Query: 420  tggcgcgcccgctgcgcaccgccagggggcggccccacccgaagtcgttgccctcgtaca 479
            ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 1318 tggcgcggccgctccgcaccgcgagggggcggccccacccgaagtcgttgccctcataca 1259

             
Query: 480  t 480
            |
Sbjct: 1258 t 1258
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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                         
Query: 329   gccatggtgtccggggcgaggcacacctcgatgtccacgctgccgtccccggagcggccc 388
             ||||||||||| || |||||||| | ||||| ||| |||||||||||||| |   ||| |
Sbjct: 14541 gccatggtgtcgggcgcgaggcaaaactcgacgtcgacgctgccgtccccagcctggctc 14600

                                                                         
Query: 389   gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctgcgcaccgccaggggg 448
             |||||||||||||||||||||||||||||||||||||||||||| ||||| || |  |  
Sbjct: 14601 gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctccgcacggcgatcgcc 14660

                                             
Query: 449   cggccccacccgaagtcgttgccctcgtacat 480
             | ||||||||||||||||||||| ||||||||
Sbjct: 14661 ctgccccacccgaagtcgttgccgtcgtacat 14692
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 329      gccatggtgtccggggcgaggcacacctcgatgtccacgctgccgtccccggagcggccc 388
                ||||||||||| || |||||||| | ||||| ||| |||||||||||||| |   ||| |
Sbjct: 21895327 gccatggtgtcgggcgcgaggcaaaactcgacgtcgacgctgccgtccccagcctggctc 21895386

                                                                            
Query: 389      gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctgcgcaccgccaggggg 448
                |||||||||||||||||||||||||||||||||||||||||||| ||||| || |  |  
Sbjct: 21895387 gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctccgcacggcgatcgcc 21895446

                                                
Query: 449      cggccccacccgaagtcgttgccctcgtacat 480
                | ||||||||||||||||||||| ||||||||
Sbjct: 21895447 ctgccccacccgaagtcgttgccgtcgtacat 21895478
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>dbj|AK107567.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C10, full
            insert sequence
          Length = 1886

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Minus

                                                                        
Query: 329  gccatggtgtccggggcgaggcacacctcgatgtccacgctgccgtccccggagcggccc 388
            ||||||||||| || |||||||| | ||||| ||| |||||||||||||| |   ||| |
Sbjct: 1491 gccatggtgtcgggcgcgaggcaaaactcgacgtcgacgctgccgtccccagcctggctc 1432

                                                                        
Query: 389  gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctgcgcaccgccaggggg 448
            |||||||||||||||||||||||||||||||||||||||||||| ||||| || |  |  
Sbjct: 1431 gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctccgcacggcgatcgcc 1372

                                            
Query: 449  cggccccacccgaagtcgttgccctcgtacat 480
            | ||||||||||||||||||||| ||||||||
Sbjct: 1371 ctgccccacccgaagtcgttgccgtcgtacat 1340
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>dbj|AK072009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104O15, full
            insert sequence
          Length = 1883

 Score =  143 bits (72), Expect = 6e-31
 Identities = 132/152 (86%)
 Strand = Plus / Minus

                                                                        
Query: 329  gccatggtgtccggggcgaggcacacctcgatgtccacgctgccgtccccggagcggccc 388
            ||||||||||| || |||||||| | ||||| ||| |||||||||||||| |   ||| |
Sbjct: 1492 gccatggtgtcgggcgcgaggcaaaactcgacgtcgacgctgccgtccccagcctggctc 1433

                                                                        
Query: 389  gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctgcgcaccgccaggggg 448
            |||||||||||||||||||||||||||||||||||||||||||| ||||| || |  |  
Sbjct: 1432 gggaacgccgacatcttgccgtcgaacttgttggcgcgcccgctccgcacggcgatcgcc 1373

                                            
Query: 449  cggccccacccgaagtcgttgccctcgtacat 480
            | ||||||||||||||||||||| ||||||||
Sbjct: 1372 ctgccccacccgaagtcgttgccgtcgtacat 1341
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>gb|AF390211.1| Nicotiana tabacum AER mRNA, complete cds
          Length = 1652

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 437  accgccagggggcggccccacccgaagtcgtt 468
            ||||||||||| |||||||||||||| |||||
Sbjct: 1290 accgccaggggccggccccacccgaaatcgtt 1259
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 420     tggcgcgcccgctgcgcaccgc 441
               ||||||||||||||||||||||
Sbjct: 2088917 tggcgcgcccgctgcgcaccgc 2088896
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>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13
          Length = 346186

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 420   tggcgcgcccgctgcgcaccgc 441
             ||||||||||||||||||||||
Sbjct: 12988 tggcgcgcccgctgcgcaccgc 12967
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14
          Length = 291050

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 420    tggcgcgcccgctgcgcaccgc 441
              ||||||||||||||||||||||
Sbjct: 167908 tggcgcgcccgctgcgcaccgc 167887
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>gb|AF267176.1|AF267176 Pyricularia grisea chromosome 7 clone BAC 6J18, genomic sequence
          Length = 111865

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 241   ggacgcacggacgcggcaaggcatcg 266
             ||||| ||||||||||||||||||||
Sbjct: 58733 ggacgtacggacgcggcaaggcatcg 58758
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>ref|XM_479745.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 452  ccccacccgaagtcgttgccc 472
            |||||||||||||||||||||
Sbjct: 1211 ccccacccgaagtcgttgccc 1191
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>ref|XM_466389.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2633

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 cggagcagcgccgccatggtgtccg 341
           ||||||||||||||| |||||||||
Sbjct: 434 cggagcagcgccgccttggtgtccg 458
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>gb|AC124507.4| Mus musculus BAC clone RP23-430B14 from chromosome 7, complete sequence
          Length = 204278

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    ccgtccccggagcggcccggg 391
              |||||||||||||||||||||
Sbjct: 169340 ccgtccccggagcggcccggg 169360
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>gb|BC005673.1| Mus musculus B-cell CLL/lymphoma 7C, mRNA (cDNA clone MGC:11464
           IMAGE:3153237), complete cds
          Length = 981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccgtccccggagcggcccggg 391
           |||||||||||||||||||||
Sbjct: 47  ccgtccccggagcggcccggg 27
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>gb|AC022152.7| Homo sapiens chromosome 19 clone LLNLF-63E12, complete sequence
          Length = 42869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   cctcctgcacagtgcacacat 176
             |||||||||||||||||||||
Sbjct: 27856 cctcctgcacagtgcacacat 27876
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>dbj|AK049064.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230096E12 product:B-cell
           CLL/lymphoma 7C, full insert sequence
          Length = 4356

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccgtccccggagcggcccggg 391
           |||||||||||||||||||||
Sbjct: 67  ccgtccccggagcggcccggg 47
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 452    ccccacccgaagtcgttgccc 472
              |||||||||||||||||||||
Sbjct: 626612 ccccacccgaagtcgttgccc 626632



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 452    ccccacccgaagtcgttgccc 472
              |||||||||||||||||||||
Sbjct: 604518 ccccacccgaagtcgttgccc 604538



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ccccacccgaagtcgttgcc 471
              ||||||||||||||||||||
Sbjct: 649803 ccccacccgaagtcgttgcc 649822



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ccccacccgaagtcgttgcc 471
              ||||||||||||||||||||
Sbjct: 646734 ccccacccgaagtcgttgcc 646753



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 403    cttgccgtcgaacttgttggcgcgcccgctgcgcac 438
              |||||||||||||||||| ||||  ||||| |||||
Sbjct: 646685 cttgccgtcgaacttgttcgcgccgccgctccgcac 646720



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ccccacccgaagtcgttgcc 471
              ||||||||||||||||||||
Sbjct: 590392 ccccacccgaagtcgttgcc 590411
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 317      cggagcagcgccgccatggtgtccg 341
                ||||||||||||||| |||||||||
Sbjct: 22097314 cggagcagcgccgccttggtgtccg 22097338
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>gb|AY007567.1| Mus musculus cardiotrophin-1 gene, promoter and complete cds
          Length = 9713

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 371 ccgtccccggagcggcccggg 391
           |||||||||||||||||||||
Sbjct: 146 ccgtccccggagcggcccggg 166
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>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0703B01
          Length = 137445

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 317   cggagcagcgccgccatggtgtccg 341
             ||||||||||||||| |||||||||
Sbjct: 71213 cggagcagcgccgccttggtgtccg 71237
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0498H04
          Length = 151046

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ccccacccgaagtcgttgccc 472
             |||||||||||||||||||||
Sbjct: 53990 ccccacccgaagtcgttgccc 54010



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ccccacccgaagtcgttgccc 472
             |||||||||||||||||||||
Sbjct: 31896 ccccacccgaagtcgttgccc 31916



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ccccacccgaagtcgttgcc 471
             ||||||||||||||||||||
Sbjct: 77181 ccccacccgaagtcgttgcc 77200



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ccccacccgaagtcgttgcc 471
             ||||||||||||||||||||
Sbjct: 74112 ccccacccgaagtcgttgcc 74131



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 403   cttgccgtcgaacttgttggcgcgcccgctgcgcac 438
             |||||||||||||||||| ||||  ||||| |||||
Sbjct: 74063 cttgccgtcgaacttgttcgcgccgccgctccgcac 74098



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   ccccacccgaagtcgttgcc 471
             ||||||||||||||||||||
Sbjct: 17770 ccccacccgaagtcgttgcc 17789
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>dbj|AK099974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128D08, full
           insert sequence
          Length = 2633

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 317 cggagcagcgccgccatggtgtccg 341
           ||||||||||||||| |||||||||
Sbjct: 434 cggagcagcgccgccttggtgtccg 458
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>ref|NM_009746.2| Mus musculus B-cell CLL/lymphoma 7C (Bcl7c), mRNA
          Length = 981

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 371 ccgtccccggagcggcccggg 391
           |||||||||||||||||||||
Sbjct: 47  ccgtccccggagcggcccggg 27
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>ref|XM_479748.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1625

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccccacccgaagtcgttgcc 471
            ||||||||||||||||||||
Sbjct: 1246 ccccacccgaagtcgttgcc 1227
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>ref|XM_479739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1835

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccccacccgaagtcgttgcc 471
            ||||||||||||||||||||
Sbjct: 1300 ccccacccgaagtcgttgcc 1281
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>ref|XM_472181.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccccacccgaagtcgttgcc 471
            ||||||||||||||||||||
Sbjct: 1151 ccccacccgaagtcgttgcc 1132
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   cccgtcgtcgcggagcagcg 326
             ||||||||||||||||||||
Sbjct: 66697 cccgtcgtcgcggagcagcg 66716
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>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0008E02, complete sequence
          Length = 152974

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  gtcgcggagcagcgccgcca 332
            ||||||||||||||||||||
Sbjct: 1099 gtcgcggagcagcgccgcca 1118
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>gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0031M14, complete sequence
          Length = 49269

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  gtcgcggagcagcgccgcca 332
            ||||||||||||||||||||
Sbjct: 7928 gtcgcggagcagcgccgcca 7909
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>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome
          Length = 134431

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134408 acgcacggacgcacggacgc 134389



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134294 acgcacggacgcacggacgc 134275



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134233 acgcacggacgcacggacgc 134214



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134172 acgcacggacgcacggacgc 134153



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134111 acgcacggacgcacggacgc 134092



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    acgcacggacgcacggacgc 254
              ||||||||||||||||||||
Sbjct: 134050 acgcacggacgcacggacgc 134031



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 382 acgcacggacgcacggacgc 401



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 321 acgcacggacgcacggacgc 340



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 260 acgcacggacgcacggacgc 279



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 199 acgcacggacgcacggacgc 218



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 138 acgcacggacgcacggacgc 157



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 24  acgcacggacgcacggacgc 43
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>ref|XM_746299.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g14400) partial
            mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 370  gccgtccccggagcggcccg 389
            ||||||||||||||||||||
Sbjct: 1742 gccgtccccggagcggcccg 1723
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>ref|XM_843792.1| PREDICTED: Canis familiaris similar to B-cell CLL/lymphoma 7C,
           transcript variant 3 (LOC479774), mRNA
          Length = 968

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 ccgtccccggagcggcccgg 390
           ||||||||||||||||||||
Sbjct: 48  ccgtccccggagcggcccgg 29
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>ref|XM_536901.2| PREDICTED: Canis familiaris similar to B-cell CLL/lymphoma 7C,
           transcript variant 1 (LOC479774), mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 ccgtccccggagcggcccgg 390
           ||||||||||||||||||||
Sbjct: 48  ccgtccccggagcggcccgg 29
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>emb|CR536618.8| Mouse DNA sequence from clone RP24-143B12 on chromosome X, complete
            sequence
          Length = 15529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 235  acgcacggacgcacggacgc 254
            ||||||||||||||||||||
Sbjct: 3652 acgcacggacgcacggacgc 3671
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>gb|AE012201.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 109
            of 460 of the complete genome
          Length = 10790

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 252  cgcggcaaggcatcgatcac 271
            ||||||||||||||||||||
Sbjct: 8321 cgcggcaaggcatcgatcac 8302
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>gb|AC020992.10| Homo sapiens chromosome 8, clone RP11-23H1, complete sequence
          Length = 129413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 7      cttgacaaccttattttatttcca 30
              |||||||||||||||| |||||||
Sbjct: 100091 cttgacaaccttatttaatttcca 100068
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>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence
          Length = 42748

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 307  cccgtcgtcgcggagcagcg 326
            ||||||||||||||||||||
Sbjct: 2495 cccgtcgtcgcggagcagcg 2476
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>dbj|AK051407.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130046M06 product:ERYTHROID
           DIFFERENTIATION REGULATOR (FRAGMENT) homolog [Mus
           musculus], full insert sequence
          Length = 1272

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 acgcacggacgcacggacgc 254
           ||||||||||||||||||||
Sbjct: 772 acgcacggacgcacggacgc 791
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 252     cgcggcaaggcatcgatcac 271
               ||||||||||||||||||||
Sbjct: 3836828 cgcggcaaggcatcgatcac 3836847
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 192     tgacgacatgccatggcggc 211
               ||||||||||||||||||||
Sbjct: 3361453 tgacgacatgccatggcggc 3361434
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 452      ccccacccgaagtcgttgcc 471
                ||||||||||||||||||||
Sbjct: 18268426 ccccacccgaagtcgttgcc 18268445
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     gtcgcggagcagcgccgcca 332
               ||||||||||||||||||||
Sbjct: 9310698 gtcgcggagcagcgccgcca 9310717



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     cccgtcgtcgcggagcagcg 326
               ||||||||||||||||||||
Sbjct: 3248288 cccgtcgtcgcggagcagcg 3248269
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ccccacccgaagtcgttgcc 471
              ||||||||||||||||||||
Sbjct: 180352 ccccacccgaagtcgttgcc 180371
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>dbj|AK110905.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-B07, full
            insert sequence
          Length = 1835

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccccacccgaagtcgttgcc 471
            ||||||||||||||||||||
Sbjct: 1300 ccccacccgaagtcgttgcc 1281
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>dbj|AK070381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054J24, full
            insert sequence
          Length = 1624

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 452  ccccacccgaagtcgttgcc 471
            ||||||||||||||||||||
Sbjct: 1244 ccccacccgaagtcgttgcc 1225
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 426     gcccgctgcgcaccgccagg 445
               ||||||||||||||||||||
Sbjct: 2376989 gcccgctgcgcaccgccagg 2377008
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     gtcgcggagcagcgccgcca 332
               ||||||||||||||||||||
Sbjct: 9382395 gtcgcggagcagcgccgcca 9382414



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     cccgtcgtcgcggagcagcg 326
               ||||||||||||||||||||
Sbjct: 3256993 cccgtcgtcgcggagcagcg 3256974
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>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17,
              complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    ccccacccgaagtcgttgcc 471
              ||||||||||||||||||||
Sbjct: 104100 ccccacccgaagtcgttgcc 104119
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>gb|AC135118.3| Mus musculus BAC clone RP24-450N10 from 3, complete sequence
          Length = 188353

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcccacaatccatccatctc 58
             ||||||||||||||||||||
Sbjct: 83683 tcccacaatccatccatctc 83664


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,680,939
Number of Sequences: 3902068
Number of extensions: 3680939
Number of successful extensions: 60421
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59711
Number of HSP's gapped (non-prelim): 710
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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